RNA–Protein interactions for RNA: ENST00000496804.5

MACF1-224, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 5,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-224ENST00000496804 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
MACF1-224ENST00000496804 TEP1Q99973 2627 aaKnown RBP5.02□□□□□ -1.61
MACF1-224ENST00000496804 Q6ZSA8 131 aa5.01□□□□□ -1.61
MACF1-224ENST00000496804 ZANQ9Y493 2812 aa4.99□□□□□ -1.61
MACF1-224ENST00000496804 EYSQ5T1H1 3165 aa4.98□□□□□ -1.61
MACF1-224ENST00000496804 STAB2Q8WWQ8 2551 aa4.98□□□□□ -1.61
MACF1-224ENST00000496804 H0YAA0 97 aa4.97□□□□□ -1.61
MACF1-224ENST00000496804 S4R3F8 94 aa4.97□□□□□ -1.61
MACF1-224ENST00000496804 COX6B2Q6YFQ2 88 aa4.97□□□□□ -1.61
MACF1-224ENST00000496804 FLNCQ14315 2725 aa4.97□□□□□ -1.61
MACF1-224ENST00000496804 CSMD1Q96PZ7 3565 aa4.95□□□□□ -1.62
MACF1-224ENST00000496804 FBN2P35556 2912 aa4.94□□□□□ -1.62
MACF1-224ENST00000496804 HIVEP1P15822 2718 aa4.94□□□□□ -1.62
MACF1-224ENST00000496804 CELSR2Q9HCU4 2923 aa4.94□□□□□ -1.62
MACF1-224ENST00000496804 ZFHX4Q86UP3 3567 aa4.93□□□□□ -1.62
MACF1-224ENST00000496804 NSD1Q96L73 2696 aaPredicted RBP4.92□□□□□ -1.62
MACF1-224ENST00000496804 SMR3BP02814 79 aaPredicted RBP4.92□□□□□ -1.62
MACF1-224ENST00000496804 C10orf95Q9H7T3 257 aa4.89□□□□□ -1.63
MACF1-224ENST00000496804 IGSF10Q6WRI0 2623 aa4.89□□□□□ -1.63
MACF1-224ENST00000496804 NF1P21359 2839 aa4.89□□□□□ -1.63
MACF1-224ENST00000496804 KRTAP13-3Q3SY46 172 aa4.88□□□□□ -1.63
MACF1-224ENST00000496804 CAMK2N1Q7Z7J9 78 aa4.87□□□□□ -1.63
MACF1-224ENST00000496804 NIPBLQ6KC79 2804 aaeCLIP4.87□□□□□ -1.631e-5■■■■□ 22.3
MACF1-224ENST00000496804 SMG1Q96Q15 3661 aaKnown RBP4.85□□□□□ -1.63
MACF1-224ENST00000496804 DCHS2Q6V1P9 2916 aa4.85□□□□□ -1.63
MACF1-224ENST00000496804 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
MACF1-224ENST00000496804 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
MACF1-224ENST00000496804 R4GN34 69 aa4.84□□□□□ -1.64
MACF1-224ENST00000496804 MXRA5Q9NR99 2828 aa4.83□□□□□ -1.64
MACF1-224ENST00000496804 ASPMQ8IZT6 3477 aa4.8□□□□□ -1.64
MACF1-224ENST00000496804 M0QZ58 72 aa4.8□□□□□ -1.64
MACF1-224ENST00000496804 P0C880 135 aa4.79□□□□□ -1.64
MACF1-224ENST00000496804 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
MACF1-224ENST00000496804 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
MACF1-224ENST00000496804 KRTAP10-1P60331 282 aa4.77□□□□□ -1.65
MACF1-224ENST00000496804 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
MACF1-224ENST00000496804 RPS29P62273 56 aaKnown RBP4.75□□□□□ -1.65
MACF1-224ENST00000496804 CRYBG3Q68DQ2 2970 aa4.75□□□□□ -1.65
MACF1-224ENST00000496804 RELNP78509 3460 aa4.75□□□□□ -1.65
MACF1-224ENST00000496804 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
MACF1-224ENST00000496804 ZFHX3Q15911 3703 aa4.74□□□□□ -1.65
MACF1-224ENST00000496804 TGP01266 2768 aa4.73□□□□□ -1.65
MACF1-224ENST00000496804 CELSR1Q9NYQ6 3014 aa4.73□□□□□ -1.65
MACF1-224ENST00000496804 DMDP11532 3685 aa4.72□□□□□ -1.65
MACF1-224ENST00000496804 LAMA5O15230 3695 aa4.71□□□□□ -1.66
MACF1-224ENST00000496804 SVEP1Q4LDE5 3571 aa4.71□□□□□ -1.66
MACF1-224ENST00000496804 SPENQ96T58 3664 aaKnown RBP4.7□□□□□ -1.66
MACF1-224ENST00000496804 TPRXLQ17RH7 258 aa4.69□□□□□ -1.66
MACF1-224ENST00000496804 KMT2BQ9UMN6 2715 aaPredicted RBP4.67□□□□□ -1.66
MACF1-224ENST00000496804 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
MACF1-224ENST00000496804 CUBNO60494 3623 aa4.63□□□□□ -1.67
MACF1-224ENST00000496804 PDZD2O15018 2839 aa4.62□□□□□ -1.67
MACF1-224ENST00000496804 KRTAP1-4P0C5Y4 121 aa4.61□□□□□ -1.67
MACF1-224ENST00000496804 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
MACF1-224ENST00000496804 KRTAP15-1Q3LI76 137 aa4.57□□□□□ -1.68
MACF1-224ENST00000496804 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
MACF1-224ENST00000496804 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
MACF1-224ENST00000496804 KRTAP12-2P59991 146 aa4.54□□□□□ -1.68
MACF1-224ENST00000496804 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
MACF1-224ENST00000496804 VWFP04275 2813 aa4.52□□□□□ -1.69
MACF1-224ENST00000496804 PKD1L1Q8TDX9 2849 aa4.49□□□□□ -1.69
MACF1-224ENST00000496804 TNP1P09430 55 aa4.48□□□□□ -1.69
MACF1-224ENST00000496804 TENM1Q9UKZ4 2725 aa4.47□□□□□ -1.69
MACF1-224ENST00000496804 KRTAP12-1P59990 96 aa4.46□□□□□ -1.69
MACF1-224ENST00000496804 J3QL48 77 aa4.46□□□□□ -1.7
MACF1-224ENST00000496804 KRTAP13-4Q3LI77 160 aa4.46□□□□□ -1.7
MACF1-224ENST00000496804 TENM4Q6N022 2769 aa4.45□□□□□ -1.7
MACF1-224ENST00000496804 MUC3AQ02505 3323 aa4.43□□□□□ -1.7
MACF1-224ENST00000496804 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
MACF1-224ENST00000496804 Q5VSD8 79 aa4.42□□□□□ -1.7
MACF1-224ENST00000496804 TENM2Q9NT68 2774 aa4.4□□□□□ -1.71
MACF1-224ENST00000496804 XP32Q5T750 250 aa4.39□□□□□ -1.71
MACF1-224ENST00000496804 KRTAP21-3Q3LHN1 58 aa4.34□□□□□ -1.71
MACF1-224ENST00000496804 CSMD2Q7Z408 3487 aa4.34□□□□□ -1.72
MACF1-224ENST00000496804 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
MACF1-224ENST00000496804 FBN3Q75N90 2809 aa4.32□□□□□ -1.72
MACF1-224ENST00000496804 M0R2T5 61 aa4.32□□□□□ -1.72
MACF1-224ENST00000496804 OTOGQ6ZRI0 2925 aa4.31□□□□□ -1.72
MACF1-224ENST00000496804 BSNQ9UPA5 3926 aa4.3□□□□□ -1.72
MACF1-224ENST00000496804 COL7A1Q02388 2944 aa4.3□□□□□ -1.72
MACF1-224ENST00000496804 KRTAP3-2Q9BYR7 98 aa4.29□□□□□ -1.72
MACF1-224ENST00000496804 MEGF8Q7Z7M0 2845 aa4.28□□□□□ -1.72
MACF1-224ENST00000496804 VPS13CQ709C8 3753 aa4.26□□□□□ -1.73
MACF1-224ENST00000496804 KRTAP3-3Q9BYR6 98 aa4.24□□□□□ -1.73
MACF1-224ENST00000496804 TRRAPQ9Y4A5 3859 aa4.19□□□□□ -1.74
MACF1-224ENST00000496804 ANK3Q12955 4377 aaKnown RBP4.18□□□□□ -1.74
MACF1-224ENST00000496804 PRO2289Q9P1D8 64 aa4.17□□□□□ -1.74
MACF1-224ENST00000496804 ALMS1Q8TCU4 4167 aa4.16□□□□□ -1.74
MACF1-224ENST00000496804 NBPF19A0A087WUL8 3843 aa4.16□□□□□ -1.74
MACF1-224ENST00000496804 INE1O15225 51 aa4.15□□□□□ -1.75
MACF1-224ENST00000496804 AKAP9Q99996 3911 aa4.08□□□□□ -1.76
MACF1-224ENST00000496804 CSMD3Q7Z407 3707 aa4.08□□□□□ -1.76
MACF1-224ENST00000496804 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
MACF1-224ENST00000496804 HUWE1Q7Z6Z7 4374 aaKnown RBP3.97□□□□□ -1.77
MACF1-224ENST00000496804 ZNF469Q96JG9 3925 aaPredicted RBP3.92□□□□□ -1.78
MACF1-224ENST00000496804 KRTAP23-1A1A580 65 aa3.91□□□□□ -1.78
MACF1-224ENST00000496804 DNAH10Q8IVF4 4471 aa3.91□□□□□ -1.78
MACF1-224ENST00000496804 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
MACF1-224ENST00000496804 LORP23490 312 aaPredicted RBP3.85□□□□□ -1.79
MACF1-224ENST00000496804 DNAH8Q96JB1 4490 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms