RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 Q9BRP9 147 aa2.94□□□□□ -1.94
NEDD4-203ENST00000502612 K7ERS5 55 aa2.93□□□□□ -1.94
NEDD4-203ENST00000502612 CRYGAP11844 174 aa2.93□□□□□ -1.94
NEDD4-203ENST00000502612 SPRR4Q96PI1 79 aa2.93□□□□□ -1.94
NEDD4-203ENST00000502612 NBEAL2Q6ZNJ1 2754 aa2.93□□□□□ -1.94
NEDD4-203ENST00000502612 TRAV7A0A075B6U4 112 aa2.92□□□□□ -1.94
NEDD4-203ENST00000502612 A0A087WTM6 91 aa2.92□□□□□ -1.94
NEDD4-203ENST00000502612 SPRR1BP22528 89 aa2.92□□□□□ -1.94
NEDD4-203ENST00000502612 RPL37AP61513 92 aaKnown RBP2.92□□□□□ -1.94
NEDD4-203ENST00000502612 C1orf134Q5TEV5 83 aa2.92□□□□□ -1.94
NEDD4-203ENST00000502612 Q6ZRN7 208 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-203ENST00000502612 HIGD2AQ9BW72 106 aa2.92□□□□□ -1.94
NEDD4-203ENST00000502612 FBN1P35555 2871 aaKnown RBP2.92□□□□□ -1.94
NEDD4-203ENST00000502612 COL6A5A8TX70 2615 aa2.91□□□□□ -1.94
NEDD4-203ENST00000502612 A0A087WVE0 104 aa2.91□□□□□ -1.94
NEDD4-203ENST00000502612 CCDC179H3BU77 68 aa2.91□□□□□ -1.94
NEDD4-203ENST00000502612 SPACA4Q8TDM5 124 aa2.91□□□□□ -1.94
NEDD4-203ENST00000502612 C3orf84H3BNL1 204 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 M0R2N4 97 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 NDUFC1O43677 76 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 ERC2-IT1O76042 136 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 TMEM258P61165 79 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 PRLHP81277 87 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 PHF5AQ7RTV0 110 aaKnown RBP2.9□□□□□ -1.95
NEDD4-203ENST00000502612 DNAH3Q8TD57 4116 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 TRRAPQ9Y4A5 3859 aa2.9□□□□□ -1.95
NEDD4-203ENST00000502612 A6NED7 52 aa2.89□□□□□ -1.95
NEDD4-203ENST00000502612 J3KT08 172 aa2.89□□□□□ -1.95
NEDD4-203ENST00000502612 LY6G6CO95867 125 aa2.89□□□□□ -1.95
NEDD4-203ENST00000502612 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
NEDD4-203ENST00000502612 A0A1W2PNM2 257 aa2.88□□□□□ -1.95
NEDD4-203ENST00000502612 CD164Q04900 197 aa2.88□□□□□ -1.95
NEDD4-203ENST00000502612 KRTAP13-1Q8IUC0 172 aa2.88□□□□□ -1.95
NEDD4-203ENST00000502612 SS18L2Q9UHA2 77 aa2.88□□□□□ -1.95
NEDD4-203ENST00000502612 STAB1Q9NY15 2570 aa2.88□□□□□ -1.95
NEDD4-203ENST00000502612 ANK2Q01484 3957 aa2.87□□□□□ -1.95
NEDD4-203ENST00000502612 NDUFB1O75438 58 aa2.87□□□□□ -1.95
NEDD4-203ENST00000502612 ATP5EP56381 51 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-203ENST00000502612 HUWE1Q7Z6Z7 4374 aaKnown RBP2.86□□□□□ -1.95
NEDD4-203ENST00000502612 A0A087WSZ3 146 aa2.86□□□□□ -1.95
NEDD4-203ENST00000502612 RPS28P62857 69 aaKnown RBP2.86□□□□□ -1.95
NEDD4-203ENST00000502612 KLKP1Q107X0 134 aa2.86□□□□□ -1.95
NEDD4-203ENST00000502612 SCXQ7RTU7 201 aa2.86□□□□□ -1.95
NEDD4-203ENST00000502612 C20orf197Q8N268 126 aa2.86□□□□□ -1.95
NEDD4-203ENST00000502612 CMYA5Q8N3K9 4069 aa2.85□□□□□ -1.95
NEDD4-203ENST00000502612 HCG22E2RYF7 251 aa2.85□□□□□ -1.95
NEDD4-203ENST00000502612 PSORS1C2Q9UIG4 136 aa2.84□□□□□ -1.95
NEDD4-203ENST00000502612 TENM3Q9P273 2699 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 MP68P56378 58 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 KRTAP6-3Q3LI67 103 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 SSBP3-AS1Q7Z2R9 100 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 DNAH1Q9P2D7 4330 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 PKD1L1Q8TDX9 2849 aa2.83□□□□□ -1.96
NEDD4-203ENST00000502612 FAM236DA0A1B0GTK5 79 aa2.82□□□□□ -1.96
NEDD4-203ENST00000502612 H3BPC8 53 aa2.82□□□□□ -1.96
NEDD4-203ENST00000502612 K7EQZ3 153 aa2.82□□□□□ -1.96
NEDD4-203ENST00000502612 FAM236CP0DP71 79 aa2.82□□□□□ -1.96
NEDD4-203ENST00000502612 PRR15Q8IV56 129 aa2.82□□□□□ -1.96
NEDD4-203ENST00000502612 CASC2Q6XLA1 102 aa2.81□□□□□ -1.96
NEDD4-203ENST00000502612 LINC00472Q9H8W2 130 aa2.81□□□□□ -1.96
NEDD4-203ENST00000502612 TP53AIP1Q9HCN2 124 aa2.81□□□□□ -1.96
NEDD4-203ENST00000502612 MGAM2Q2M2H8 2515 aa2.81□□□□□ -1.96
NEDD4-203ENST00000502612 NOTCH1P46531 2555 aa2.81□□□□□ -1.96
NEDD4-203ENST00000502612 DYNC2H1Q8NCM8 4307 aaKnown RBP2.8□□□□□ -1.96
NEDD4-203ENST00000502612 NBEAL1Q6ZS30 2694 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 DNHD1Q96M86 4753 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 DNAH9Q9NYC9 4486 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 A0A1B0GU33 70 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 H7BZZ5 65 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 FAM229BQ4G0N7 80 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 SERP1Q9Y6X1 66 aa2.8□□□□□ -1.96
NEDD4-203ENST00000502612 LCE6AA0A183 80 aa2.79□□□□□ -1.96
NEDD4-203ENST00000502612 Q6ZSA8 131 aa2.79□□□□□ -1.96
NEDD4-203ENST00000502612 SNURFQ9Y675 71 aa2.79□□□□□ -1.96
NEDD4-203ENST00000502612 hDV103S1A0JD37 113 aa2.78□□□□□ -1.96
NEDD4-203ENST00000502612 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
NEDD4-203ENST00000502612 LIMD2Q9BT23 127 aa2.78□□□□□ -1.96
NEDD4-203ENST00000502612 A0A0G2JQZ4 141 aa2.77□□□□□ -1.97
NEDD4-203ENST00000502612 WFDC13Q8IUB5 93 aa2.77□□□□□ -1.97
NEDD4-203ENST00000502612 ZCCHC13Q8WW36 166 aaKnown RBP2.77□□□□□ -1.97
NEDD4-203ENST00000502612 FBN3Q75N90 2809 aa2.76□□□□□ -1.97
NEDD4-203ENST00000502612 TRAV22A0A0B4J277 110 aa2.76□□□□□ -1.97
NEDD4-203ENST00000502612 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
NEDD4-203ENST00000502612 Q5XG85 94 aa2.76□□□□□ -1.97
NEDD4-203ENST00000502612 HRCT1Q6UXD1 115 aa2.76□□□□□ -1.97
NEDD4-203ENST00000502612 STAB2Q8WWQ8 2551 aa2.76□□□□□ -1.97
NEDD4-203ENST00000502612 MMP24-AS1A0A0U1RRL7 71 aa2.75□□□□□ -1.97
NEDD4-203ENST00000502612 H0Y9P7 68 aa2.75□□□□□ -1.97
NEDD4-203ENST00000502612 SPINK6Q6UWN8 80 aa2.75□□□□□ -1.97
NEDD4-203ENST00000502612 MRPL34Q9BQ48 92 aaKnown RBP2.75□□□□□ -1.97
NEDD4-203ENST00000502612 CYSTM1Q9H1C7 97 aa2.75□□□□□ -1.97
NEDD4-203ENST00000502612 SPAG11AQ6PDA7 123 aa2.74□□□□□ -1.97
NEDD4-203ENST00000502612 LINC00208Q96KT6 92 aa2.74□□□□□ -1.97
NEDD4-203ENST00000502612 Q96NJ1 140 aa2.74□□□□□ -1.97
NEDD4-203ENST00000502612 SPINK1P00995 79 aa2.73□□□□□ -1.97
NEDD4-203ENST00000502612 RPS29P62273 56 aaKnown RBP2.73□□□□□ -1.97
NEDD4-203ENST00000502612 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
NEDD4-203ENST00000502612 CYP4F30PQ9H0H9 118 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms