RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 IFITM1P13164 125 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 FXYD2P54710 66 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 S100A7L2Q5SY68 101 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 SMCR5Q8TEV8 140 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 DIRC1Q969H9 104 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 LINC01600Q96MT4 127 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 C20orf166-AS1Q96NR2 134 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 Q9BRP9 147 aa1.84□□□□□ -2.11
UBE3D-205ENST00000503942 ETDCA0A1B0GVM5 59 aa1.83□□□□□ -2.12
UBE3D-205ENST00000503942 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
UBE3D-205ENST00000503942 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
UBE3D-205ENST00000503942 SMIM11BQ8TCY0 68 aa1.83□□□□□ -2.12
UBE3D-205ENST00000503942 HIGD1BQ9P298 99 aa1.83□□□□□ -2.12
UBE3D-205ENST00000503942 H7C2G1 150 aa1.82□□□□□ -2.12
UBE3D-205ENST00000503942 K7ERJ3 54 aa1.82□□□□□ -2.12
UBE3D-205ENST00000503942 Q6ZRX8 168 aa1.82□□□□□ -2.12
UBE3D-205ENST00000503942 SPRR4Q96PI1 79 aa1.82□□□□□ -2.12
UBE3D-205ENST00000503942 HMCN2Q8NDA2 5059 aa1.82□□□□□ -2.12
UBE3D-205ENST00000503942 LPAP08519 4548 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 TRAV13-2A0A0B4J235 113 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 SLC25A20O43772 301 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 SMIM6P0DI80 62 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 COX7BP24311 80 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 HINT1P49773 126 aaPredicted RBP1.81□□□□□ -2.12
UBE3D-205ENST00000503942 ELOF1P60002 83 aaKnown RBP1.81□□□□□ -2.12
UBE3D-205ENST00000503942 CTAG1AP78358 180 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 S100A12P80511 92 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 HSD52Q0P140 79 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 BVES-AS1Q5T3Y7 98 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 COPS9Q8WXC6 57 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 UQCR10Q9UDW1 63 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 LRP2P98164 4655 aa1.81□□□□□ -2.12
UBE3D-205ENST00000503942 A0A0G2JQZ4 141 aa1.8□□□□□ -2.12
UBE3D-205ENST00000503942 DEFB105AQ8NG35 78 aa1.8□□□□□ -2.12
UBE3D-205ENST00000503942 RAB37Q96AX2 223 aa1.8□□□□□ -2.12
UBE3D-205ENST00000503942 NAA38Q9BRA0 125 aaKnown RBP1.8□□□□□ -2.12
UBE3D-205ENST00000503942 NHP2Q9NX24 153 aaKnown RBP1.8□□□□□ -2.12
UBE3D-205ENST00000503942 CRYGAP11844 174 aa1.79□□□□□ -2.12
UBE3D-205ENST00000503942 FAM229BQ4G0N7 80 aa1.79□□□□□ -2.12
UBE3D-205ENST00000503942 LINC00575Q6W349 94 aa1.79□□□□□ -2.12
UBE3D-205ENST00000503942 CLEC2BQ92478 149 aa1.79□□□□□ -2.12
UBE3D-205ENST00000503942 PRO1854Q9UHT4 67 aa1.79□□□□□ -2.12
UBE3D-205ENST00000503942 TRBV7-6A0A0J9YX20 115 aa1.78□□□□□ -2.12
UBE3D-205ENST00000503942 hADV29S1A0JD25 119 aa1.78□□□□□ -2.12
UBE3D-205ENST00000503942 SPRR1BP22528 89 aa1.78□□□□□ -2.12
UBE3D-205ENST00000503942 BATFQ16520 125 aa1.78□□□□□ -2.12
UBE3D-205ENST00000503942 Q6ZQY7 126 aa1.78□□□□□ -2.12
UBE3D-205ENST00000503942 RETNLBQ9BQ08 111 aa1.78□□□□□ -2.12
UBE3D-205ENST00000503942 IGLV5-48A0A075B6I7 105 aa1.77□□□□□ -2.13
UBE3D-205ENST00000503942 TEX49A0A1B0GTD5 131 aa1.77□□□□□ -2.13
UBE3D-205ENST00000503942 TSTD3H0UI37 97 aa1.77□□□□□ -2.13
UBE3D-205ENST00000503942 C9orf153Q5TBE3 101 aa1.77□□□□□ -2.13
UBE3D-205ENST00000503942 HRCT1Q6UXD1 115 aa1.77□□□□□ -2.13
UBE3D-205ENST00000503942 A0A1B0GV72 72 aa1.76□□□□□ -2.13
UBE3D-205ENST00000503942 H3BUT2 72 aa1.76□□□□□ -2.13
UBE3D-205ENST00000503942 SSBP3-AS1Q7Z2R9 100 aa1.76□□□□□ -2.13
UBE3D-205ENST00000503942 SNHG12Q9BXW3 62 aa1.76□□□□□ -2.13
UBE3D-205ENST00000503942 LAMTOR3Q9UHA4 124 aa1.76□□□□□ -2.13
UBE3D-205ENST00000503942 H0YGX0 51 aa1.75□□□□□ -2.13
UBE3D-205ENST00000503942 M0R143 59 aa1.75□□□□□ -2.13
UBE3D-205ENST00000503942 TAX1BP3O14907 124 aa1.75□□□□□ -2.13
UBE3D-205ENST00000503942 TCL1BO95988 128 aa1.75□□□□□ -2.13
UBE3D-205ENST00000503942 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.75□□□□□ -2.13
UBE3D-205ENST00000503942 UBR4Q5T4S7 5183 aa1.75□□□□□ -2.13
UBE3D-205ENST00000503942 MUC17Q685J3 4493 aa1.74□□□□□ -2.13
UBE3D-205ENST00000503942 LST1O00453 97 aa1.74□□□□□ -2.13
UBE3D-205ENST00000503942 FABP2P12104 132 aa1.74□□□□□ -2.13
UBE3D-205ENST00000503942 OCIAD2Q56VL3 154 aa1.74□□□□□ -2.13
UBE3D-205ENST00000503942 A0A1B0GX51 115 aa1.73□□□□□ -2.13
UBE3D-205ENST00000503942 H3BMG7 143 aa1.73□□□□□ -2.13
UBE3D-205ENST00000503942 SPINK1P00995 79 aa1.73□□□□□ -2.13
UBE3D-205ENST00000503942 COX6CP09669 75 aa1.73□□□□□ -2.13
UBE3D-205ENST00000503942 SPAG11AQ6PDA7 123 aa1.73□□□□□ -2.13
UBE3D-205ENST00000503942 A0A1W2PPM0 123 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 C9JAW5 83 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 F8WEM9 126 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 DNAL4O96015 105 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 TRACP01848 142 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 BAALC-AS2P0C853 105 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 LINC00313P59037 77 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 C1orf195Q5TG92 126 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 ORMDL1Q9P0S3 153 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 RNF213Q63HN8 5207 aa1.72□□□□□ -2.13
UBE3D-205ENST00000503942 TRBV7-7A0A0K0K1E9 115 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 C9orf92A6NGG3 77 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 TMEM256-PLSCR3K7ERE1 68 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 SNCGO76070 127 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 ATXN8Q156A1 80 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 C4orf26Q17RF5 130 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 Q6JHZ5 121 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 PPDPFLQ8WWR9 84 aa1.71□□□□□ -2.14
UBE3D-205ENST00000503942 A0A087WSZ3 146 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 TRBV7-4A0A0J9YYF1 115 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 CCKP06307 115 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 RPS29P62273 56 aaKnown RBP1.7□□□□□ -2.14
UBE3D-205ENST00000503942 COL5A1-AS1Q5SY13 56 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 Q5XG85 94 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 ANKRD29Q8N6D5 301 aa1.7□□□□□ -2.14
UBE3D-205ENST00000503942 Q96NJ1 140 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms