RNA–Protein interactions for RNA: ENST00000498038.1

HLA-DPB1-217, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

Gene HLA-DPB1, Length 775 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-217ENST00000498038 NDUFB1O75438 58 aa10.61□□□□□ -0.71
HLA-DPB1-217ENST00000498038 Q6ZVQ6 151 aa10.6□□□□□ -0.71
HLA-DPB1-217ENST00000498038 LINC00846Q9NV44 126 aa10.6□□□□□ -0.71
HLA-DPB1-217ENST00000498038 A8MWP4 228 aa10.58□□□□□ -0.72
HLA-DPB1-217ENST00000498038 RPL37P61927 97 aaKnown RBP10.58□□□□□ -0.72
HLA-DPB1-217ENST00000498038 NOTCH2NLQ7Z3S9 236 aa10.58□□□□□ -0.72
HLA-DPB1-217ENST00000498038 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
HLA-DPB1-217ENST00000498038 RNF213Q63HN8 5207 aa10.57□□□□□ -0.72
HLA-DPB1-217ENST00000498038 C8orf87E5RJ46 101 aa10.56□□□□□ -0.72
HLA-DPB1-217ENST00000498038 BPY2O14599 106 aa10.56□□□□□ -0.72
HLA-DPB1-217ENST00000498038 MUC17Q685J3 4493 aa10.56□□□□□ -0.72
HLA-DPB1-217ENST00000498038 IGKV3D-7A0A0C4DH55 119 aa10.55□□□□□ -0.72
HLA-DPB1-217ENST00000498038 PCOTHQ58A44 107 aa10.55□□□□□ -0.72
HLA-DPB1-217ENST00000498038 Q75L30 129 aa10.53□□□□□ -0.72
HLA-DPB1-217ENST00000498038 PRR15Q8IV56 129 aa10.52□□□□□ -0.73
HLA-DPB1-217ENST00000498038 KRTAP16-1A8MUX0 517 aa10.51□□□□□ -0.73
HLA-DPB1-217ENST00000498038 C20orf166-AS1Q96NR2 134 aa10.51□□□□□ -0.73
HLA-DPB1-217ENST00000498038 A8MUU9 505 aa10.5□□□□□ -0.73
HLA-DPB1-217ENST00000498038 C8orf17Q9NRJ1 99 aa10.49□□□□□ -0.73
HLA-DPB1-217ENST00000498038 K7EQZ3 153 aa10.48□□□□□ -0.73
HLA-DPB1-217ENST00000498038 ATP11AUNQ6ZP68 121 aa10.48□□□□□ -0.73
HLA-DPB1-217ENST00000498038 ACYP1P07311 99 aa10.47□□□□□ -0.73
HLA-DPB1-217ENST00000498038 KRTAP4-1Q9BYQ7 146 aa10.44□□□□□ -0.74
HLA-DPB1-217ENST00000498038 Q8N9L7 120 aa10.43□□□□□ -0.74
HLA-DPB1-217ENST00000498038 FAM240AA0A1B0GVK7 77 aa10.42□□□□□ -0.74
HLA-DPB1-217ENST00000498038 MMP24-AS1A0A0U1RRL7 71 aa10.4□□□□□ -0.74
HLA-DPB1-217ENST00000498038 MUC2Q02817 5179 aa10.37□□□□□ -0.75
HLA-DPB1-217ENST00000498038 hDV103S1A0JD37 113 aa10.36□□□□□ -0.75
HLA-DPB1-217ENST00000498038 CXCL6P80162 114 aa10.36□□□□□ -0.75
HLA-DPB1-217ENST00000498038 Q8N9P0 234 aaPredicted RBP10.35□□□□□ -0.75
HLA-DPB1-217ENST00000498038 TMEM254Q8TBM7 123 aa10.35□□□□□ -0.75
HLA-DPB1-217ENST00000498038 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
HLA-DPB1-217ENST00000498038 J3QR89 54 aa10.32□□□□□ -0.76
HLA-DPB1-217ENST00000498038 WFDC13Q8IUB5 93 aa10.32□□□□□ -0.76
HLA-DPB1-217ENST00000498038 CASC2Q6XLA1 102 aa10.31□□□□□ -0.76
HLA-DPB1-217ENST00000498038 A0A0U1RQV1 116 aa10.29□□□□□ -0.76
HLA-DPB1-217ENST00000498038 NDUFS5O43920 106 aa10.28□□□□□ -0.76
HLA-DPB1-217ENST00000498038 ZCCHC13Q8WW36 166 aaKnown RBP10.27□□□□□ -0.77
HLA-DPB1-217ENST00000498038 HCG22E2RYF7 251 aa10.26□□□□□ -0.77
HLA-DPB1-217ENST00000498038 ATP5EP2Q5VTU8 51 aa10.26□□□□□ -0.77
HLA-DPB1-217ENST00000498038 LINC00643Q86TS7 51 aa10.24□□□□□ -0.77
HLA-DPB1-217ENST00000498038 HIST1H4AP62805 103 aaKnown RBP10.19□□□□□ -0.78
HLA-DPB1-217ENST00000498038 K7ERU9 68 aa10.14□□□□□ -0.79
HLA-DPB1-217ENST00000498038 SPINK7P58062 85 aa10.1□□□□□ -0.79
HLA-DPB1-217ENST00000498038 KRTAP19-2Q3LHN2 52 aa10.09□□□□□ -0.79
HLA-DPB1-217ENST00000498038 Q5W150 140 aa10.09□□□□□ -0.79
HLA-DPB1-217ENST00000498038 A0A087WVE0 104 aa10.07□□□□□ -0.8
HLA-DPB1-217ENST00000498038 LCE2CQ5TA81 110 aa10.06□□□□□ -0.8
HLA-DPB1-217ENST00000498038 COX6B2Q6YFQ2 88 aa10.06□□□□□ -0.8
HLA-DPB1-217ENST00000498038 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
HLA-DPB1-217ENST00000498038 FAT4Q6V0I7 4981 aa10.04□□□□□ -0.8
HLA-DPB1-217ENST00000498038 HRES1P13985 223 aa10.03□□□□□ -0.8
HLA-DPB1-217ENST00000498038 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
HLA-DPB1-217ENST00000498038 IGKV2-30P06310 120 aa9.99□□□□□ -0.81
HLA-DPB1-217ENST00000498038 RBM12B-AS1Q9P1G2 102 aa9.99□□□□□ -0.81
HLA-DPB1-217ENST00000498038 KRTAP9-2Q9BYQ4 174 aa9.98□□□□□ -0.81
HLA-DPB1-217ENST00000498038 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
HLA-DPB1-217ENST00000498038 FAM236DA0A1B0GTK5 79 aa9.95□□□□□ -0.82
HLA-DPB1-217ENST00000498038 FAM236CP0DP71 79 aa9.95□□□□□ -0.82
HLA-DPB1-217ENST00000498038 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
HLA-DPB1-217ENST00000498038 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
HLA-DPB1-217ENST00000498038 MT-ATP8P03928 68 aa9.93□□□□□ -0.82
HLA-DPB1-217ENST00000498038 MT1HP80294 61 aa9.91□□□□□ -0.82
HLA-DPB1-217ENST00000498038 UQCRQO14949 82 aa9.89□□□□□ -0.83
HLA-DPB1-217ENST00000498038 IMUPQ9GZP8 106 aa9.89□□□□□ -0.83
HLA-DPB1-217ENST00000498038 TRAV22A0A0B4J277 110 aa9.87□□□□□ -0.83
HLA-DPB1-217ENST00000498038 SCGB1A1P11684 91 aa9.84□□□□□ -0.83
HLA-DPB1-217ENST00000498038 M0R2T5 61 aa9.83□□□□□ -0.84
HLA-DPB1-217ENST00000498038 KRTAP9-6A0A140TA67 174 aa9.82□□□□□ -0.84
HLA-DPB1-217ENST00000498038 H0Y9P7 68 aa9.81□□□□□ -0.84
HLA-DPB1-217ENST00000498038 OCR1Q9BZK8 76 aa9.81□□□□□ -0.84
HLA-DPB1-217ENST00000498038 ATOX1O00244 68 aa9.78□□□□□ -0.84
HLA-DPB1-217ENST00000498038 LOC101927531A0A1B0GV80 90 aa9.77□□□□□ -0.85
HLA-DPB1-217ENST00000498038 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
HLA-DPB1-217ENST00000498038 CYP4F30PQ9H0H9 118 aa9.76□□□□□ -0.85
HLA-DPB1-217ENST00000498038 FLGP20930 4061 aaPredicted RBP9.74□□□□□ -0.85
HLA-DPB1-217ENST00000498038 FAM236AA0A1B0GUQ0 79 aa9.73□□□□□ -0.85
HLA-DPB1-217ENST00000498038 FAM236BA0A1B0GV22 79 aa9.73□□□□□ -0.85
HLA-DPB1-217ENST00000498038 MP68P56378 58 aa9.72□□□□□ -0.85
HLA-DPB1-217ENST00000498038 C5orf47Q569G3 176 aa9.71□□□□□ -0.86
HLA-DPB1-217ENST00000498038 C1orf64Q8NEQ6 169 aa9.71□□□□□ -0.86
HLA-DPB1-217ENST00000498038 LINC00208Q96KT6 92 aa9.71□□□□□ -0.86
HLA-DPB1-217ENST00000498038 H1FX-AS1Q4G0G2 97 aa9.68□□□□□ -0.86
HLA-DPB1-217ENST00000498038 KRTAP10-6P60371 365 aaPredicted RBP9.65□□□□□ -0.86
HLA-DPB1-217ENST00000498038 SMIM20Q8N5G0 67 aa9.64□□□□□ -0.87
HLA-DPB1-217ENST00000498038 TRAV7A0A075B6U4 112 aa9.61□□□□□ -0.87
HLA-DPB1-217ENST00000498038 H3BPC8 53 aa9.61□□□□□ -0.87
HLA-DPB1-217ENST00000498038 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
HLA-DPB1-217ENST00000498038 KRTAP3-1Q9BYR8 98 aa9.61□□□□□ -0.87
HLA-DPB1-217ENST00000498038 KLKP1Q107X0 134 aa9.58□□□□□ -0.88
HLA-DPB1-217ENST00000498038 S4R3F8 94 aa9.47□□□□□ -0.89
HLA-DPB1-217ENST00000498038 SERP2Q8N6R1 65 aa9.46□□□□□ -0.9
HLA-DPB1-217ENST00000498038 KRTAP9-8Q9BYQ0 159 aa9.44□□□□□ -0.9
HLA-DPB1-217ENST00000498038 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
HLA-DPB1-217ENST00000498038 LCA10Q71F78 164 aa9.4□□□□□ -0.9
HLA-DPB1-217ENST00000498038 A8MUN3 132 aa9.39□□□□□ -0.91
HLA-DPB1-217ENST00000498038 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
HLA-DPB1-217ENST00000498038 MT2AP02795 61 aa9.37□□□□□ -0.91
HLA-DPB1-217ENST00000498038 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
HLA-DPB1-217ENST00000498038 CRCT1Q9UGL9 99 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms