RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 FXYD2P54710 66 aa6□□□□□ -1.45
NUDCD3-211ENST00000497978 ORMDL1Q9P0S3 153 aa6□□□□□ -1.45
NUDCD3-211ENST00000497978 TRBV7-4A0A0J9YYF1 115 aa5.99□□□□□ -1.45
NUDCD3-211ENST00000497978 PSMB2P49721 201 aa5.99□□□□□ -1.45
NUDCD3-211ENST00000497978 TMEM256-PLSCR3K7ERE1 68 aa5.98□□□□□ -1.45
NUDCD3-211ENST00000497978 A0A1B0GV72 72 aa5.97□□□□□ -1.45
NUDCD3-211ENST00000497978 COX6CP09669 75 aa5.97□□□□□ -1.45
NUDCD3-211ENST00000497978 FAM236DA0A1B0GTK5 79 aa5.96□□□□□ -1.46
NUDCD3-211ENST00000497978 FAM236CP0DP71 79 aa5.96□□□□□ -1.46
NUDCD3-211ENST00000497978 TRACP01848 142 aa5.95□□□□□ -1.46
NUDCD3-211ENST00000497978 CCKP06307 115 aa5.95□□□□□ -1.46
NUDCD3-211ENST00000497978 HSD52Q0P140 79 aa5.95□□□□□ -1.46
NUDCD3-211ENST00000497978 KRTAP16-1A8MUX0 517 aa5.94□□□□□ -1.46
NUDCD3-211ENST00000497978 KRTAP9-8Q9BYQ0 159 aa5.94□□□□□ -1.46
NUDCD3-211ENST00000497978 RBM12B-AS1Q9P1G2 102 aa5.94□□□□□ -1.46
NUDCD3-211ENST00000497978 IGHV6-1A0A0B4J1U7 121 aa5.93□□□□□ -1.46
NUDCD3-211ENST00000497978 K7ERJ3 54 aa5.93□□□□□ -1.46
NUDCD3-211ENST00000497978 DEFB116Q30KQ4 102 aa5.93□□□□□ -1.46
NUDCD3-211ENST00000497978 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
NUDCD3-211ENST00000497978 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
NUDCD3-211ENST00000497978 NOTCH2NLQ7Z3S9 236 aa5.91□□□□□ -1.46
NUDCD3-211ENST00000497978 VPS25Q9BRG1 176 aa5.9□□□□□ -1.46
NUDCD3-211ENST00000497978 C8orf87E5RJ46 101 aa5.89□□□□□ -1.47
NUDCD3-211ENST00000497978 SCGB1C2P0DMR2 95 aa5.88□□□□□ -1.47
NUDCD3-211ENST00000497978 HRES1P13985 223 aa5.88□□□□□ -1.47
NUDCD3-211ENST00000497978 RBM3P98179 157 aaKnown RBP5.88□□□□□ -1.47
NUDCD3-211ENST00000497978 PYY3Q5JQD4 70 aa5.88□□□□□ -1.47
NUDCD3-211ENST00000497978 DSCR8Q96T75 97 aa5.88□□□□□ -1.47
NUDCD3-211ENST00000497978 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
NUDCD3-211ENST00000497978 MPLKIPQ8TAP9 179 aa5.87□□□□□ -1.47
NUDCD3-211ENST00000497978 SSPOA2VEC9 5147 aa5.87□□□□□ -1.47
NUDCD3-211ENST00000497978 USH2AO75445 5202 aa5.86□□□□□ -1.47
NUDCD3-211ENST00000497978 MTURNQ8N3F0 131 aa5.86□□□□□ -1.47
NUDCD3-211ENST00000497978 KRTAP4-11Q9BYQ6 195 aa5.86□□□□□ -1.47
NUDCD3-211ENST00000497978 UQCR10Q9UDW1 63 aa5.86□□□□□ -1.47
NUDCD3-211ENST00000497978 J3KT08 172 aa5.85□□□□□ -1.47
NUDCD3-211ENST00000497978 MT2AP02795 61 aa5.85□□□□□ -1.47
NUDCD3-211ENST00000497978 C9JAW5 83 aa5.83□□□□□ -1.48
NUDCD3-211ENST00000497978 BAALC-AS2P0C853 105 aa5.82□□□□□ -1.48
NUDCD3-211ENST00000497978 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
NUDCD3-211ENST00000497978 NDUFB1O75438 58 aa5.81□□□□□ -1.48
NUDCD3-211ENST00000497978 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
NUDCD3-211ENST00000497978 MT1FP04733 61 aa5.8□□□□□ -1.48
NUDCD3-211ENST00000497978 Q6ZQT0 140 aa5.8□□□□□ -1.48
NUDCD3-211ENST00000497978 SPINK7P58062 85 aa5.79□□□□□ -1.48
NUDCD3-211ENST00000497978 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
NUDCD3-211ENST00000497978 LYRM7Q5U5X0 104 aa5.77□□□□□ -1.49
NUDCD3-211ENST00000497978 A0A0A0MQY5 61 aa5.76□□□□□ -1.49
NUDCD3-211ENST00000497978 A0A1B0GW54 56 aa5.76□□□□□ -1.49
NUDCD3-211ENST00000497978 JMJD7-PLA2G4BH0Y9G9 81 aa5.76□□□□□ -1.49
NUDCD3-211ENST00000497978 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
NUDCD3-211ENST00000497978 A8MWP4 228 aa5.75□□□□□ -1.49
NUDCD3-211ENST00000497978 ATXN8Q156A1 80 aa5.75□□□□□ -1.49
NUDCD3-211ENST00000497978 PDE6GP18545 87 aa5.74□□□□□ -1.49
NUDCD3-211ENST00000497978 KRTAP4-2Q9BYR5 136 aa5.74□□□□□ -1.49
NUDCD3-211ENST00000497978 C8orf17Q9NRJ1 99 aa5.74□□□□□ -1.49
NUDCD3-211ENST00000497978 LOC110117498A0A087WWA1 95 aa5.73□□□□□ -1.49
NUDCD3-211ENST00000497978 M0R143 59 aa5.72□□□□□ -1.49
NUDCD3-211ENST00000497978 WFDC13Q8IUB5 93 aa5.72□□□□□ -1.49
NUDCD3-211ENST00000497978 FCGBPQ9Y6R7 5405 aaPredicted RBP5.71□□□□□ -1.5
NUDCD3-211ENST00000497978 Q6ZVQ6 151 aa5.71□□□□□ -1.5
NUDCD3-211ENST00000497978 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
NUDCD3-211ENST00000497978 NAA38Q9BRA0 125 aaKnown RBP5.69□□□□□ -1.5
NUDCD3-211ENST00000497978 C14orf132Q9NPU4 83 aa5.69□□□□□ -1.5
NUDCD3-211ENST00000497978 LINC00846Q9NV44 126 aa5.69□□□□□ -1.5
NUDCD3-211ENST00000497978 NREPQ16612 68 aa5.68□□□□□ -1.5
NUDCD3-211ENST00000497978 PRR15Q8IV56 129 aa5.68□□□□□ -1.5
NUDCD3-211ENST00000497978 TMEM254Q8TBM7 123 aa5.65□□□□□ -1.5
NUDCD3-211ENST00000497978 MRPL34Q9BQ48 92 aaKnown RBP5.65□□□□□ -1.5
NUDCD3-211ENST00000497978 MMP24-AS1A0A0U1RRL7 71 aa5.63□□□□□ -1.51
NUDCD3-211ENST00000497978 NDUFS5O43920 106 aa5.62□□□□□ -1.51
NUDCD3-211ENST00000497978 hDV103S1A0JD37 113 aa5.61□□□□□ -1.51
NUDCD3-211ENST00000497978 H1FX-AS1Q4G0G2 97 aa5.61□□□□□ -1.51
NUDCD3-211ENST00000497978 K7EQZ3 153 aa5.59□□□□□ -1.51
NUDCD3-211ENST00000497978 KRTAP19-6Q3LI70 58 aa5.59□□□□□ -1.51
NUDCD3-211ENST00000497978 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
NUDCD3-211ENST00000497978 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
NUDCD3-211ENST00000497978 SMIM6P0DI80 62 aa5.57□□□□□ -1.52
NUDCD3-211ENST00000497978 BATFQ16520 125 aa5.57□□□□□ -1.52
NUDCD3-211ENST00000497978 IGKV2D-30A0A075B6S6 120 aa5.56□□□□□ -1.52
NUDCD3-211ENST00000497978 H3BT86 120 aa5.56□□□□□ -1.52
NUDCD3-211ENST00000497978 BPY2O14599 106 aa5.56□□□□□ -1.52
NUDCD3-211ENST00000497978 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
NUDCD3-211ENST00000497978 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
NUDCD3-211ENST00000497978 TSTD3H0UI37 97 aa5.54□□□□□ -1.52
NUDCD3-211ENST00000497978 Q5W150 140 aa5.51□□□□□ -1.53
NUDCD3-211ENST00000497978 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
NUDCD3-211ENST00000497978 A0A1W2PPM0 123 aa5.5□□□□□ -1.53
NUDCD3-211ENST00000497978 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
NUDCD3-211ENST00000497978 Q8N9L7 120 aa5.48□□□□□ -1.53
NUDCD3-211ENST00000497978 TAX1BP3O14907 124 aa5.47□□□□□ -1.53
NUDCD3-211ENST00000497978 CXCL6P80162 114 aa5.47□□□□□ -1.53
NUDCD3-211ENST00000497978 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
NUDCD3-211ENST00000497978 UBL5Q9BZL1 73 aa5.42□□□□□ -1.54
NUDCD3-211ENST00000497978 SPCS1Q9Y6A9 102 aa5.42□□□□□ -1.54
NUDCD3-211ENST00000497978 FAM236AA0A1B0GUQ0 79 aa5.41□□□□□ -1.54
NUDCD3-211ENST00000497978 FAM236BA0A1B0GV22 79 aa5.41□□□□□ -1.54
NUDCD3-211ENST00000497978 C5orf47Q569G3 176 aa5.41□□□□□ -1.54
NUDCD3-211ENST00000497978 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
NUDCD3-211ENST00000497978 PCP4L1A6NKN8 68 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms