RNA–Protein interactions for RNA: ENST00000503114.1

TRIM41-203, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 1,904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-203ENST00000503114 ALMS1Q8TCU4 4167 aa11.21□□□□□ -0.61
TRIM41-203ENST00000503114 TGP01266 2768 aa11.21□□□□□ -0.62
TRIM41-203ENST00000503114 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.62
TRIM41-203ENST00000503114 A0A087X002 238 aa11.21□□□□□ -0.62
TRIM41-203ENST00000503114 NOTCH2NLQ7Z3S9 236 aa11.21□□□□□ -0.62
TRIM41-203ENST00000503114 DNAH5Q8TE73 4624 aa11.2□□□□□ -0.62
TRIM41-203ENST00000503114 DNAH11Q96DT5 4516 aa11.2□□□□□ -0.62
TRIM41-203ENST00000503114 SSBP3-AS1Q7Z2R9 100 aa11.19□□□□□ -0.62
TRIM41-203ENST00000503114 NDUFS5O43920 106 aa11.17□□□□□ -0.62
TRIM41-203ENST00000503114 BRK1Q8WUW1 75 aa11.16□□□□□ -0.62
TRIM41-203ENST00000503114 Q6ZSA8 131 aa11.14□□□□□ -0.63
TRIM41-203ENST00000503114 V9GYY9 64 aa11.14□□□□□ -0.63
TRIM41-203ENST00000503114 PCOTHQ58A44 107 aa11.13□□□□□ -0.63
TRIM41-203ENST00000503114 SPINK6Q6UWN8 80 aa11.13□□□□□ -0.63
TRIM41-203ENST00000503114 COA5Q86WW8 74 aa11.09□□□□□ -0.63
TRIM41-203ENST00000503114 PSPHP1O15172 72 aa11.08□□□□□ -0.64
TRIM41-203ENST00000503114 C8orf87E5RJ46 101 aa11.07□□□□□ -0.64
TRIM41-203ENST00000503114 KRTAP10-1P60331 282 aa11.07□□□□□ -0.64
TRIM41-203ENST00000503114 KRTAP13-3Q3SY46 172 aa11.07□□□□□ -0.64
TRIM41-203ENST00000503114 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
TRIM41-203ENST00000503114 Q8N9P0 234 aaPredicted RBP11.07□□□□□ -0.64
TRIM41-203ENST00000503114 KRTAP13-2Q52LG2 175 aa11.05□□□□□ -0.64
TRIM41-203ENST00000503114 LOC101927531A0A1B0GV80 90 aa11.04□□□□□ -0.64
TRIM41-203ENST00000503114 PKD1P98161 4303 aa11.04□□□□□ -0.64
TRIM41-203ENST00000503114 A8MUN3 132 aa11.03□□□□□ -0.64
TRIM41-203ENST00000503114 Q5W150 140 aa11.03□□□□□ -0.64
TRIM41-203ENST00000503114 LIMD2Q9BT23 127 aa11.02□□□□□ -0.65
TRIM41-203ENST00000503114 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
TRIM41-203ENST00000503114 Q5VV11 94 aa11□□□□□ -0.65
TRIM41-203ENST00000503114 KRTAP1-4P0C5Y4 121 aa10.97□□□□□ -0.65
TRIM41-203ENST00000503114 LRP1BQ9NZR2 4599 aa10.97□□□□□ -0.65
TRIM41-203ENST00000503114 LINC00313P59037 77 aa10.96□□□□□ -0.66
TRIM41-203ENST00000503114 HYDINQ4G0P3 5121 aa10.95□□□□□ -0.66
TRIM41-203ENST00000503114 HRES1P13985 223 aa10.94□□□□□ -0.66
TRIM41-203ENST00000503114 PRR15LQ9BU68 103 aa10.91□□□□□ -0.66
TRIM41-203ENST00000503114 FAM229AH3BQW9 127 aa10.88□□□□□ -0.67
TRIM41-203ENST00000503114 KRTAP16-1A8MUX0 517 aa10.87□□□□□ -0.67
TRIM41-203ENST00000503114 Q75L30 129 aa10.86□□□□□ -0.67
TRIM41-203ENST00000503114 LINC01558Q9Y6Z2 57 aa10.86□□□□□ -0.67
TRIM41-203ENST00000503114 VPS13BQ7Z7G8 4022 aa10.86□□□□□ -0.67
TRIM41-203ENST00000503114 CHKB-CPT1BH3BT56 60 aa10.84□□□□□ -0.67
TRIM41-203ENST00000503114 SPAG11AQ6PDA7 123 aa10.81□□□□□ -0.68
TRIM41-203ENST00000503114 IGKV2-30P06310 120 aa10.8□□□□□ -0.68
TRIM41-203ENST00000503114 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
TRIM41-203ENST00000503114 ACYP2P14621 99 aa10.78□□□□□ -0.68
TRIM41-203ENST00000503114 TYMSOSQ8TAI1 123 aa10.78□□□□□ -0.68
TRIM41-203ENST00000503114 DMAC1Q96GE9 116 aa10.78□□□□□ -0.68
TRIM41-203ENST00000503114 SPINK1P00995 79 aa10.76□□□□□ -0.69
TRIM41-203ENST00000503114 C4orf48Q5BLP8 95 aa10.76□□□□□ -0.69
TRIM41-203ENST00000503114 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
TRIM41-203ENST00000503114 A8MU10 97 aa10.75□□□□□ -0.69
TRIM41-203ENST00000503114 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
TRIM41-203ENST00000503114 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
TRIM41-203ENST00000503114 SACSQ9NZJ4 4579 aa10.72□□□□□ -0.69
TRIM41-203ENST00000503114 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
TRIM41-203ENST00000503114 A6NED7 52 aa10.7□□□□□ -0.7
TRIM41-203ENST00000503114 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
TRIM41-203ENST00000503114 LCA10Q71F78 164 aa10.68□□□□□ -0.7
TRIM41-203ENST00000503114 PKHD1P08F94 4074 aa10.66□□□□□ -0.7
TRIM41-203ENST00000503114 LINC00304Q8N9R0 145 aa10.64□□□□□ -0.71
TRIM41-203ENST00000503114 CDC42SE1Q9NRR8 79 aa10.64□□□□□ -0.71
TRIM41-203ENST00000503114 IGKV2D-30A0A075B6S6 120 aa10.6□□□□□ -0.71
TRIM41-203ENST00000503114 ATP11AUNQ6ZP68 121 aa10.58□□□□□ -0.72
TRIM41-203ENST00000503114 A0A1B0GVY2 172 aa10.58□□□□□ -0.72
TRIM41-203ENST00000503114 SPINK7P58062 85 aa10.58□□□□□ -0.72
TRIM41-203ENST00000503114 DYNC1H1Q14204 4646 aaKnown RBP10.56□□□□□ -0.72
TRIM41-203ENST00000503114 PMAIP1Q13794 54 aa10.54□□□□□ -0.72
TRIM41-203ENST00000503114 SMR3BP02814 79 aaPredicted RBP10.53□□□□□ -0.72
TRIM41-203ENST00000503114 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.72
TRIM41-203ENST00000503114 PKHD1L1Q86WI1 4243 aa10.51□□□□□ -0.73
TRIM41-203ENST00000503114 SPTSSBQ8NFR3 76 aa10.5□□□□□ -0.73
TRIM41-203ENST00000503114 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
TRIM41-203ENST00000503114 APOBP04114 4563 aaKnown RBP10.47□□□□□ -0.73
TRIM41-203ENST00000503114 A0A1B0GU69 56 aa10.43□□□□□ -0.74
TRIM41-203ENST00000503114 A6NN06 94 aa10.43□□□□□ -0.74
TRIM41-203ENST00000503114 RYR2Q92736 4967 aa10.43□□□□□ -0.74
TRIM41-203ENST00000503114 C20orf166-AS1Q96NR2 134 aa10.42□□□□□ -0.74
TRIM41-203ENST00000503114 A8MUU9 505 aa10.41□□□□□ -0.74
TRIM41-203ENST00000503114 FAT1Q14517 4588 aa10.39□□□□□ -0.75
TRIM41-203ENST00000503114 C9orf92A6NGG3 77 aa10.35□□□□□ -0.75
TRIM41-203ENST00000503114 KTN1-AS1Q86SY8 53 aa10.35□□□□□ -0.75
TRIM41-203ENST00000503114 Q8N1X5 172 aa10.34□□□□□ -0.75
TRIM41-203ENST00000503114 KMT2CQ8NEZ4 4911 aaKnown RBP10.31□□□□□ -0.76
TRIM41-203ENST00000503114 SPATA8Q6RVD6 105 aa10.29□□□□□ -0.76
TRIM41-203ENST00000503114 UQCR11O14957 56 aa10.25□□□□□ -0.77
TRIM41-203ENST00000503114 FLG2Q5D862 2391 aaPredicted RBP10.21□□□□□ -0.78
TRIM41-203ENST00000503114 MIR22HGQ0VDD5 57 aa10.21□□□□□ -0.78
TRIM41-203ENST00000503114 RYR3Q15413 4870 aa10.21□□□□□ -0.78
TRIM41-203ENST00000503114 KRTAP3-1Q9BYR8 98 aa10.19□□□□□ -0.78
TRIM41-203ENST00000503114 SEC61GP60059 68 aa10.14□□□□□ -0.79
TRIM41-203ENST00000503114 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
TRIM41-203ENST00000503114 TNXBP22105 4242 aa10.1□□□□□ -0.79
TRIM41-203ENST00000503114 FAT3Q8TDW7 4589 aa10.08□□□□□ -0.8
TRIM41-203ENST00000503114 Q5VSD8 79 aa10.05□□□□□ -0.8
TRIM41-203ENST00000503114 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
TRIM41-203ENST00000503114 RBM12B-AS1Q9P1G2 102 aa10.03□□□□□ -0.8
TRIM41-203ENST00000503114 HSPG2P98160 4391 aa10.01□□□□□ -0.81
TRIM41-203ENST00000503114 LRP1Q07954 4544 aaKnown RBP10.01□□□□□ -0.81
TRIM41-203ENST00000503114 RYR1P21817 5038 aa9.94□□□□□ -0.82
TRIM41-203ENST00000503114 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms