RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 DSCR8Q96T75 97 aa9.84□□□□□ -0.83
UBE2D3-215ENST00000503418 NAA38Q9BRA0 125 aaKnown RBP9.84□□□□□ -0.83
UBE2D3-215ENST00000503418 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
UBE2D3-215ENST00000503418 LYRM7Q5U5X0 104 aa9.79□□□□□ -0.84
UBE2D3-215ENST00000503418 C9orf118A6NHY6 69 aa9.78□□□□□ -0.84
UBE2D3-215ENST00000503418 C8orf87E5RJ46 101 aa9.78□□□□□ -0.84
UBE2D3-215ENST00000503418 TAX1BP3O14907 124 aa9.78□□□□□ -0.84
UBE2D3-215ENST00000503418 BAALC-AS2P0C853 105 aa9.78□□□□□ -0.84
UBE2D3-215ENST00000503418 RBM12B-AS1Q9P1G2 102 aa9.78□□□□□ -0.84
UBE2D3-215ENST00000503418 C9JAW5 83 aa9.77□□□□□ -0.85
UBE2D3-215ENST00000503418 KRTAP9-8Q9BYQ0 159 aa9.77□□□□□ -0.85
UBE2D3-215ENST00000503418 HRES1P13985 223 aa9.76□□□□□ -0.85
UBE2D3-215ENST00000503418 COL5A1-AS1Q5SY13 56 aa9.76□□□□□ -0.85
UBE2D3-215ENST00000503418 ATXN8Q156A1 80 aa9.75□□□□□ -0.85
UBE2D3-215ENST00000503418 MPLKIPQ8TAP9 179 aa9.73□□□□□ -0.85
UBE2D3-215ENST00000503418 J3KT08 172 aa9.72□□□□□ -0.85
UBE2D3-215ENST00000503418 C21orf62-AS1Q17RA5 79 aa9.72□□□□□ -0.85
UBE2D3-215ENST00000503418 A0A1W2PPM0 123 aa9.71□□□□□ -0.86
UBE2D3-215ENST00000503418 Q6ZQT0 140 aa9.7□□□□□ -0.86
UBE2D3-215ENST00000503418 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
UBE2D3-215ENST00000503418 NDUFB1O75438 58 aa9.66□□□□□ -0.86
UBE2D3-215ENST00000503418 JMJD7-PLA2G4BH0Y9G9 81 aa9.65□□□□□ -0.86
UBE2D3-215ENST00000503418 MT2AP02795 61 aa9.64□□□□□ -0.87
UBE2D3-215ENST00000503418 USH2AO75445 5202 aa9.63□□□□□ -0.87
UBE2D3-215ENST00000503418 MTURNQ8N3F0 131 aa9.62□□□□□ -0.87
UBE2D3-215ENST00000503418 SPCS1Q9Y6A9 102 aa9.62□□□□□ -0.87
UBE2D3-215ENST00000503418 LOC110117498A0A087WWA1 95 aa9.61□□□□□ -0.87
UBE2D3-215ENST00000503418 SPINK7P58062 85 aa9.61□□□□□ -0.87
UBE2D3-215ENST00000503418 A8MWP4 228 aa9.6□□□□□ -0.87
UBE2D3-215ENST00000503418 C8orf17Q9NRJ1 99 aa9.6□□□□□ -0.87
UBE2D3-215ENST00000503418 Q8N9P0 234 aaPredicted RBP9.59□□□□□ -0.87
UBE2D3-215ENST00000503418 C14orf132Q9NPU4 83 aa9.59□□□□□ -0.87
UBE2D3-215ENST00000503418 A0A1B0GW54 56 aa9.58□□□□□ -0.88
UBE2D3-215ENST00000503418 PDE6GP18545 87 aa9.58□□□□□ -0.88
UBE2D3-215ENST00000503418 MT1FP04733 61 aa9.57□□□□□ -0.88
UBE2D3-215ENST00000503418 IGKV3D-7A0A0C4DH55 119 aa9.56□□□□□ -0.88
UBE2D3-215ENST00000503418 KRTAP10-10P60014 251 aa9.55□□□□□ -0.88
UBE2D3-215ENST00000503418 K7EP34 96 aa9.54□□□□□ -0.88
UBE2D3-215ENST00000503418 H3BT86 120 aa9.53□□□□□ -0.88
UBE2D3-215ENST00000503418 Q6ZVQ6 151 aa9.53□□□□□ -0.88
UBE2D3-215ENST00000503418 SSPOA2VEC9 5147 aa9.52□□□□□ -0.89
UBE2D3-215ENST00000503418 NREPQ16612 68 aa9.52□□□□□ -0.89
UBE2D3-215ENST00000503418 GTF2H5Q6ZYL4 71 aa9.51□□□□□ -0.89
UBE2D3-215ENST00000503418 WFDC13Q8IUB5 93 aa9.5□□□□□ -0.89
UBE2D3-215ENST00000503418 PRR15Q8IV56 129 aa9.49□□□□□ -0.89
UBE2D3-215ENST00000503418 KRTAP9-3Q9BYQ3 159 aa9.47□□□□□ -0.89
UBE2D3-215ENST00000503418 LCE2BO14633 110 aa9.46□□□□□ -0.9
UBE2D3-215ENST00000503418 MMP24-AS1A0A0U1RRL7 71 aa9.44□□□□□ -0.9
UBE2D3-215ENST00000503418 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-215ENST00000503418 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
UBE2D3-215ENST00000503418 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-215ENST00000503418 TMEM254Q8TBM7 123 aa9.42□□□□□ -0.9
UBE2D3-215ENST00000503418 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
UBE2D3-215ENST00000503418 K7EQZ3 153 aa9.4□□□□□ -0.9
UBE2D3-215ENST00000503418 hDV103S1A0JD37 113 aa9.39□□□□□ -0.91
UBE2D3-215ENST00000503418 NDUFS5O43920 106 aa9.39□□□□□ -0.91
UBE2D3-215ENST00000503418 F8W1H4 67 aa9.37□□□□□ -0.91
UBE2D3-215ENST00000503418 KRTAP19-1Q8IUB9 90 aa9.37□□□□□ -0.91
UBE2D3-215ENST00000503418 FCGBPQ9Y6R7 5405 aaPredicted RBP9.37□□□□□ -0.91
UBE2D3-215ENST00000503418 KRTAP9-7A8MTY7 169 aa9.36□□□□□ -0.91
UBE2D3-215ENST00000503418 A0A1B0GV90 55 aa9.33□□□□□ -0.92
UBE2D3-215ENST00000503418 BPY2O14599 106 aa9.33□□□□□ -0.92
UBE2D3-215ENST00000503418 IGKV2D-30A0A075B6S6 120 aa9.28□□□□□ -0.92
UBE2D3-215ENST00000503418 IGKV2-30P06310 120 aa9.28□□□□□ -0.92
UBE2D3-215ENST00000503418 ETDBQ3ZM63 59 aa9.28□□□□□ -0.92
UBE2D3-215ENST00000503418 H1FX-AS1Q4G0G2 97 aa9.27□□□□□ -0.93
UBE2D3-215ENST00000503418 Q8N9L7 120 aa9.25□□□□□ -0.93
UBE2D3-215ENST00000503418 Q5W150 140 aa9.24□□□□□ -0.93
UBE2D3-215ENST00000503418 C7orf65Q6ZTY9 151 aa9.24□□□□□ -0.93
UBE2D3-215ENST00000503418 CASC2Q6XLA1 102 aa9.22□□□□□ -0.93
UBE2D3-215ENST00000503418 HCG22E2RYF7 251 aa9.2□□□□□ -0.94
UBE2D3-215ENST00000503418 LINC00846Q9NV44 126 aa9.18□□□□□ -0.94
UBE2D3-215ENST00000503418 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
UBE2D3-215ENST00000503418 C4orf26Q17RF5 130 aa9.12□□□□□ -0.95
UBE2D3-215ENST00000503418 CXCL6P80162 114 aa9.11□□□□□ -0.95
UBE2D3-215ENST00000503418 UBL5Q9BZL1 73 aa9.11□□□□□ -0.95
UBE2D3-215ENST00000503418 ACYP1P07311 99 aa9.05□□□□□ -0.96
UBE2D3-215ENST00000503418 MACF1Q9UPN3 7388 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-215ENST00000503418 FAM240AA0A1B0GVK7 77 aa9.02□□□□□ -0.97
UBE2D3-215ENST00000503418 C5orf47Q569G3 176 aa9□□□□□ -0.97
UBE2D3-215ENST00000503418 J3QR89 54 aa8.96□□□□□ -0.98
UBE2D3-215ENST00000503418 SYNE2Q8WXH0 6885 aaKnown RBP8.96□□□□□ -0.98
UBE2D3-215ENST00000503418 S4R3F8 94 aa8.95□□□□□ -0.98
UBE2D3-215ENST00000503418 FAM236AA0A1B0GUQ0 79 aa8.94□□□□□ -0.98
UBE2D3-215ENST00000503418 FAM236BA0A1B0GV22 79 aa8.94□□□□□ -0.98
UBE2D3-215ENST00000503418 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
UBE2D3-215ENST00000503418 C1orf64Q8NEQ6 169 aa8.93□□□□□ -0.98
UBE2D3-215ENST00000503418 TP53AIP1Q9HCN2 124 aa8.9□□□□□ -0.98
UBE2D3-215ENST00000503418 ATP5EP2Q5VTU8 51 aa8.87□□□□□ -0.99
UBE2D3-215ENST00000503418 CSAG1Q6PB30 78 aa8.87□□□□□ -0.99
UBE2D3-215ENST00000503418 LCA10Q71F78 164 aa8.87□□□□□ -0.99
UBE2D3-215ENST00000503418 LINC00643Q86TS7 51 aa8.85□□□□□ -0.99
UBE2D3-215ENST00000503418 K7ERU9 68 aa8.8□□□□□ -1
UBE2D3-215ENST00000503418 HIST1H4AP62805 103 aaKnown RBP8.78□□□□□ -1
UBE2D3-215ENST00000503418 KRTAP6-3Q3LI67 103 aa8.76□□□□□ -1.01
UBE2D3-215ENST00000503418 Q5VV11 94 aa8.76□□□□□ -1.01
UBE2D3-215ENST00000503418 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
UBE2D3-215ENST00000503418 MT1BP07438 61 aa8.74□□□□□ -1.01
UBE2D3-215ENST00000503418 A6NN06 94 aa8.73□□□□□ -1.01
UBE2D3-215ENST00000503418 SPRR2GQ9BYE4 73 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms