RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 Q1T7F1 81 aa9.76□□□□□ -0.85
VCAN-204ENST00000502527 A0A087X002 238 aa9.73□□□□□ -0.85
VCAN-204ENST00000502527 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
VCAN-204ENST00000502527 NOTCH2NLQ7Z3S9 236 aa9.73□□□□□ -0.85
VCAN-204ENST00000502527 PRO0628Q9UI54 55 aa9.73□□□□□ -0.85
VCAN-204ENST00000502527 IGLV7-46A0A075B6I9 117 aa9.71□□□□□ -0.85
VCAN-204ENST00000502527 Q6ZSA8 131 aa9.71□□□□□ -0.85
VCAN-204ENST00000502527 DNAH5Q8TE73 4624 aa9.7□□□□□ -0.86
VCAN-204ENST00000502527 DNAH11Q96DT5 4516 aa9.7□□□□□ -0.86
VCAN-204ENST00000502527 KRTAP10-1P60331 282 aa9.69□□□□□ -0.86
VCAN-204ENST00000502527 PCOTHQ58A44 107 aa9.68□□□□□ -0.86
VCAN-204ENST00000502527 V9GYY9 64 aa9.67□□□□□ -0.86
VCAN-204ENST00000502527 ALMS1Q8TCU4 4167 aa9.67□□□□□ -0.86
VCAN-204ENST00000502527 C8orf87E5RJ46 101 aa9.65□□□□□ -0.87
VCAN-204ENST00000502527 BRK1Q8WUW1 75 aa9.65□□□□□ -0.87
VCAN-204ENST00000502527 KRTAP13-2Q52LG2 175 aa9.62□□□□□ -0.87
VCAN-204ENST00000502527 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
VCAN-204ENST00000502527 COA5Q86WW8 74 aa9.6□□□□□ -0.87
VCAN-204ENST00000502527 PSPHP1O15172 72 aa9.6□□□□□ -0.87
VCAN-204ENST00000502527 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
VCAN-204ENST00000502527 PKD1P98161 4303 aa9.59□□□□□ -0.87
VCAN-204ENST00000502527 SEC61GP60059 68 aa9.59□□□□□ -0.87
VCAN-204ENST00000502527 Q5W150 140 aa9.57□□□□□ -0.88
VCAN-204ENST00000502527 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
VCAN-204ENST00000502527 LINC00313P59037 77 aa9.56□□□□□ -0.88
VCAN-204ENST00000502527 Q8N9P0 234 aaPredicted RBP9.56□□□□□ -0.88
VCAN-204ENST00000502527 LRP1BQ9NZR2 4599 aa9.56□□□□□ -0.88
VCAN-204ENST00000502527 FAT2Q9NYQ8 4349 aa9.56□□□□□ -0.88
VCAN-204ENST00000502527 LIMD2Q9BT23 127 aa9.55□□□□□ -0.88
VCAN-204ENST00000502527 KRTAP1-4P0C5Y4 121 aa9.54□□□□□ -0.88
VCAN-204ENST00000502527 KRTAP21-3Q3LHN1 58 aa9.54□□□□□ -0.88
VCAN-204ENST00000502527 A8MUN3 132 aa9.54□□□□□ -0.88
VCAN-204ENST00000502527 HYDINQ4G0P3 5121 aa9.52□□□□□ -0.89
VCAN-204ENST00000502527 FAM229AH3BQW9 127 aa9.49□□□□□ -0.89
VCAN-204ENST00000502527 Q5VV11 94 aa9.48□□□□□ -0.89
VCAN-204ENST00000502527 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
VCAN-204ENST00000502527 HRES1P13985 223 aa9.47□□□□□ -0.89
VCAN-204ENST00000502527 PRR15LQ9BU68 103 aa9.46□□□□□ -0.9
VCAN-204ENST00000502527 TYMSOSQ8TAI1 123 aa9.44□□□□□ -0.9
VCAN-204ENST00000502527 KRTAP16-1A8MUX0 517 aa9.42□□□□□ -0.9
VCAN-204ENST00000502527 SPINK1P00995 79 aa9.41□□□□□ -0.9
VCAN-204ENST00000502527 VPS13BQ7Z7G8 4022 aa9.41□□□□□ -0.9
VCAN-204ENST00000502527 CHKB-CPT1BH3BT56 60 aa9.41□□□□□ -0.9
VCAN-204ENST00000502527 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
VCAN-204ENST00000502527 RETNLBQ9BQ08 111 aa9.39□□□□□ -0.91
VCAN-204ENST00000502527 LINC01558Q9Y6Z2 57 aa9.39□□□□□ -0.91
VCAN-204ENST00000502527 Q75L30 129 aa9.38□□□□□ -0.91
VCAN-204ENST00000502527 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
VCAN-204ENST00000502527 ACYP2P14621 99 aa9.38□□□□□ -0.91
VCAN-204ENST00000502527 LCE2DQ5TA82 110 aaPredicted RBP9.36□□□□□ -0.91
VCAN-204ENST00000502527 DMAC1Q96GE9 116 aa9.34□□□□□ -0.91
VCAN-204ENST00000502527 RPS29P62273 56 aaKnown RBP9.32□□□□□ -0.92
VCAN-204ENST00000502527 LINC00304Q8N9R0 145 aa9.32□□□□□ -0.92
VCAN-204ENST00000502527 H3BS24 57 aa9.31□□□□□ -0.92
VCAN-204ENST00000502527 PRR26Q8N8Z3 221 aa9.31□□□□□ -0.92
VCAN-204ENST00000502527 SACSQ9NZJ4 4579 aa9.29□□□□□ -0.92
VCAN-204ENST00000502527 A6NED7 52 aa9.28□□□□□ -0.92
VCAN-204ENST00000502527 PKHD1P08F94 4074 aa9.27□□□□□ -0.93
VCAN-204ENST00000502527 SMR3BP02814 79 aaPredicted RBP9.25□□□□□ -0.93
VCAN-204ENST00000502527 IGKV2D-30A0A075B6S6 120 aa9.25□□□□□ -0.93
VCAN-204ENST00000502527 A8MU10 97 aa9.24□□□□□ -0.93
VCAN-204ENST00000502527 A0A1B0GVY2 172 aa9.24□□□□□ -0.93
VCAN-204ENST00000502527 DYNC1H1Q14204 4646 aaKnown RBP9.22□□□□□ -0.93
VCAN-204ENST00000502527 LCA10Q71F78 164 aa9.22□□□□□ -0.93
VCAN-204ENST00000502527 CDC42SE1Q9NRR8 79 aa9.19□□□□□ -0.94
VCAN-204ENST00000502527 A0A0A0MQY5 61 aa9.17□□□□□ -0.94
VCAN-204ENST00000502527 KRTAP10-4P60372 401 aaPredicted RBP9.16□□□□□ -0.94
VCAN-204ENST00000502527 ATP11AUNQ6ZP68 121 aa9.16□□□□□ -0.94
VCAN-204ENST00000502527 SPINK7P58062 85 aa9.14□□□□□ -0.95
VCAN-204ENST00000502527 C7orf65Q6ZTY9 151 aa9.14□□□□□ -0.95
VCAN-204ENST00000502527 PMAIP1Q13794 54 aa9.14□□□□□ -0.95
VCAN-204ENST00000502527 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
VCAN-204ENST00000502527 APOBP04114 4563 aaKnown RBP9.1□□□□□ -0.95
VCAN-204ENST00000502527 A0A1B0GU69 56 aa9.08□□□□□ -0.96
VCAN-204ENST00000502527 FAT1Q14517 4588 aa9.07□□□□□ -0.96
VCAN-204ENST00000502527 C20orf166-AS1Q96NR2 134 aa9.06□□□□□ -0.96
VCAN-204ENST00000502527 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
VCAN-204ENST00000502527 A8MUU9 505 aa9.06□□□□□ -0.96
VCAN-204ENST00000502527 PKHD1L1Q86WI1 4243 aa9.05□□□□□ -0.96
VCAN-204ENST00000502527 RYR2Q92736 4967 aa9.03□□□□□ -0.96
VCAN-204ENST00000502527 Q8N1X5 172 aa9□□□□□ -0.97
VCAN-204ENST00000502527 A6NN06 94 aa8.97□□□□□ -0.97
VCAN-204ENST00000502527 KTN1-AS1Q86SY8 53 aa8.92□□□□□ -0.98
VCAN-204ENST00000502527 UQCR11O14957 56 aa8.9□□□□□ -0.98
VCAN-204ENST00000502527 SPATA8Q6RVD6 105 aa8.9□□□□□ -0.98
VCAN-204ENST00000502527 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
VCAN-204ENST00000502527 MIR22HGQ0VDD5 57 aa8.87□□□□□ -0.99
VCAN-204ENST00000502527 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -0.99
VCAN-204ENST00000502527 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
VCAN-204ENST00000502527 KRTAP3-1Q9BYR8 98 aa8.82□□□□□ -1
VCAN-204ENST00000502527 Q5VSD8 79 aa8.81□□□□□ -1
VCAN-204ENST00000502527 FAT3Q8TDW7 4589 aa8.76□□□□□ -1.01
VCAN-204ENST00000502527 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
VCAN-204ENST00000502527 TNXBP22105 4242 aa8.74□□□□□ -1.01
VCAN-204ENST00000502527 HSPG2P98160 4391 aa8.71□□□□□ -1.01
VCAN-204ENST00000502527 LRP1Q07954 4544 aaKnown RBP8.71□□□□□ -1.02
VCAN-204ENST00000502527 KRTAP3-3Q9BYR6 98 aa8.71□□□□□ -1.02
VCAN-204ENST00000502527 KRTAP3-2Q9BYR7 98 aa8.71□□□□□ -1.02
VCAN-204ENST00000502527 RPL37P61927 97 aaKnown RBP8.68□□□□□ -1.02
VCAN-204ENST00000502527 RYR1P21817 5038 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 446.6 ms