RNA–Protein interactions for RNA: ENST00000503871.1

SPDL1-203, Transcript of spindle apparatus coiled-coil protein 1, humanhuman

TSL 3

Gene SPDL1, Length 369 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1-203ENST00000503871 AEBP2Q6ZN18 517 aaPredicted RBP31.86■■■□□ 2.69
SPDL1-203ENST00000503871 CHIC1Q5VXU3 224 aa30.49■■■□□ 2.47
SPDL1-203ENST00000503871 SENP3Q9H4L4 574 aaPredicted RBP26.97■■□□□ 1.91
SPDL1-203ENST00000503871 PHF23Q9BUL5 403 aaPredicted RBP26.84■■□□□ 1.89
SPDL1-203ENST00000503871 FOXD1Q16676 465 aa25.2■■□□□ 1.62
SPDL1-203ENST00000503871 PLPPR3Q6T4P5 718 aa24.46■■□□□ 1.51
SPDL1-203ENST00000503871 PPP6R1Q9UPN7 881 aa23.87■■□□□ 1.41
SPDL1-203ENST00000503871 ADRA2BP18089 450 aa23.79■■□□□ 1.4
SPDL1-203ENST00000503871 PIAS4Q8N2W9 510 aaPredicted RBP23.57■■□□□ 1.36
SPDL1-203ENST00000503871 MSH5O43196 834 aa23.33■■□□□ 1.33
SPDL1-203ENST00000503871 POTEDQ86YR6 584 aa22.3■■□□□ 1.16
SPDL1-203ENST00000503871 MAPK8IP2Q13387 824 aaPredicted RBP21.78■■□□□ 1.08
SPDL1-203ENST00000503871 SCAF1Q9H7N4 1312 aaKnown RBP21.59■■□□□ 1.05
SPDL1-203ENST00000503871 PPP4R3CPQ6ZMV5 832 aa21.54■■□□□ 1.04
SPDL1-203ENST00000503871 DMRT2Q9Y5R5 561 aa21.48■■□□□ 1.03
SPDL1-203ENST00000503871 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
SPDL1-203ENST00000503871 HOXD11P31277 338 aaPredicted RBP20.83■□□□□ 0.93
SPDL1-203ENST00000503871 RNF216Q9NWF9 866 aaPredicted RBP20.74■□□□□ 0.91
SPDL1-203ENST00000503871 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
SPDL1-203ENST00000503871 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
SPDL1-203ENST00000503871 NPM3O75607 178 aaKnown RBP20.54■□□□□ 0.88
SPDL1-203ENST00000503871 KCNA4P22459 653 aa20.47■□□□□ 0.87
SPDL1-203ENST00000503871 RNF39Q9H2S5 420 aa20.01■□□□□ 0.79
SPDL1-203ENST00000503871 DNAJC5BQ9UF47 199 aa19.96■□□□□ 0.79
SPDL1-203ENST00000503871 CACNB1Q02641 598 aaPredicted RBP19.85■□□□□ 0.77
SPDL1-203ENST00000503871 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.81■□□□□ 0.76
SPDL1-203ENST00000503871 C1QBPQ07021 282 aaKnown RBP19.67■□□□□ 0.74
SPDL1-203ENST00000503871 SLC4A2P04920 1241 aa19.56■□□□□ 0.72
SPDL1-203ENST00000503871 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
SPDL1-203ENST00000503871 SLC4A1APQ9BWU0 796 aaKnown RBP19.34■□□□□ 0.69
SPDL1-203ENST00000503871 SPINK5Q9NQ38 1064 aaPredicted RBP19.14■□□□□ 0.65
SPDL1-203ENST00000503871 CAPN15O75808 1086 aa19.02■□□□□ 0.64
SPDL1-203ENST00000503871 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
SPDL1-203ENST00000503871 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
SPDL1-203ENST00000503871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.9■□□□□ 0.62
SPDL1-203ENST00000503871 HNRNPUL2Q1KMD3 747 aaKnown RBP18.9■□□□□ 0.62
SPDL1-203ENST00000503871 ZBTB22O15209 634 aa18.89■□□□□ 0.61
SPDL1-203ENST00000503871 DSG3P32926 999 aa18.86■□□□□ 0.61
SPDL1-203ENST00000503871 SAMD1Q6SPF0 538 aaPredicted RBP18.86■□□□□ 0.61
SPDL1-203ENST00000503871 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
SPDL1-203ENST00000503871 APLP2Q06481 763 aa18.8■□□□□ 0.6
SPDL1-203ENST00000503871 ZNF219Q9P2Y4 722 aaPredicted RBP18.72■□□□□ 0.59
SPDL1-203ENST00000503871 ABCB7O75027 752 aa18.67■□□□□ 0.58
SPDL1-203ENST00000503871 ATF5Q9Y2D1 282 aaPredicted RBP18.59■□□□□ 0.57
SPDL1-203ENST00000503871 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
SPDL1-203ENST00000503871 POLA2Q14181 598 aa18.39■□□□□ 0.53
SPDL1-203ENST00000503871 CSRNP3Q8WYN3 585 aa18.27■□□□□ 0.52
SPDL1-203ENST00000503871 ATXN8OSP0DMR3 200 aa18.26■□□□□ 0.51
SPDL1-203ENST00000503871 ZBTB12Q9Y330 459 aaPredicted RBP17.92■□□□□ 0.46
SPDL1-203ENST00000503871 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
SPDL1-203ENST00000503871 OSCARQ8IYS5 282 aa17.82■□□□□ 0.44
SPDL1-203ENST00000503871 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
SPDL1-203ENST00000503871 FBLN2P98095 1184 aa17.66■□□□□ 0.42
SPDL1-203ENST00000503871 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
SPDL1-203ENST00000503871 POTEHQ6S545 545 aa17.51■□□□□ 0.39
SPDL1-203ENST00000503871 REM2Q8IYK8 340 aaPredicted RBP17.47■□□□□ 0.39
SPDL1-203ENST00000503871 SPDYE2BA6NHP3 402 aa17.46■□□□□ 0.39
SPDL1-203ENST00000503871 SPDYE6P0CI01 402 aa17.46■□□□□ 0.39
SPDL1-203ENST00000503871 SPDYE2Q495Y8 402 aa17.46■□□□□ 0.39
SPDL1-203ENST00000503871 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
SPDL1-203ENST00000503871 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
SPDL1-203ENST00000503871 SSUH2Q9Y2M2 353 aa17.32■□□□□ 0.36
SPDL1-203ENST00000503871 PITPNM1O00562 1244 aa17.3■□□□□ 0.36
SPDL1-203ENST00000503871 PIP4P2Q8N4L2 257 aa17.12■□□□□ 0.33
SPDL1-203ENST00000503871 PABPN1Q86U42 306 aaKnown RBP eCLIP17.1■□□□□ 0.33
SPDL1-203ENST00000503871 FXR2P51116 673 aaKnown RBP eCLIP17.07■□□□□ 0.32
SPDL1-203ENST00000503871 SPDYE1Q8NFV5 336 aaPredicted RBP17.06■□□□□ 0.32
SPDL1-203ENST00000503871 CLEC11AQ9Y240 323 aa17.06■□□□□ 0.32
SPDL1-203ENST00000503871 SPDYE4A6NLX3 237 aa16.98■□□□□ 0.31
SPDL1-203ENST00000503871 PRKAR2AP13861 404 aaKnown RBP16.83■□□□□ 0.28
SPDL1-203ENST00000503871 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
SPDL1-203ENST00000503871 CHADLQ6NUI6 762 aa16.77■□□□□ 0.28
SPDL1-203ENST00000503871 HAX1O00165 279 aa16.67■□□□□ 0.26
SPDL1-203ENST00000503871 PROM2Q8N271 834 aa16.67■□□□□ 0.26
SPDL1-203ENST00000503871 FKBP8Q14318 412 aa16.63■□□□□ 0.25
SPDL1-203ENST00000503871 EVX2Q03828 476 aa16.62■□□□□ 0.25
SPDL1-203ENST00000503871 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
SPDL1-203ENST00000503871 SP7Q8TDD2 431 aaPredicted RBP16.57■□□□□ 0.24
SPDL1-203ENST00000503871 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
SPDL1-203ENST00000503871 C19orf67A6NJJ6 358 aa16.51■□□□□ 0.23
SPDL1-203ENST00000503871 FARP1Q9Y4F1 1045 aaPredicted RBP16.5■□□□□ 0.23
SPDL1-203ENST00000503871 MNX1P50219 401 aaPredicted RBP16.32■□□□□ 0.2
SPDL1-203ENST00000503871 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
SPDL1-203ENST00000503871 FBXO3Q9UK99 471 aa16.25■□□□□ 0.19
SPDL1-203ENST00000503871 PLEKHG5O94827 1062 aa16.2■□□□□ 0.18
SPDL1-203ENST00000503871 GABBR2O75899 941 aa16.19■□□□□ 0.18
SPDL1-203ENST00000503871 MIER1Q8N108 512 aa16.14■□□□□ 0.17
SPDL1-203ENST00000503871 NPM1P06748 294 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPDL1-203ENST00000503871 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
SPDL1-203ENST00000503871 PLCD3Q8N3E9 789 aa16.08■□□□□ 0.16
SPDL1-203ENST00000503871 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
SPDL1-203ENST00000503871 PHF12Q96QT6 1004 aa15.99■□□□□ 0.15
SPDL1-203ENST00000503871 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
SPDL1-203ENST00000503871 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
SPDL1-203ENST00000503871 TSPYL2Q9H2G4 693 aaPredicted RBP15.93■□□□□ 0.14
SPDL1-203ENST00000503871 VASPP50552 380 aaPredicted RBP15.92■□□□□ 0.14
SPDL1-203ENST00000503871 RASEFQ8IZ41 740 aa15.92■□□□□ 0.14
SPDL1-203ENST00000503871 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
SPDL1-203ENST00000503871 GALR2O43603 387 aaPredicted RBP15.9■□□□□ 0.14
SPDL1-203ENST00000503871 CLCN6P51797 869 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms