RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
TPM3-217ENST00000504663 IGKV3D-7A0A0C4DH55 119 aa5.91□□□□□ -1.46
TPM3-217ENST00000504663 NREPQ16612 68 aa5.91□□□□□ -1.46
TPM3-217ENST00000504663 SPINK1P00995 79 aa5.9□□□□□ -1.46
TPM3-217ENST00000504663 DEFB116Q30KQ4 102 aa5.9□□□□□ -1.46
TPM3-217ENST00000504663 ATP5EP2Q5VTU8 51 aa5.9□□□□□ -1.46
TPM3-217ENST00000504663 SS18L2Q9UHA2 77 aa5.9□□□□□ -1.46
TPM3-217ENST00000504663 CXCL6P80162 114 aa5.89□□□□□ -1.47
TPM3-217ENST00000504663 C1orf195Q5TG92 126 aa5.89□□□□□ -1.47
TPM3-217ENST00000504663 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
TPM3-217ENST00000504663 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
TPM3-217ENST00000504663 OXTP01178 125 aa5.88□□□□□ -1.47
TPM3-217ENST00000504663 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
TPM3-217ENST00000504663 Q8N9L7 120 aa5.87□□□□□ -1.47
TPM3-217ENST00000504663 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
TPM3-217ENST00000504663 K7EQZ3 153 aa5.86□□□□□ -1.47
TPM3-217ENST00000504663 BPY2O14599 106 aa5.86□□□□□ -1.47
TPM3-217ENST00000504663 LIMD2Q9BT23 127 aa5.86□□□□□ -1.47
TPM3-217ENST00000504663 A0A087WVE0 104 aa5.84□□□□□ -1.47
TPM3-217ENST00000504663 A8MWP4 228 aa5.84□□□□□ -1.47
TPM3-217ENST00000504663 IMUPQ9GZP8 106 aa5.83□□□□□ -1.48
TPM3-217ENST00000504663 J3KT08 172 aa5.82□□□□□ -1.48
TPM3-217ENST00000504663 HIST1H4AP62805 103 aaKnown RBP5.82□□□□□ -1.48
TPM3-217ENST00000504663 PRR15Q8IV56 129 aa5.82□□□□□ -1.48
TPM3-217ENST00000504663 DMBT1Q9UGM3 2413 aaPredicted RBP5.82□□□□□ -1.48
TPM3-217ENST00000504663 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
TPM3-217ENST00000504663 NOTCH2NLQ7Z3S9 236 aa5.81□□□□□ -1.48
TPM3-217ENST00000504663 MPLKIPQ8TAP9 179 aa5.81□□□□□ -1.48
TPM3-217ENST00000504663 MMP24-AS1A0A0U1RRL7 71 aa5.8□□□□□ -1.48
TPM3-217ENST00000504663 A0A1B0GVX0 72 aa5.8□□□□□ -1.48
TPM3-217ENST00000504663 RETNLBQ9BQ08 111 aa5.8□□□□□ -1.48
TPM3-217ENST00000504663 KRTAP16-1A8MUX0 517 aa5.76□□□□□ -1.49
TPM3-217ENST00000504663 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
TPM3-217ENST00000504663 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
TPM3-217ENST00000504663 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
TPM3-217ENST00000504663 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
TPM3-217ENST00000504663 IGHV6-1A0A0B4J1U7 121 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 HCG22E2RYF7 251 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 KRTAP9-9Q9BYP9 154 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 LPAP08519 4548 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 HERC1Q15751 4861 aa5.74□□□□□ -1.49
TPM3-217ENST00000504663 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
TPM3-217ENST00000504663 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
TPM3-217ENST00000504663 NDUFB1O75438 58 aa5.72□□□□□ -1.49
TPM3-217ENST00000504663 SCGB1A1P11684 91 aa5.72□□□□□ -1.49
TPM3-217ENST00000504663 C8orf87E5RJ46 101 aa5.71□□□□□ -1.5
TPM3-217ENST00000504663 FP248Q71RG6 208 aaPredicted RBP5.71□□□□□ -1.5
TPM3-217ENST00000504663 WFDC13Q8IUB5 93 aa5.71□□□□□ -1.5
TPM3-217ENST00000504663 MUC17Q685J3 4493 aa5.7□□□□□ -1.5
TPM3-217ENST00000504663 TMEM254Q8TBM7 123 aa5.7□□□□□ -1.5
TPM3-217ENST00000504663 hDV103S1A0JD37 113 aa5.69□□□□□ -1.5
TPM3-217ENST00000504663 CASC2Q6XLA1 102 aa5.69□□□□□ -1.5
TPM3-217ENST00000504663 LINC00313P59037 77 aa5.68□□□□□ -1.5
TPM3-217ENST00000504663 KRTAP13-3Q3SY46 172 aa5.68□□□□□ -1.5
TPM3-217ENST00000504663 OCR1Q9BZK8 76 aa5.68□□□□□ -1.5
TPM3-217ENST00000504663 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
TPM3-217ENST00000504663 LRP2P98164 4655 aa5.67□□□□□ -1.5
TPM3-217ENST00000504663 IGLV7-46A0A075B6I9 117 aa5.66□□□□□ -1.5
TPM3-217ENST00000504663 Q8N9P0 234 aaPredicted RBP5.66□□□□□ -1.5
TPM3-217ENST00000504663 C9orf92A6NGG3 77 aa5.65□□□□□ -1.5
TPM3-217ENST00000504663 ATOX1O00244 68 aa5.64□□□□□ -1.51
TPM3-217ENST00000504663 A8MUU9 505 aa5.63□□□□□ -1.51
TPM3-217ENST00000504663 C20orf166-AS1Q96NR2 134 aa5.63□□□□□ -1.51
TPM3-217ENST00000504663 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
TPM3-217ENST00000504663 PRR4Q16378 134 aa5.61□□□□□ -1.51
TPM3-217ENST00000504663 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
TPM3-217ENST00000504663 TRAV7A0A075B6U4 112 aa5.6□□□□□ -1.51
TPM3-217ENST00000504663 Q5W150 140 aa5.59□□□□□ -1.51
TPM3-217ENST00000504663 SERP2Q8N6R1 65 aa5.59□□□□□ -1.51
TPM3-217ENST00000504663 ANAPC13Q9BS18 74 aa5.57□□□□□ -1.52
TPM3-217ENST00000504663 COX7CP15954 63 aa5.56□□□□□ -1.52
TPM3-217ENST00000504663 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
TPM3-217ENST00000504663 UQCRQO14949 82 aa5.55□□□□□ -1.52
TPM3-217ENST00000504663 RPL37P61927 97 aaKnown RBP5.55□□□□□ -1.52
TPM3-217ENST00000504663 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
TPM3-217ENST00000504663 ZCCHC13Q8WW36 166 aaKnown RBP5.54□□□□□ -1.52
TPM3-217ENST00000504663 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
TPM3-217ENST00000504663 TP53AIP1Q9HCN2 124 aa5.54□□□□□ -1.52
TPM3-217ENST00000504663 NDUFS5O43920 106 aa5.53□□□□□ -1.52
TPM3-217ENST00000504663 CYSTM1Q9H1C7 97 aa5.53□□□□□ -1.52
TPM3-217ENST00000504663 TRAV22A0A0B4J277 110 aa5.52□□□□□ -1.53
TPM3-217ENST00000504663 A0A0U1RQV1 116 aa5.51□□□□□ -1.53
TPM3-217ENST00000504663 H0Y9P7 68 aa5.51□□□□□ -1.53
TPM3-217ENST00000504663 KRTAP19-4Q3LI73 84 aa5.5□□□□□ -1.53
TPM3-217ENST00000504663 C5orf47Q569G3 176 aa5.49□□□□□ -1.53
TPM3-217ENST00000504663 KLKP1Q107X0 134 aa5.48□□□□□ -1.53
TPM3-217ENST00000504663 C20orf197Q8N268 126 aa5.48□□□□□ -1.53
TPM3-217ENST00000504663 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
TPM3-217ENST00000504663 SNURFQ9Y675 71 aa5.46□□□□□ -1.54
TPM3-217ENST00000504663 H3BPC8 53 aa5.45□□□□□ -1.54
TPM3-217ENST00000504663 LINC00208Q96KT6 92 aa5.45□□□□□ -1.54
TPM3-217ENST00000504663 MP68P56378 58 aa5.44□□□□□ -1.54
TPM3-217ENST00000504663 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
TPM3-217ENST00000504663 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
TPM3-217ENST00000504663 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
TPM3-217ENST00000504663 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
TPM3-217ENST00000504663 KRTAP4-1Q9BYQ7 146 aa5.43□□□□□ -1.54
TPM3-217ENST00000504663 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms