RNA–Protein interactions for RNA: ENST00000504010.5

NR1I3-219, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 944 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-219ENST00000504010 Q6ZQT0 140 aa5.03□□□□□ -1.6
NR1I3-219ENST00000504010 OBSCN-AS1Q96MR7 158 aa5.03□□□□□ -1.6
NR1I3-219ENST00000504010 TPRXLQ17RH7 258 aa5.02□□□□□ -1.61
NR1I3-219ENST00000504010 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
NR1I3-219ENST00000504010 LOC110117498A0A087WWA1 95 aa5□□□□□ -1.61
NR1I3-219ENST00000504010 Q5XG85 94 aa5□□□□□ -1.61
NR1I3-219ENST00000504010 Q96NJ1 140 aa5□□□□□ -1.61
NR1I3-219ENST00000504010 ETDBQ3ZM63 59 aa4.99□□□□□ -1.61
NR1I3-219ENST00000504010 FP248Q71RG6 208 aaPredicted RBP4.99□□□□□ -1.61
NR1I3-219ENST00000504010 KRTAP3-1Q9BYR8 98 aa4.99□□□□□ -1.61
NR1I3-219ENST00000504010 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
NR1I3-219ENST00000504010 KRTAP13-3Q3SY46 172 aa4.98□□□□□ -1.61
NR1I3-219ENST00000504010 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
NR1I3-219ENST00000504010 F8W1H4 67 aa4.97□□□□□ -1.61
NR1I3-219ENST00000504010 IGKV4-1P06312 121 aa4.97□□□□□ -1.61
NR1I3-219ENST00000504010 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
NR1I3-219ENST00000504010 SIGMAR1Q99720 223 aa4.97□□□□□ -1.61
NR1I3-219ENST00000504010 SS18L2Q9UHA2 77 aa4.97□□□□□ -1.61
NR1I3-219ENST00000504010 PDE6GP18545 87 aa4.94□□□□□ -1.62
NR1I3-219ENST00000504010 DSCR10P59022 87 aa4.94□□□□□ -1.62
NR1I3-219ENST00000504010 LINC00472Q9H8W2 130 aa4.94□□□□□ -1.62
NR1I3-219ENST00000504010 LCE4AQ5TA78 99 aa4.93□□□□□ -1.62
NR1I3-219ENST00000504010 NREPQ16612 68 aa4.92□□□□□ -1.62
NR1I3-219ENST00000504010 NOTCH2NLQ7Z3S9 236 aa4.92□□□□□ -1.62
NR1I3-219ENST00000504010 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
NR1I3-219ENST00000504010 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
NR1I3-219ENST00000504010 IGHV6-1A0A0B4J1U7 121 aa4.9□□□□□ -1.63
NR1I3-219ENST00000504010 LINC00846Q9NV44 126 aa4.9□□□□□ -1.63
NR1I3-219ENST00000504010 Q6ZVQ6 151 aa4.89□□□□□ -1.63
NR1I3-219ENST00000504010 SEC61BP60468 96 aaKnown RBP4.88□□□□□ -1.63
NR1I3-219ENST00000504010 IGKV3D-7A0A0C4DH55 119 aa4.87□□□□□ -1.63
NR1I3-219ENST00000504010 Q8N9L7 120 aa4.87□□□□□ -1.63
NR1I3-219ENST00000504010 A0A1B0GVX0 72 aa4.86□□□□□ -1.63
NR1I3-219ENST00000504010 LINC00313P59037 77 aa4.86□□□□□ -1.63
NR1I3-219ENST00000504010 PCOTHQ58A44 107 aa4.86□□□□□ -1.63
NR1I3-219ENST00000504010 A0A1B0GW54 56 aa4.85□□□□□ -1.63
NR1I3-219ENST00000504010 K7EQZ3 153 aa4.85□□□□□ -1.63
NR1I3-219ENST00000504010 BPY2O14599 106 aa4.85□□□□□ -1.63
NR1I3-219ENST00000504010 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
NR1I3-219ENST00000504010 A8MWP4 228 aa4.84□□□□□ -1.63
NR1I3-219ENST00000504010 J3KT08 172 aa4.84□□□□□ -1.63
NR1I3-219ENST00000504010 UBL5Q9BZL1 73 aa4.84□□□□□ -1.63
NR1I3-219ENST00000504010 KRTAP16-1A8MUX0 517 aa4.83□□□□□ -1.64
NR1I3-219ENST00000504010 NDUFB1O75438 58 aa4.83□□□□□ -1.64
NR1I3-219ENST00000504010 RPL37P61927 97 aaKnown RBP4.83□□□□□ -1.64
NR1I3-219ENST00000504010 C8orf17Q9NRJ1 99 aa4.83□□□□□ -1.64
NR1I3-219ENST00000504010 MT1HP80294 61 aa4.81□□□□□ -1.64
NR1I3-219ENST00000504010 PRR15Q8IV56 129 aa4.81□□□□□ -1.64
NR1I3-219ENST00000504010 KRTAP4-8A0A0G2JLE6 195 aa4.8□□□□□ -1.64
NR1I3-219ENST00000504010 MMP24-AS1A0A0U1RRL7 71 aa4.8□□□□□ -1.64
NR1I3-219ENST00000504010 WFDC13Q8IUB5 93 aa4.8□□□□□ -1.64
NR1I3-219ENST00000504010 C8orf87E5RJ46 101 aa4.79□□□□□ -1.64
NR1I3-219ENST00000504010 KRTAP10-6P60371 365 aaPredicted RBP4.79□□□□□ -1.64
NR1I3-219ENST00000504010 A8MUU9 505 aa4.78□□□□□ -1.64
NR1I3-219ENST00000504010 Q75L30 129 aa4.78□□□□□ -1.64
NR1I3-219ENST00000504010 C20orf166-AS1Q96NR2 134 aa4.78□□□□□ -1.64
NR1I3-219ENST00000504010 ACYP1P07311 99 aa4.76□□□□□ -1.65
NR1I3-219ENST00000504010 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
NR1I3-219ENST00000504010 ATP11AUNQ6ZP68 121 aa4.76□□□□□ -1.65
NR1I3-219ENST00000504010 USH2AO75445 5202 aa4.75□□□□□ -1.65
NR1I3-219ENST00000504010 hDV103S1A0JD37 113 aa4.75□□□□□ -1.65
NR1I3-219ENST00000504010 NDUFS5O43920 106 aa4.75□□□□□ -1.65
NR1I3-219ENST00000504010 LCE1DQ5T752 114 aa4.75□□□□□ -1.65
NR1I3-219ENST00000504010 SSPOA2VEC9 5147 aa4.75□□□□□ -1.65
NR1I3-219ENST00000504010 FAM240AA0A1B0GVK7 77 aa4.74□□□□□ -1.65
NR1I3-219ENST00000504010 CASC2Q6XLA1 102 aa4.74□□□□□ -1.65
NR1I3-219ENST00000504010 MRPL34Q9BQ48 92 aaKnown RBP4.74□□□□□ -1.65
NR1I3-219ENST00000504010 TMEM254Q8TBM7 123 aa4.73□□□□□ -1.65
NR1I3-219ENST00000504010 FCGBPQ9Y6R7 5405 aaPredicted RBP4.73□□□□□ -1.65
NR1I3-219ENST00000504010 M0R2T5 61 aa4.72□□□□□ -1.65
NR1I3-219ENST00000504010 HIST1H4AP62805 103 aaKnown RBP4.72□□□□□ -1.65
NR1I3-219ENST00000504010 A0A087WVE0 104 aa4.71□□□□□ -1.66
NR1I3-219ENST00000504010 HCG22E2RYF7 251 aa4.71□□□□□ -1.66
NR1I3-219ENST00000504010 J3QR89 54 aa4.71□□□□□ -1.66
NR1I3-219ENST00000504010 CXCL6P80162 114 aa4.71□□□□□ -1.66
NR1I3-219ENST00000504010 Q8N9P0 234 aaPredicted RBP4.71□□□□□ -1.66
NR1I3-219ENST00000504010 ZCCHC13Q8WW36 166 aaKnown RBP4.7□□□□□ -1.66
NR1I3-219ENST00000504010 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
NR1I3-219ENST00000504010 LINC00643Q86TS7 51 aa4.69□□□□□ -1.66
NR1I3-219ENST00000504010 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
NR1I3-219ENST00000504010 Q5W150 140 aa4.68□□□□□ -1.66
NR1I3-219ENST00000504010 SYNE2Q8WXH0 6885 aaKnown RBP4.68□□□□□ -1.66
NR1I3-219ENST00000504010 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
NR1I3-219ENST00000504010 K7ERU9 68 aa4.65□□□□□ -1.67
NR1I3-219ENST00000504010 KRTAP9-3Q9BYQ3 159 aa4.65□□□□□ -1.67
NR1I3-219ENST00000504010 MT-ATP8P03928 68 aa4.64□□□□□ -1.67
NR1I3-219ENST00000504010 IGKV2D-30A0A075B6S6 120 aa4.62□□□□□ -1.67
NR1I3-219ENST00000504010 IGKV2-30P06310 120 aa4.62□□□□□ -1.67
NR1I3-219ENST00000504010 SPINK7P58062 85 aa4.62□□□□□ -1.67
NR1I3-219ENST00000504010 KRTAP4-7Q9BYR0 210 aa4.62□□□□□ -1.67
NR1I3-219ENST00000504010 HRES1P13985 223 aa4.61□□□□□ -1.67
NR1I3-219ENST00000504010 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
NR1I3-219ENST00000504010 FAM236DA0A1B0GTK5 79 aa4.57□□□□□ -1.68
NR1I3-219ENST00000504010 FAM236CP0DP71 79 aa4.57□□□□□ -1.68
NR1I3-219ENST00000504010 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
NR1I3-219ENST00000504010 LCE5AQ5TCM9 118 aa4.56□□□□□ -1.68
NR1I3-219ENST00000504010 C7orf65Q6ZTY9 151 aa4.54□□□□□ -1.68
NR1I3-219ENST00000504010 MPLKIPQ8TAP9 179 aa4.54□□□□□ -1.68
NR1I3-219ENST00000504010 TP53AIP1Q9HCN2 124 aa4.54□□□□□ -1.68
NR1I3-219ENST00000504010 H0Y9P7 68 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 305 ms