RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 VPS25Q9BRG1 176 aa5.43□□□□□ -1.54
NR1I3-220ENST00000505005 A0A0G2JQZ4 141 aa5.42□□□□□ -1.54
NR1I3-220ENST00000505005 A0A1B0GV72 72 aa5.42□□□□□ -1.54
NR1I3-220ENST00000505005 LINC00846Q9NV44 126 aa5.42□□□□□ -1.54
NR1I3-220ENST00000505005 A0A1W2PNM2 257 aa5.41□□□□□ -1.54
NR1I3-220ENST00000505005 C9orf92A6NGG3 77 aa5.4□□□□□ -1.54
NR1I3-220ENST00000505005 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
NR1I3-220ENST00000505005 LPAP08519 4548 aa5.4□□□□□ -1.55
NR1I3-220ENST00000505005 NDUFB1O75438 58 aa5.38□□□□□ -1.55
NR1I3-220ENST00000505005 CXCL6P80162 114 aa5.38□□□□□ -1.55
NR1I3-220ENST00000505005 ATP11AUNQ6ZP68 121 aa5.38□□□□□ -1.55
NR1I3-220ENST00000505005 Q6ZVQ6 151 aa5.38□□□□□ -1.55
NR1I3-220ENST00000505005 SIGMAR1Q99720 223 aa5.38□□□□□ -1.55
NR1I3-220ENST00000505005 IGKV4-1P06312 121 aa5.37□□□□□ -1.55
NR1I3-220ENST00000505005 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
NR1I3-220ENST00000505005 NREPQ16612 68 aa5.37□□□□□ -1.55
NR1I3-220ENST00000505005 C8orf87E5RJ46 101 aa5.36□□□□□ -1.55
NR1I3-220ENST00000505005 LINC00313P59037 77 aa5.36□□□□□ -1.55
NR1I3-220ENST00000505005 KRTAP19-4Q3LI73 84 aa5.36□□□□□ -1.55
NR1I3-220ENST00000505005 Q75L30 129 aa5.36□□□□□ -1.55
NR1I3-220ENST00000505005 Q96NJ1 140 aa5.34□□□□□ -1.55
NR1I3-220ENST00000505005 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
NR1I3-220ENST00000505005 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
NR1I3-220ENST00000505005 MT-ATP8P03928 68 aa5.32□□□□□ -1.56
NR1I3-220ENST00000505005 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
NR1I3-220ENST00000505005 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
NR1I3-220ENST00000505005 RNF213Q63HN8 5207 aa5.31□□□□□ -1.56
NR1I3-220ENST00000505005 BPY2O14599 106 aa5.31□□□□□ -1.56
NR1I3-220ENST00000505005 PCOTHQ58A44 107 aa5.31□□□□□ -1.56
NR1I3-220ENST00000505005 C20orf166-AS1Q96NR2 134 aa5.3□□□□□ -1.56
NR1I3-220ENST00000505005 A0A1B0GVX0 72 aa5.29□□□□□ -1.56
NR1I3-220ENST00000505005 A8MUU9 505 aa5.28□□□□□ -1.56
NR1I3-220ENST00000505005 IGHV6-1A0A0B4J1U7 121 aa5.27□□□□□ -1.57
NR1I3-220ENST00000505005 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
NR1I3-220ENST00000505005 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
NR1I3-220ENST00000505005 A8MWP4 228 aa5.26□□□□□ -1.57
NR1I3-220ENST00000505005 KRTAP23-1A1A580 65 aa5.24□□□□□ -1.57
NR1I3-220ENST00000505005 DSCR10P59022 87 aa5.24□□□□□ -1.57
NR1I3-220ENST00000505005 DEFB116Q30KQ4 102 aa5.24□□□□□ -1.57
NR1I3-220ENST00000505005 HIST1H4AP62805 103 aaKnown RBP5.23□□□□□ -1.57
NR1I3-220ENST00000505005 MUC2Q02817 5179 aa5.22□□□□□ -1.57
NR1I3-220ENST00000505005 PRR15Q8IV56 129 aa5.22□□□□□ -1.57
NR1I3-220ENST00000505005 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
NR1I3-220ENST00000505005 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
NR1I3-220ENST00000505005 K7EQZ3 153 aa5.2□□□□□ -1.58
NR1I3-220ENST00000505005 ATOX1O00244 68 aa5.2□□□□□ -1.58
NR1I3-220ENST00000505005 COX6B2Q6YFQ2 88 aa5.2□□□□□ -1.58
NR1I3-220ENST00000505005 SMIM20Q8N5G0 67 aa5.2□□□□□ -1.58
NR1I3-220ENST00000505005 C8orf17Q9NRJ1 99 aa5.19□□□□□ -1.58
NR1I3-220ENST00000505005 A0A087WVE0 104 aa5.18□□□□□ -1.58
NR1I3-220ENST00000505005 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
NR1I3-220ENST00000505005 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
NR1I3-220ENST00000505005 TMEM254Q8TBM7 123 aa5.18□□□□□ -1.58
NR1I3-220ENST00000505005 HCG22E2RYF7 251 aa5.17□□□□□ -1.58
NR1I3-220ENST00000505005 RBM12B-AS1Q9P1G2 102 aa5.17□□□□□ -1.58
NR1I3-220ENST00000505005 Q8N9L7 120 aa5.16□□□□□ -1.58
NR1I3-220ENST00000505005 MRPL34Q9BQ48 92 aaKnown RBP5.16□□□□□ -1.58
NR1I3-220ENST00000505005 KRTAP4-1Q9BYQ7 146 aa5.16□□□□□ -1.58
NR1I3-220ENST00000505005 hDV103S1A0JD37 113 aa5.15□□□□□ -1.59
NR1I3-220ENST00000505005 ZCCHC13Q8WW36 166 aaKnown RBP5.15□□□□□ -1.59
NR1I3-220ENST00000505005 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
NR1I3-220ENST00000505005 CASC2Q6XLA1 102 aa5.13□□□□□ -1.59
NR1I3-220ENST00000505005 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
NR1I3-220ENST00000505005 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
NR1I3-220ENST00000505005 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
NR1I3-220ENST00000505005 NDUFS5O43920 106 aa5.11□□□□□ -1.59
NR1I3-220ENST00000505005 SERP2Q8N6R1 65 aa5.11□□□□□ -1.59
NR1I3-220ENST00000505005 KRTAP3-1Q9BYR8 98 aa5.11□□□□□ -1.59
NR1I3-220ENST00000505005 WFDC13Q8IUB5 93 aa5.1□□□□□ -1.59
NR1I3-220ENST00000505005 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
NR1I3-220ENST00000505005 FAM236DA0A1B0GTK5 79 aa5.09□□□□□ -1.59
NR1I3-220ENST00000505005 M0R2T5 61 aa5.09□□□□□ -1.59
NR1I3-220ENST00000505005 FAM236CP0DP71 79 aa5.09□□□□□ -1.59
NR1I3-220ENST00000505005 OCR1Q9BZK8 76 aa5.09□□□□□ -1.59
NR1I3-220ENST00000505005 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.6
NR1I3-220ENST00000505005 UQCRQO14949 82 aa5.08□□□□□ -1.6
NR1I3-220ENST00000505005 PCP4P48539 62 aa5.08□□□□□ -1.6
NR1I3-220ENST00000505005 COX7CP15954 63 aa5.07□□□□□ -1.6
NR1I3-220ENST00000505005 KRTAP19-1Q8IUB9 90 aa5.07□□□□□ -1.6
NR1I3-220ENST00000505005 SPINK7P58062 85 aa5.06□□□□□ -1.6
NR1I3-220ENST00000505005 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
NR1I3-220ENST00000505005 H3BPC8 53 aa5.05□□□□□ -1.6
NR1I3-220ENST00000505005 C5orf47Q569G3 176 aa5.05□□□□□ -1.6
NR1I3-220ENST00000505005 KRTAP19-2Q3LHN2 52 aa5.04□□□□□ -1.6
NR1I3-220ENST00000505005 MT1HP80294 61 aa5.03□□□□□ -1.6
NR1I3-220ENST00000505005 KRTAP4-12Q9BQ66 201 aa5.03□□□□□ -1.6
NR1I3-220ENST00000505005 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
NR1I3-220ENST00000505005 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
NR1I3-220ENST00000505005 KLKP1Q107X0 134 aa5.01□□□□□ -1.61
NR1I3-220ENST00000505005 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
NR1I3-220ENST00000505005 HRES1P13985 223 aa5□□□□□ -1.61
NR1I3-220ENST00000505005 MP68P56378 58 aa5□□□□□ -1.61
NR1I3-220ENST00000505005 NDUFC1O43677 76 aa4.98□□□□□ -1.61
NR1I3-220ENST00000505005 H0Y9P7 68 aa4.96□□□□□ -1.62
NR1I3-220ENST00000505005 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
NR1I3-220ENST00000505005 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
NR1I3-220ENST00000505005 LOC101927531A0A1B0GV80 90 aa4.95□□□□□ -1.62
NR1I3-220ENST00000505005 CCDC179H3BU77 68 aa4.95□□□□□ -1.62
NR1I3-220ENST00000505005 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
NR1I3-220ENST00000505005 KRTAP9-2Q9BYQ4 174 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms