RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 K7ERU9 68 aa10.86□□□□□ -0.67
SCAMP3-209ENST00000497470 DSCR10P59022 87 aa10.85□□□□□ -0.67
SCAMP3-209ENST00000497470 ATP5EP2Q5VTU8 51 aa10.85□□□□□ -0.67
SCAMP3-209ENST00000497470 PRR15Q8IV56 129 aa10.85□□□□□ -0.67
SCAMP3-209ENST00000497470 IGKV3D-7A0A0C4DH55 119 aa10.82□□□□□ -0.68
SCAMP3-209ENST00000497470 LINC00313P59037 77 aa10.82□□□□□ -0.68
SCAMP3-209ENST00000497470 LINC00643Q86TS7 51 aa10.82□□□□□ -0.68
SCAMP3-209ENST00000497470 CDIP1Q9H305 208 aa10.82□□□□□ -0.68
SCAMP3-209ENST00000497470 XP32Q5T750 250 aa10.81□□□□□ -0.68
SCAMP3-209ENST00000497470 IGHV6-1A0A0B4J1U7 121 aa10.77□□□□□ -0.69
SCAMP3-209ENST00000497470 C9orf92A6NGG3 77 aa10.74□□□□□ -0.69
SCAMP3-209ENST00000497470 K7EQZ3 153 aa10.74□□□□□ -0.69
SCAMP3-209ENST00000497470 C8orf17Q9NRJ1 99 aa10.74□□□□□ -0.69
SCAMP3-209ENST00000497470 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
SCAMP3-209ENST00000497470 C20orf166-AS1Q96NR2 134 aa10.73□□□□□ -0.69
SCAMP3-209ENST00000497470 KRTAP16-1A8MUX0 517 aa10.72□□□□□ -0.69
SCAMP3-209ENST00000497470 Q75L30 129 aa10.72□□□□□ -0.69
SCAMP3-209ENST00000497470 A8MUU9 505 aa10.7□□□□□ -0.7
SCAMP3-209ENST00000497470 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
SCAMP3-209ENST00000497470 MMP24-AS1A0A0U1RRL7 71 aa10.68□□□□□ -0.7
SCAMP3-209ENST00000497470 RPL37P61927 97 aaKnown RBP10.67□□□□□ -0.7
SCAMP3-209ENST00000497470 Q8N9P0 234 aaPredicted RBP10.67□□□□□ -0.7
SCAMP3-209ENST00000497470 TMEM254Q8TBM7 123 aa10.67□□□□□ -0.7
SCAMP3-209ENST00000497470 SEC61BP60468 96 aaKnown RBP10.65□□□□□ -0.7
SCAMP3-209ENST00000497470 hDV103S1A0JD37 113 aa10.64□□□□□ -0.71
SCAMP3-209ENST00000497470 Q8N9L7 120 aa10.63□□□□□ -0.71
SCAMP3-209ENST00000497470 MRPL34Q9BQ48 92 aaKnown RBP10.62□□□□□ -0.71
SCAMP3-209ENST00000497470 HCG22E2RYF7 251 aa10.61□□□□□ -0.71
SCAMP3-209ENST00000497470 IMUPQ9GZP8 106 aa10.61□□□□□ -0.71
SCAMP3-209ENST00000497470 CASC2Q6XLA1 102 aa10.59□□□□□ -0.71
SCAMP3-209ENST00000497470 LRP2P98164 4655 aa10.57□□□□□ -0.72
SCAMP3-209ENST00000497470 LPAP08519 4548 aa10.56□□□□□ -0.72
SCAMP3-209ENST00000497470 ATP11AUNQ6ZP68 121 aa10.55□□□□□ -0.72
SCAMP3-209ENST00000497470 HIST1H4AP62805 103 aaKnown RBP10.53□□□□□ -0.72
SCAMP3-209ENST00000497470 WFDC13Q8IUB5 93 aa10.51□□□□□ -0.73
SCAMP3-209ENST00000497470 TP53AIP1Q9HCN2 124 aa10.48□□□□□ -0.73
SCAMP3-209ENST00000497470 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
SCAMP3-209ENST00000497470 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.73
SCAMP3-209ENST00000497470 MT-ATP8P03928 68 aa10.43□□□□□ -0.74
SCAMP3-209ENST00000497470 NDUFS5O43920 106 aa10.41□□□□□ -0.74
SCAMP3-209ENST00000497470 A0A087WVE0 104 aa10.4□□□□□ -0.74
SCAMP3-209ENST00000497470 MUC17Q685J3 4493 aa10.34□□□□□ -0.75
SCAMP3-209ENST00000497470 UQCRQO14949 82 aa10.33□□□□□ -0.76
SCAMP3-209ENST00000497470 Q5W150 140 aa10.29□□□□□ -0.76
SCAMP3-209ENST00000497470 KRTAP4-1Q9BYQ7 146 aa10.28□□□□□ -0.76
SCAMP3-209ENST00000497470 OCR1Q9BZK8 76 aa10.28□□□□□ -0.76
SCAMP3-209ENST00000497470 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
SCAMP3-209ENST00000497470 SCGB1A1P11684 91 aa10.25□□□□□ -0.77
SCAMP3-209ENST00000497470 TRAV22A0A0B4J277 110 aa10.24□□□□□ -0.77
SCAMP3-209ENST00000497470 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
SCAMP3-209ENST00000497470 ATOX1O00244 68 aa10.23□□□□□ -0.77
SCAMP3-209ENST00000497470 FAM236AA0A1B0GUQ0 79 aa10.22□□□□□ -0.77
SCAMP3-209ENST00000497470 FAM236BA0A1B0GV22 79 aa10.22□□□□□ -0.77
SCAMP3-209ENST00000497470 SPINK7P58062 85 aa10.22□□□□□ -0.77
SCAMP3-209ENST00000497470 C5orf47Q569G3 176 aa10.2□□□□□ -0.78
SCAMP3-209ENST00000497470 C7orf65Q6ZTY9 151 aa10.2□□□□□ -0.78
SCAMP3-209ENST00000497470 A0A0U1RQV1 116 aa10.18□□□□□ -0.78
SCAMP3-209ENST00000497470 H3BPC8 53 aa10.17□□□□□ -0.78
SCAMP3-209ENST00000497470 IGKV2-30P06310 120 aa10.16□□□□□ -0.78
SCAMP3-209ENST00000497470 LOC101927531A0A1B0GV80 90 aa10.15□□□□□ -0.78
SCAMP3-209ENST00000497470 TRAV7A0A075B6U4 112 aa10.14□□□□□ -0.79
SCAMP3-209ENST00000497470 MPLKIPQ8TAP9 179 aa10.14□□□□□ -0.79
SCAMP3-209ENST00000497470 HRES1P13985 223 aa10.13□□□□□ -0.79
SCAMP3-209ENST00000497470 H0Y9P7 68 aa10.12□□□□□ -0.79
SCAMP3-209ENST00000497470 MP68P56378 58 aa10.12□□□□□ -0.79
SCAMP3-209ENST00000497470 IGKV2D-30A0A075B6S6 120 aa10.09□□□□□ -0.79
SCAMP3-209ENST00000497470 CYP4F30PQ9H0H9 118 aa10.08□□□□□ -0.8
SCAMP3-209ENST00000497470 RBM12B-AS1Q9P1G2 102 aa10.08□□□□□ -0.8
SCAMP3-209ENST00000497470 KRTAP19-2Q3LHN2 52 aa10.05□□□□□ -0.8
SCAMP3-209ENST00000497470 C1orf64Q8NEQ6 169 aa10.04□□□□□ -0.8
SCAMP3-209ENST00000497470 SERP2Q8N6R1 65 aa10.03□□□□□ -0.8
SCAMP3-209ENST00000497470 RNF213Q63HN8 5207 aa10.02□□□□□ -0.8
SCAMP3-209ENST00000497470 LINC00208Q96KT6 92 aa10.01□□□□□ -0.81
SCAMP3-209ENST00000497470 MUC2Q02817 5179 aa10□□□□□ -0.81
SCAMP3-209ENST00000497470 LCE2CQ5TA81 110 aa9.97□□□□□ -0.81
SCAMP3-209ENST00000497470 COX6B2Q6YFQ2 88 aa9.94□□□□□ -0.82
SCAMP3-209ENST00000497470 FAM236DA0A1B0GTK5 79 aa9.89□□□□□ -0.83
SCAMP3-209ENST00000497470 FAM236CP0DP71 79 aa9.89□□□□□ -0.83
SCAMP3-209ENST00000497470 COX7CP15954 63 aa9.89□□□□□ -0.83
SCAMP3-209ENST00000497470 C4orf26Q17RF5 130 aa9.87□□□□□ -0.83
SCAMP3-209ENST00000497470 KLKP1Q107X0 134 aa9.85□□□□□ -0.83
SCAMP3-209ENST00000497470 H1FX-AS1Q4G0G2 97 aa9.84□□□□□ -0.83
SCAMP3-209ENST00000497470 A8MUN3 132 aa9.82□□□□□ -0.84
SCAMP3-209ENST00000497470 LCE2AQ5TA79 106 aaPredicted RBP9.82□□□□□ -0.84
SCAMP3-209ENST00000497470 ANAPC13Q9BS18 74 aa9.82□□□□□ -0.84
SCAMP3-209ENST00000497470 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
SCAMP3-209ENST00000497470 MT1HP80294 61 aa9.79□□□□□ -0.84
SCAMP3-209ENST00000497470 KRTAP3-1Q9BYR8 98 aa9.78□□□□□ -0.84
SCAMP3-209ENST00000497470 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
SCAMP3-209ENST00000497470 NDUFC1O43677 76 aa9.75□□□□□ -0.85
SCAMP3-209ENST00000497470 SNURFQ9Y675 71 aa9.73□□□□□ -0.85
SCAMP3-209ENST00000497470 SPANXA2-OT1Q8N9U9 137 aa9.72□□□□□ -0.85
SCAMP3-209ENST00000497470 DMAC1Q96GE9 116 aa9.68□□□□□ -0.86
SCAMP3-209ENST00000497470 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
SCAMP3-209ENST00000497470 M0R2T5 61 aa9.61□□□□□ -0.87
SCAMP3-209ENST00000497470 S4R3F8 94 aa9.59□□□□□ -0.87
SCAMP3-209ENST00000497470 H7BZZ5 65 aa9.58□□□□□ -0.88
SCAMP3-209ENST00000497470 ACYP2P14621 99 aa9.57□□□□□ -0.88
SCAMP3-209ENST00000497470 CCDC179H3BU77 68 aa9.54□□□□□ -0.88
SCAMP3-209ENST00000497470 KRTAP10-6P60371 365 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms