RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 PSORS1C2Q9UIG4 136 aa7.8□□□□□ -1.16
SMTN-221ENST00000504335 PDZD2O15018 2839 aa7.8□□□□□ -1.16
SMTN-221ENST00000504335 TEP1Q99973 2627 aaKnown RBP7.79□□□□□ -1.16
SMTN-221ENST00000504335 IGKV2D-30A0A075B6S6 120 aa7.79□□□□□ -1.16
SMTN-221ENST00000504335 ZNF469Q96JG9 3925 aaPredicted RBP7.78□□□□□ -1.16
SMTN-221ENST00000504335 MTORP42345 2549 aa7.77□□□□□ -1.17
SMTN-221ENST00000504335 KRTAP1-1Q07627 177 aa7.77□□□□□ -1.17
SMTN-221ENST00000504335 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
SMTN-221ENST00000504335 A0A1B0GU33 70 aa7.76□□□□□ -1.17
SMTN-221ENST00000504335 SMR3AQ99954 134 aa7.74□□□□□ -1.17
SMTN-221ENST00000504335 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
SMTN-221ENST00000504335 ANAPC11Q9NYG5 84 aa7.73□□□□□ -1.17
SMTN-221ENST00000504335 ITPR3Q14573 2671 aa7.73□□□□□ -1.17
SMTN-221ENST00000504335 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
SMTN-221ENST00000504335 ACANP16112 2415 aa7.72□□□□□ -1.17
SMTN-221ENST00000504335 SPINK1P00995 79 aa7.71□□□□□ -1.17
SMTN-221ENST00000504335 SRRM2Q9UQ35 2752 aaKnown RBP7.7□□□□□ -1.18
SMTN-221ENST00000504335 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
SMTN-221ENST00000504335 WWC2-AS2Q96NR7 200 aa7.69□□□□□ -1.18
SMTN-221ENST00000504335 FLNAP21333 2647 aaKnown RBP7.69□□□□□ -1.18
SMTN-221ENST00000504335 SETD2Q9BYW2 2564 aaPredicted RBP7.68□□□□□ -1.18
SMTN-221ENST00000504335 FLG2Q5D862 2391 aaPredicted RBP7.68□□□□□ -1.18
SMTN-221ENST00000504335 C14orf177Q52M58 125 aa7.66□□□□□ -1.18
SMTN-221ENST00000504335 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.66□□□□□ -1.18
SMTN-221ENST00000504335 HIVEP1P15822 2718 aa7.66□□□□□ -1.18
SMTN-221ENST00000504335 TPRXLQ17RH7 258 aa7.62□□□□□ -1.19
SMTN-221ENST00000504335 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
SMTN-221ENST00000504335 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
SMTN-221ENST00000504335 ANK3Q12955 4377 aaKnown RBP7.59□□□□□ -1.19
SMTN-221ENST00000504335 NBDYA0A0U1RRE5 68 aa7.56□□□□□ -1.2
SMTN-221ENST00000504335 SEC61BP60468 96 aaKnown RBP7.54□□□□□ -1.2
SMTN-221ENST00000504335 CSMD3Q7Z407 3707 aa7.53□□□□□ -1.2
SMTN-221ENST00000504335 Q8N1X5 172 aa7.51□□□□□ -1.21
SMTN-221ENST00000504335 DNAH1Q9P2D7 4330 aa7.48□□□□□ -1.21
SMTN-221ENST00000504335 RPL37P61927 97 aaKnown RBP7.48□□□□□ -1.21
SMTN-221ENST00000504335 CIRBP-AS1Q8TBR5 109 aa7.47□□□□□ -1.21
SMTN-221ENST00000504335 NSD1Q96L73 2696 aaPredicted RBP7.46□□□□□ -1.21
SMTN-221ENST00000504335 PKD1L1Q8TDX9 2849 aa7.45□□□□□ -1.22
SMTN-221ENST00000504335 COX6B2Q6YFQ2 88 aa7.44□□□□□ -1.22
SMTN-221ENST00000504335 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
SMTN-221ENST00000504335 ATRQ13535 2644 aa7.41□□□□□ -1.22
SMTN-221ENST00000504335 KRTAP24-1Q3LI83 254 aa7.4□□□□□ -1.23
SMTN-221ENST00000504335 FBN1P35555 2871 aaKnown RBP7.39□□□□□ -1.23
SMTN-221ENST00000504335 TRRAPQ9Y4A5 3859 aa7.38□□□□□ -1.23
SMTN-221ENST00000504335 VWFP04275 2813 aa7.37□□□□□ -1.23
SMTN-221ENST00000504335 SPACA4Q8TDM5 124 aa7.36□□□□□ -1.23
SMTN-221ENST00000504335 KRTAP1-5Q9BYS1 174 aa7.36□□□□□ -1.23
SMTN-221ENST00000504335 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
SMTN-221ENST00000504335 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
SMTN-221ENST00000504335 DNHD1Q96M86 4753 aa7.31□□□□□ -1.24
SMTN-221ENST00000504335 STAB1Q9NY15 2570 aa7.29□□□□□ -1.24
SMTN-221ENST00000504335 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
SMTN-221ENST00000504335 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
SMTN-221ENST00000504335 TENM1Q9UKZ4 2725 aa7.25□□□□□ -1.25
SMTN-221ENST00000504335 KRTAP10-11P60412 298 aa7.22□□□□□ -1.25
SMTN-221ENST00000504335 KRTAP3-1Q9BYR8 98 aa7.21□□□□□ -1.25
SMTN-221ENST00000504335 TENM3Q9P273 2699 aa7.21□□□□□ -1.26
SMTN-221ENST00000504335 A0A0D9SG42 100 aa7.19□□□□□ -1.26
SMTN-221ENST00000504335 UBE2DNLQ8IWF7 75 aa7.17□□□□□ -1.26
SMTN-221ENST00000504335 DNAH10Q8IVF4 4471 aa7.17□□□□□ -1.26
SMTN-221ENST00000504335 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
SMTN-221ENST00000504335 FBN3Q75N90 2809 aa7.15□□□□□ -1.27
SMTN-221ENST00000504335 S4R3F8 94 aa7.14□□□□□ -1.27
SMTN-221ENST00000504335 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
SMTN-221ENST00000504335 TGP01266 2768 aa7.13□□□□□ -1.27
SMTN-221ENST00000504335 XP32Q5T750 250 aa7.13□□□□□ -1.27
SMTN-221ENST00000504335 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
SMTN-221ENST00000504335 LYSTQ99698 3801 aa7.12□□□□□ -1.27
SMTN-221ENST00000504335 DNAH8Q96JB1 4490 aa7.11□□□□□ -1.27
SMTN-221ENST00000504335 KRTAP10-6P60371 365 aaPredicted RBP7.11□□□□□ -1.27
SMTN-221ENST00000504335 KRTAP3-2Q9BYR7 98 aa7.07□□□□□ -1.28
SMTN-221ENST00000504335 MGAM2Q2M2H8 2515 aa7.07□□□□□ -1.28
SMTN-221ENST00000504335 KRTAP13-2Q52LG2 175 aa7.06□□□□□ -1.28
SMTN-221ENST00000504335 Q6ZRN7 208 aaPredicted RBP7.06□□□□□ -1.28
SMTN-221ENST00000504335 PLAC4Q8WY50 150 aa7.06□□□□□ -1.28
SMTN-221ENST00000504335 KRTAP21-3Q3LHN1 58 aa7.05□□□□□ -1.28
SMTN-221ENST00000504335 ANK2Q01484 3957 aa7.04□□□□□ -1.28
SMTN-221ENST00000504335 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
SMTN-221ENST00000504335 NOTCH1P46531 2555 aa7.02□□□□□ -1.28
SMTN-221ENST00000504335 KRTAP12-2P59991 146 aa7□□□□□ -1.29
SMTN-221ENST00000504335 DNAH9Q9NYC9 4486 aa6.99□□□□□ -1.29
SMTN-221ENST00000504335 DNAH17Q9UFH2 4485 aa6.96□□□□□ -1.3
SMTN-221ENST00000504335 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
SMTN-221ENST00000504335 CMYA5Q8N3K9 4069 aa6.95□□□□□ -1.3
SMTN-221ENST00000504335 DMBT1Q9UGM3 2413 aaPredicted RBP6.94□□□□□ -1.3
SMTN-221ENST00000504335 KRTAP12-1P59990 96 aa6.92□□□□□ -1.3
SMTN-221ENST00000504335 DNAH3Q8TD57 4116 aa6.88□□□□□ -1.31
SMTN-221ENST00000504335 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
SMTN-221ENST00000504335 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
SMTN-221ENST00000504335 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
SMTN-221ENST00000504335 KRTAP1-4P0C5Y4 121 aa6.8□□□□□ -1.32
SMTN-221ENST00000504335 PRKDCP78527 4128 aaKnown RBP6.8□□□□□ -1.32
SMTN-221ENST00000504335 PRO2289Q9P1D8 64 aa6.75□□□□□ -1.33
SMTN-221ENST00000504335 C9orf92A6NGG3 77 aa6.74□□□□□ -1.33
SMTN-221ENST00000504335 HUWE1Q7Z6Z7 4374 aaKnown RBP6.74□□□□□ -1.33
SMTN-221ENST00000504335 M0QZ58 72 aa6.71□□□□□ -1.33
SMTN-221ENST00000504335 J3QL48 77 aa6.7□□□□□ -1.34
SMTN-221ENST00000504335 HECTD4Q9Y4D8 3996 aa6.69□□□□□ -1.34
SMTN-221ENST00000504335 DYNC2H1Q8NCM8 4307 aaKnown RBP6.66□□□□□ -1.34
SMTN-221ENST00000504335 KMT2AQ03164 3969 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 224.6 ms