RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 ATXN8Q156A1 80 aa9.82□□□□□ -0.84
COL20A1-208ENST00000496810 Q6ZQT0 140 aa9.82□□□□□ -0.84
COL20A1-208ENST00000496810 KRTAP9-8Q9BYQ0 159 aa9.81□□□□□ -0.84
COL20A1-208ENST00000496810 C8orf87E5RJ46 101 aa9.8□□□□□ -0.84
COL20A1-208ENST00000496810 MPLKIPQ8TAP9 179 aa9.8□□□□□ -0.84
COL20A1-208ENST00000496810 FAM236DA0A1B0GTK5 79 aa9.76□□□□□ -0.85
COL20A1-208ENST00000496810 FAM236CP0DP71 79 aa9.76□□□□□ -0.85
COL20A1-208ENST00000496810 C14orf132Q9NPU4 83 aa9.76□□□□□ -0.85
COL20A1-208ENST00000496810 LOC110117498A0A087WWA1 95 aa9.75□□□□□ -0.85
COL20A1-208ENST00000496810 J3KT08 172 aa9.74□□□□□ -0.85
COL20A1-208ENST00000496810 JMJD7-PLA2G4BH0Y9G9 81 aa9.73□□□□□ -0.85
COL20A1-208ENST00000496810 BATFQ16520 125 aa9.73□□□□□ -0.85
COL20A1-208ENST00000496810 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
COL20A1-208ENST00000496810 C21orf62-AS1Q17RA5 79 aa9.7□□□□□ -0.86
COL20A1-208ENST00000496810 IGKV3D-7A0A0C4DH55 119 aa9.69□□□□□ -0.86
COL20A1-208ENST00000496810 A8MWP4 228 aa9.69□□□□□ -0.86
COL20A1-208ENST00000496810 USH2AO75445 5202 aa9.69□□□□□ -0.86
COL20A1-208ENST00000496810 RBM12B-AS1Q9P1G2 102 aa9.69□□□□□ -0.86
COL20A1-208ENST00000496810 MT2AP02795 61 aa9.68□□□□□ -0.86
COL20A1-208ENST00000496810 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
COL20A1-208ENST00000496810 C8orf17Q9NRJ1 99 aa9.68□□□□□ -0.86
COL20A1-208ENST00000496810 TSTD3H0UI37 97 aa9.67□□□□□ -0.86
COL20A1-208ENST00000496810 SSPOA2VEC9 5147 aa9.66□□□□□ -0.86
COL20A1-208ENST00000496810 NDUFB1O75438 58 aa9.66□□□□□ -0.86
COL20A1-208ENST00000496810 MTURNQ8N3F0 131 aa9.66□□□□□ -0.86
COL20A1-208ENST00000496810 LYRM7Q5U5X0 104 aa9.65□□□□□ -0.86
COL20A1-208ENST00000496810 PDE6GP18545 87 aa9.64□□□□□ -0.87
COL20A1-208ENST00000496810 SPINK7P58062 85 aa9.64□□□□□ -0.87
COL20A1-208ENST00000496810 A0A1B0GW54 56 aa9.63□□□□□ -0.87
COL20A1-208ENST00000496810 LOC105371267A0A1B0GV96 52 aa9.62□□□□□ -0.87
COL20A1-208ENST00000496810 MT1FP04733 61 aa9.62□□□□□ -0.87
COL20A1-208ENST00000496810 TAX1BP3O14907 124 aa9.6□□□□□ -0.87
COL20A1-208ENST00000496810 C9orf118A6NHY6 69 aa9.59□□□□□ -0.87
COL20A1-208ENST00000496810 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
COL20A1-208ENST00000496810 Q6ZVQ6 151 aa9.58□□□□□ -0.88
COL20A1-208ENST00000496810 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
COL20A1-208ENST00000496810 A0A1W2PPM0 123 aa9.56□□□□□ -0.88
COL20A1-208ENST00000496810 NREPQ16612 68 aa9.56□□□□□ -0.88
COL20A1-208ENST00000496810 H3BT86 120 aa9.55□□□□□ -0.88
COL20A1-208ENST00000496810 WFDC13Q8IUB5 93 aa9.55□□□□□ -0.88
COL20A1-208ENST00000496810 K7EQZ3 153 aa9.54□□□□□ -0.88
COL20A1-208ENST00000496810 LCE2BO14633 110 aa9.5□□□□□ -0.89
COL20A1-208ENST00000496810 TMEM254Q8TBM7 123 aa9.5□□□□□ -0.89
COL20A1-208ENST00000496810 MRPL34Q9BQ48 92 aaKnown RBP9.5□□□□□ -0.89
COL20A1-208ENST00000496810 KRTAP9-3Q9BYQ3 159 aa9.49□□□□□ -0.89
COL20A1-208ENST00000496810 KRTAP10-10P60014 251 aa9.48□□□□□ -0.89
COL20A1-208ENST00000496810 hDV103S1A0JD37 113 aa9.45□□□□□ -0.9
COL20A1-208ENST00000496810 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
COL20A1-208ENST00000496810 Q8N9L7 120 aa9.43□□□□□ -0.9
COL20A1-208ENST00000496810 SPCS1Q9Y6A9 102 aa9.43□□□□□ -0.9
COL20A1-208ENST00000496810 BPY2O14599 106 aa9.41□□□□□ -0.9
COL20A1-208ENST00000496810 NDUFS5O43920 106 aa9.41□□□□□ -0.9
COL20A1-208ENST00000496810 Q5W150 140 aa9.38□□□□□ -0.91
COL20A1-208ENST00000496810 FCGBPQ9Y6R7 5405 aaPredicted RBP9.37□□□□□ -0.91
COL20A1-208ENST00000496810 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.35□□□□□ -0.91
COL20A1-208ENST00000496810 PRO0461Q9UI25 63 aa9.34□□□□□ -0.91
COL20A1-208ENST00000496810 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
COL20A1-208ENST00000496810 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
COL20A1-208ENST00000496810 KRTAP19-1Q8IUB9 90 aa9.33□□□□□ -0.92
COL20A1-208ENST00000496810 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
COL20A1-208ENST00000496810 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
COL20A1-208ENST00000496810 HCG22E2RYF7 251 aa9.28□□□□□ -0.92
COL20A1-208ENST00000496810 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
COL20A1-208ENST00000496810 COL5A1-AS1Q5SY13 56 aa9.27□□□□□ -0.93
COL20A1-208ENST00000496810 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
COL20A1-208ENST00000496810 K7EP34 96 aa9.26□□□□□ -0.93
COL20A1-208ENST00000496810 KRTAP9-7A8MTY7 169 aa9.22□□□□□ -0.93
COL20A1-208ENST00000496810 C4orf26Q17RF5 130 aa9.19□□□□□ -0.94
COL20A1-208ENST00000496810 UBL5Q9BZL1 73 aa9.19□□□□□ -0.94
COL20A1-208ENST00000496810 MACF1Q9UPN3 7388 aaKnown RBP9.18□□□□□ -0.94
COL20A1-208ENST00000496810 CXCL6P80162 114 aa9.16□□□□□ -0.94
COL20A1-208ENST00000496810 KRTAP19-6Q3LI70 58 aa9.11□□□□□ -0.95
COL20A1-208ENST00000496810 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
COL20A1-208ENST00000496810 PCP4L1A6NKN8 68 aa9.07□□□□□ -0.96
COL20A1-208ENST00000496810 ETDBQ3ZM63 59 aa9.07□□□□□ -0.96
COL20A1-208ENST00000496810 SYNE2Q8WXH0 6885 aaKnown RBP9.07□□□□□ -0.96
COL20A1-208ENST00000496810 GTF2H5Q6ZYL4 71 aa9.06□□□□□ -0.96
COL20A1-208ENST00000496810 C5orf47Q569G3 176 aa9.02□□□□□ -0.97
COL20A1-208ENST00000496810 F8W1H4 67 aa9.01□□□□□ -0.97
COL20A1-208ENST00000496810 C1orf64Q8NEQ6 169 aa8.97□□□□□ -0.97
COL20A1-208ENST00000496810 S4R3F8 94 aa8.95□□□□□ -0.98
COL20A1-208ENST00000496810 LCA10Q71F78 164 aa8.94□□□□□ -0.98
COL20A1-208ENST00000496810 TP53AIP1Q9HCN2 124 aa8.94□□□□□ -0.98
COL20A1-208ENST00000496810 FAM236AA0A1B0GUQ0 79 aa8.88□□□□□ -0.99
COL20A1-208ENST00000496810 FAM236BA0A1B0GV22 79 aa8.88□□□□□ -0.99
COL20A1-208ENST00000496810 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
COL20A1-208ENST00000496810 CSAG1Q6PB30 78 aa8.84□□□□□ -0.99
COL20A1-208ENST00000496810 A0A087WVE0 104 aa8.83□□□□□ -1
COL20A1-208ENST00000496810 KRTAP3-3Q9BYR6 98 aa8.83□□□□□ -1
COL20A1-208ENST00000496810 TRAV22A0A0B4J277 110 aa8.81□□□□□ -1
COL20A1-208ENST00000496810 MT1BP07438 61 aa8.81□□□□□ -1
COL20A1-208ENST00000496810 FAM240AA0A1B0GVK7 77 aa8.77□□□□□ -1.01
COL20A1-208ENST00000496810 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
COL20A1-208ENST00000496810 ACYP1P07311 99 aa8.76□□□□□ -1.01
COL20A1-208ENST00000496810 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
COL20A1-208ENST00000496810 HIST1H4AP62805 103 aaKnown RBP8.74□□□□□ -1.01
COL20A1-208ENST00000496810 KRTAP19-8Q3LI54 63 aa8.74□□□□□ -1.01
COL20A1-208ENST00000496810 ATP5EP2Q5VTU8 51 aa8.74□□□□□ -1.01
COL20A1-208ENST00000496810 KLKP1Q107X0 134 aa8.7□□□□□ -1.02
COL20A1-208ENST00000496810 Q5VV11 94 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms