RNA–Protein interactions for RNA: ENST00000503871.1

SPDL1-203, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 369 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-203ENST00000503871 PTPN13Q12923 2485 aa0.4□□□□□ -2.35
SPDL1-203ENST00000503871 NOP10Q9NPE3 64 aaKnown RBP0.4□□□□□ -2.35
SPDL1-203ENST00000503871 USP24Q9UPU5 2620 aa0.4□□□□□ -2.35
SPDL1-203ENST00000503871 WNK1Q9H4A3 2382 aa0.4□□□□□ -2.35
SPDL1-203ENST00000503871 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
SPDL1-203ENST00000503871 HRNRQ86YZ3 2850 aaPredicted RBP0.39□□□□□ -2.35
SPDL1-203ENST00000503871 SPRR2DP22532 72 aa0.39□□□□□ -2.35
SPDL1-203ENST00000503871 ACANP16112 2415 aa0.39□□□□□ -2.35
SPDL1-203ENST00000503871 DEFB131AP59861 70 aa0.38□□□□□ -2.35
SPDL1-203ENST00000503871 NF1P21359 2839 aa0.38□□□□□ -2.35
SPDL1-203ENST00000503871 NSD1Q96L73 2696 aaPredicted RBP0.38□□□□□ -2.35
SPDL1-203ENST00000503871 MAP1BP46821 2468 aaKnown RBP0.38□□□□□ -2.35
SPDL1-203ENST00000503871 NCOR2Q9Y618 2525 aa0.37□□□□□ -2.35
SPDL1-203ENST00000503871 HIVEP3Q5T1R4 2406 aa0.37□□□□□ -2.35
SPDL1-203ENST00000503871 CUBNO60494 3623 aa0.37□□□□□ -2.35
SPDL1-203ENST00000503871 SPENQ96T58 3664 aaKnown RBP0.37□□□□□ -2.35
SPDL1-203ENST00000503871 COL7A1Q02388 2944 aa0.37□□□□□ -2.35
SPDL1-203ENST00000503871 ZZEF1O43149 2961 aa0.37□□□□□ -2.35
SPDL1-203ENST00000503871 CREBBPQ92793 2442 aa0.37□□□□□ -2.35
SPDL1-203ENST00000503871 FLNCQ14315 2725 aa0.36□□□□□ -2.35
SPDL1-203ENST00000503871 MYCBP2O75592 4640 aa0.36□□□□□ -2.35
SPDL1-203ENST00000503871 APC2O95996 2303 aa0.36□□□□□ -2.35
SPDL1-203ENST00000503871 CACNA1AO00555 2505 aa0.36□□□□□ -2.35
SPDL1-203ENST00000503871 LPAP08519 4548 aa0.35□□□□□ -2.35
SPDL1-203ENST00000503871 C9orf92A6NGG3 77 aa0.35□□□□□ -2.35
SPDL1-203ENST00000503871 H3BNG1 76 aa0.35□□□□□ -2.35
SPDL1-203ENST00000503871 M0QY20 66 aa0.35□□□□□ -2.35
SPDL1-203ENST00000503871 SNRPGP62308 76 aaKnown RBP0.35□□□□□ -2.35
SPDL1-203ENST00000503871 DUOX1Q9NRD9 1551 aa0.35□□□□□ -2.35
SPDL1-203ENST00000503871 DMXL1Q9Y485 3027 aa0.35□□□□□ -2.35
SPDL1-203ENST00000503871 DCHS2Q6V1P9 2916 aa0.34□□□□□ -2.36
SPDL1-203ENST00000503871 SACSQ9NZJ4 4579 aa0.34□□□□□ -2.36
SPDL1-203ENST00000503871 GCN1Q92616 2671 aaKnown RBP0.34□□□□□ -2.36
SPDL1-203ENST00000503871 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
SPDL1-203ENST00000503871 MROH2BQ7Z745 1585 aa0.33□□□□□ -2.36
SPDL1-203ENST00000503871 HECTD4Q9Y4D8 3996 aa0.33□□□□□ -2.36
SPDL1-203ENST00000503871 FLNBO75369 2602 aaKnown RBP0.33□□□□□ -2.36
SPDL1-203ENST00000503871 IGSF10Q6WRI0 2623 aa0.33□□□□□ -2.36
SPDL1-203ENST00000503871 SPRR2BP35325 72 aa0.33□□□□□ -2.36
SPDL1-203ENST00000503871 STAB1Q9NY15 2570 aa0.33□□□□□ -2.36
SPDL1-203ENST00000503871 TACC2O95359 2948 aa0.32□□□□□ -2.36
SPDL1-203ENST00000503871 SPTBN4Q9H254 2564 aa0.31□□□□□ -2.36
SPDL1-203ENST00000503871 A8MTW9 85 aa0.31□□□□□ -2.36
SPDL1-203ENST00000503871 HSPG2P98160 4391 aa0.31□□□□□ -2.36
SPDL1-203ENST00000503871 PKD1P98161 4303 aa0.3□□□□□ -2.36
SPDL1-203ENST00000503871 CLPSL2Q6UWE3 100 aa0.3□□□□□ -2.36
SPDL1-203ENST00000503871 COL6A5A8TX70 2615 aa0.3□□□□□ -2.36
SPDL1-203ENST00000503871 MAST4O15021 2626 aa0.3□□□□□ -2.36
SPDL1-203ENST00000503871 DNAH11Q96DT5 4516 aa0.3□□□□□ -2.36
SPDL1-203ENST00000503871 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
SPDL1-203ENST00000503871 POLR2KP53803 58 aaKnown RBP0.29□□□□□ -2.36
SPDL1-203ENST00000503871 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
SPDL1-203ENST00000503871 DNAH3Q8TD57 4116 aa0.29□□□□□ -2.36
SPDL1-203ENST00000503871 SETD2Q9BYW2 2564 aaPredicted RBP0.29□□□□□ -2.36
SPDL1-203ENST00000503871 HMCN2Q8NDA2 5059 aa0.29□□□□□ -2.36
SPDL1-203ENST00000503871 KALRNO60229 2985 aa0.28□□□□□ -2.36
SPDL1-203ENST00000503871 GCC2Q8IWJ2 1684 aa0.28□□□□□ -2.36
SPDL1-203ENST00000503871 FLGP20930 4061 aaPredicted RBP0.28□□□□□ -2.36
SPDL1-203ENST00000503871 M0QZ58 72 aa0.28□□□□□ -2.36
SPDL1-203ENST00000503871 RPL39P62891 51 aaKnown RBP0.28□□□□□ -2.36
SPDL1-203ENST00000503871 SONP18583 2426 aaKnown RBP0.28□□□□□ -2.36
SPDL1-203ENST00000503871 TNP1P09430 55 aa0.27□□□□□ -2.37
SPDL1-203ENST00000503871 CHD7Q9P2D1 2997 aa0.27□□□□□ -2.37
SPDL1-203ENST00000503871 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
SPDL1-203ENST00000503871 AKAP9Q99996 3911 aa0.27□□□□□ -2.37
SPDL1-203ENST00000503871 SYNE2Q8WXH0 6885 aaKnown RBP0.27□□□□□ -2.37
SPDL1-203ENST00000503871 NBEAL2Q6ZNJ1 2754 aa0.27□□□□□ -2.37
SPDL1-203ENST00000503871 PKHD1L1Q86WI1 4243 aa0.26□□□□□ -2.37
SPDL1-203ENST00000503871 COL6A3P12111 3177 aa0.26□□□□□ -2.37
SPDL1-203ENST00000503871 DEFB110Q30KQ9 67 aa0.26□□□□□ -2.37
SPDL1-203ENST00000503871 FSIP2Q5CZC0 6907 aa0.26□□□□□ -2.37
SPDL1-203ENST00000503871 DMBT1Q9UGM3 2413 aaPredicted RBP0.26□□□□□ -2.37
SPDL1-203ENST00000503871 SPTBN5Q9NRC6 3674 aaKnown RBP0.26□□□□□ -2.37
SPDL1-203ENST00000503871 NBPF19A0A087WUL8 3843 aa0.25□□□□□ -2.37
SPDL1-203ENST00000503871 MAP1AP78559 2803 aaPredicted RBP0.25□□□□□ -2.37
SPDL1-203ENST00000503871 ANKRD11Q6UB99 2663 aaPredicted RBP0.25□□□□□ -2.37
SPDL1-203ENST00000503871 MTORP42345 2549 aa0.25□□□□□ -2.37
SPDL1-203ENST00000503871 TENM2Q9NT68 2774 aa0.25□□□□□ -2.37
SPDL1-203ENST00000503871 LRRK2Q5S007 2527 aa0.25□□□□□ -2.37
SPDL1-203ENST00000503871 ZANQ9Y493 2812 aa0.24□□□□□ -2.37
SPDL1-203ENST00000503871 RANBP2P49792 3224 aaKnown RBP0.24□□□□□ -2.37
SPDL1-203ENST00000503871 SPRR2AP35326 72 aa0.24□□□□□ -2.37
SPDL1-203ENST00000503871 ACACAQ13085 2346 aa0.24□□□□□ -2.37
SPDL1-203ENST00000503871 COL12A1Q99715 3063 aa0.23□□□□□ -2.37
SPDL1-203ENST00000503871 NBEAQ8NFP9 2946 aa0.23□□□□□ -2.37
SPDL1-203ENST00000503871 ANK3Q12955 4377 aaKnown RBP0.23□□□□□ -2.37
SPDL1-203ENST00000503871 MT1AP04731 61 aa0.23□□□□□ -2.37
SPDL1-203ENST00000503871 RPL39LQ96EH5 51 aaKnown RBP0.23□□□□□ -2.37
SPDL1-203ENST00000503871 FRYQ5TBA9 3013 aa0.22□□□□□ -2.37
SPDL1-203ENST00000503871 ANKHD1Q8IWZ3 2542 aaKnown RBP0.22□□□□□ -2.37
SPDL1-203ENST00000503871 PKHD1P08F94 4074 aa0.22□□□□□ -2.37
SPDL1-203ENST00000503871 HTTP42858 3142 aa0.22□□□□□ -2.37
SPDL1-203ENST00000503871 LRP1BQ9NZR2 4599 aa0.22□□□□□ -2.37
SPDL1-203ENST00000503871 LAMA5O15230 3695 aa0.22□□□□□ -2.37
SPDL1-203ENST00000503871 FLNAP21333 2647 aaKnown RBP0.22□□□□□ -2.37
SPDL1-203ENST00000503871 RIF1Q5UIP0 2472 aaKnown RBP0.22□□□□□ -2.37
SPDL1-203ENST00000503871 UTP20O75691 2785 aaKnown RBP0.22□□□□□ -2.37
SPDL1-203ENST00000503871 SPG11Q96JI7 2443 aa0.22□□□□□ -2.37
SPDL1-203ENST00000503871 ZFHX4Q86UP3 3567 aa0.21□□□□□ -2.38
SPDL1-203ENST00000503871 DNAH9Q9NYC9 4486 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms