RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 COX7CP15954 63 aa4.7□□□□□ -1.66
PDZRN3-212ENST00000498048 WFDC13Q8IUB5 93 aa4.7□□□□□ -1.66
PDZRN3-212ENST00000498048 SMIM20Q8N5G0 67 aa4.7□□□□□ -1.66
PDZRN3-212ENST00000498048 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
PDZRN3-212ENST00000498048 UQCRQO14949 82 aa4.69□□□□□ -1.66
PDZRN3-212ENST00000498048 ASB16-AS1Q495Z4 193 aa4.69□□□□□ -1.66
PDZRN3-212ENST00000498048 PRR15Q8IV56 129 aa4.69□□□□□ -1.66
PDZRN3-212ENST00000498048 PRR26Q8N8Z3 221 aa4.69□□□□□ -1.66
PDZRN3-212ENST00000498048 HSPG2P98160 4391 aa4.68□□□□□ -1.66
PDZRN3-212ENST00000498048 TRAV7A0A075B6U4 112 aa4.68□□□□□ -1.66
PDZRN3-212ENST00000498048 LINC00304Q8N9R0 145 aa4.68□□□□□ -1.66
PDZRN3-212ENST00000498048 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
PDZRN3-212ENST00000498048 FAT1Q14517 4588 aa4.68□□□□□ -1.66
PDZRN3-212ENST00000498048 MMP24-AS1A0A0U1RRL7 71 aa4.67□□□□□ -1.66
PDZRN3-212ENST00000498048 A0A1B0GVX0 72 aa4.67□□□□□ -1.66
PDZRN3-212ENST00000498048 IGHV6-1A0A0B4J1U7 121 aa4.66□□□□□ -1.66
PDZRN3-212ENST00000498048 Q5XG85 94 aa4.66□□□□□ -1.66
PDZRN3-212ENST00000498048 CASC2Q6XLA1 102 aa4.66□□□□□ -1.66
PDZRN3-212ENST00000498048 RYR1P21817 5038 aa4.65□□□□□ -1.66
PDZRN3-212ENST00000498048 SPINK1P00995 79 aa4.65□□□□□ -1.67
PDZRN3-212ENST00000498048 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
PDZRN3-212ENST00000498048 KRTAP3-1Q9BYR8 98 aa4.65□□□□□ -1.67
PDZRN3-212ENST00000498048 OCR1Q9BZK8 76 aa4.65□□□□□ -1.67
PDZRN3-212ENST00000498048 C8orf17Q9NRJ1 99 aa4.65□□□□□ -1.67
PDZRN3-212ENST00000498048 RPS29P62273 56 aaKnown RBP4.64□□□□□ -1.67
PDZRN3-212ENST00000498048 SPAG11AQ6PDA7 123 aa4.64□□□□□ -1.67
PDZRN3-212ENST00000498048 hDV103S1A0JD37 113 aa4.63□□□□□ -1.67
PDZRN3-212ENST00000498048 KRTAP23-1A1A580 65 aa4.63□□□□□ -1.67
PDZRN3-212ENST00000498048 KRTAP29-1A8MX34 341 aaPredicted RBP4.63□□□□□ -1.67
PDZRN3-212ENST00000498048 C1orf195Q5TG92 126 aa4.63□□□□□ -1.67
PDZRN3-212ENST00000498048 KRTAP9-9Q9BYP9 154 aa4.63□□□□□ -1.67
PDZRN3-212ENST00000498048 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
PDZRN3-212ENST00000498048 C8orf87E5RJ46 101 aa4.62□□□□□ -1.67
PDZRN3-212ENST00000498048 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
PDZRN3-212ENST00000498048 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
PDZRN3-212ENST00000498048 TMEM254Q8TBM7 123 aa4.61□□□□□ -1.67
PDZRN3-212ENST00000498048 Q8N1X5 172 aa4.6□□□□□ -1.67
PDZRN3-212ENST00000498048 EPPK1P58107 5090 aaKnown RBP4.59□□□□□ -1.67
PDZRN3-212ENST00000498048 MRPL34Q9BQ48 92 aaKnown RBP4.59□□□□□ -1.67
PDZRN3-212ENST00000498048 NDUFS5O43920 106 aa4.58□□□□□ -1.68
PDZRN3-212ENST00000498048 KLKP1Q107X0 134 aa4.58□□□□□ -1.68
PDZRN3-212ENST00000498048 NOTCH2NLQ7Z3S9 236 aa4.58□□□□□ -1.68
PDZRN3-212ENST00000498048 CYSTM1Q9H1C7 97 aa4.58□□□□□ -1.68
PDZRN3-212ENST00000498048 SNURFQ9Y675 71 aa4.58□□□□□ -1.68
PDZRN3-212ENST00000498048 FLG2Q5D862 2391 aaPredicted RBP4.58□□□□□ -1.68
PDZRN3-212ENST00000498048 KIAA1109Q2LD37 5005 aa4.57□□□□□ -1.68
PDZRN3-212ENST00000498048 TRAV22A0A0B4J277 110 aa4.56□□□□□ -1.68
PDZRN3-212ENST00000498048 H0Y9P7 68 aa4.56□□□□□ -1.68
PDZRN3-212ENST00000498048 MP68P56378 58 aa4.56□□□□□ -1.68
PDZRN3-212ENST00000498048 LINC00313P59037 77 aa4.56□□□□□ -1.68
PDZRN3-212ENST00000498048 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
PDZRN3-212ENST00000498048 A0A0U1RQV1 116 aa4.55□□□□□ -1.68
PDZRN3-212ENST00000498048 TMEM258P61165 79 aa4.55□□□□□ -1.68
PDZRN3-212ENST00000498048 KRTAP17-1Q9BYP8 105 aa4.55□□□□□ -1.68
PDZRN3-212ENST00000498048 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
PDZRN3-212ENST00000498048 TNXBP22105 4242 aa4.54□□□□□ -1.68
PDZRN3-212ENST00000498048 C5orf47Q569G3 176 aa4.54□□□□□ -1.68
PDZRN3-212ENST00000498048 NDUFC1O43677 76 aa4.53□□□□□ -1.68
PDZRN3-212ENST00000498048 RETNLBQ9BQ08 111 aa4.53□□□□□ -1.68
PDZRN3-212ENST00000498048 KRTAP16-1A8MUX0 517 aa4.52□□□□□ -1.69
PDZRN3-212ENST00000498048 H3BPC8 53 aa4.52□□□□□ -1.69
PDZRN3-212ENST00000498048 H7BZZ5 65 aa4.52□□□□□ -1.69
PDZRN3-212ENST00000498048 KRTAP10-8P60410 259 aa4.52□□□□□ -1.69
PDZRN3-212ENST00000498048 BIRC6Q9NR09 4857 aa4.52□□□□□ -1.69
PDZRN3-212ENST00000498048 LRP1Q07954 4544 aaKnown RBP4.51□□□□□ -1.69
PDZRN3-212ENST00000498048 FAM236DA0A1B0GTK5 79 aa4.51□□□□□ -1.69
PDZRN3-212ENST00000498048 FAM236CP0DP71 79 aa4.51□□□□□ -1.69
PDZRN3-212ENST00000498048 ZCCHC13Q8WW36 166 aaKnown RBP4.51□□□□□ -1.69
PDZRN3-212ENST00000498048 LINC00208Q96KT6 92 aa4.51□□□□□ -1.69
PDZRN3-212ENST00000498048 KRTAP4-8A0A0G2JLE6 195 aa4.5□□□□□ -1.69
PDZRN3-212ENST00000498048 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
PDZRN3-212ENST00000498048 Q8N9P0 234 aaPredicted RBP4.49□□□□□ -1.69
PDZRN3-212ENST00000498048 C9orf92A6NGG3 77 aa4.48□□□□□ -1.69
PDZRN3-212ENST00000498048 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
PDZRN3-212ENST00000498048 C1orf64Q8NEQ6 169 aa4.48□□□□□ -1.69
PDZRN3-212ENST00000498048 OXTP01178 125 aa4.47□□□□□ -1.69
PDZRN3-212ENST00000498048 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
PDZRN3-212ENST00000498048 FP248Q71RG6 208 aaPredicted RBP4.46□□□□□ -1.7
PDZRN3-212ENST00000498048 LOC101927531A0A1B0GV80 90 aa4.45□□□□□ -1.7
PDZRN3-212ENST00000498048 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
PDZRN3-212ENST00000498048 Q5W150 140 aa4.45□□□□□ -1.7
PDZRN3-212ENST00000498048 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
PDZRN3-212ENST00000498048 MYCBP2O75592 4640 aa4.43□□□□□ -1.7
PDZRN3-212ENST00000498048 PCOTHQ58A44 107 aa4.43□□□□□ -1.7
PDZRN3-212ENST00000498048 DMBT1Q9UGM3 2413 aaPredicted RBP4.43□□□□□ -1.7
PDZRN3-212ENST00000498048 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
PDZRN3-212ENST00000498048 IGLV7-46A0A075B6I9 117 aa4.41□□□□□ -1.7
PDZRN3-212ENST00000498048 A8MUU9 505 aa4.41□□□□□ -1.7
PDZRN3-212ENST00000498048 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
PDZRN3-212ENST00000498048 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
PDZRN3-212ENST00000498048 PRR4Q16378 134 aa4.4□□□□□ -1.71
PDZRN3-212ENST00000498048 SPANXA2-OT1Q8N9U9 137 aa4.4□□□□□ -1.71
PDZRN3-212ENST00000498048 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
PDZRN3-212ENST00000498048 SERP1Q9Y6X1 66 aa4.39□□□□□ -1.71
PDZRN3-212ENST00000498048 HERC2O95714 4834 aa4.38□□□□□ -1.71
PDZRN3-212ENST00000498048 C7orf65Q6ZTY9 151 aa4.38□□□□□ -1.71
PDZRN3-212ENST00000498048 Q75L30 129 aa4.38□□□□□ -1.71
PDZRN3-212ENST00000498048 CYP4F30PQ9H0H9 118 aa4.38□□□□□ -1.71
PDZRN3-212ENST00000498048 ABCA13Q86UQ4 5058 aa4.36□□□□□ -1.71
PDZRN3-212ENST00000498048 RPL37P61927 97 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms