RNA–Protein interactions for RNA: ENST00000496700.5

CRIP1-206, Transcript of cysteine rich protein 1, humanhuman

TSL 2

Gene CRIP1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIP1-206ENST00000496700 CD164Q04900 197 aa13.58□□□□□ -0.24
CRIP1-206ENST00000496700 SSBP3-AS1Q7Z2R9 100 aa13.58□□□□□ -0.24
CRIP1-206ENST00000496700 PRR4Q16378 134 aa13.57□□□□□ -0.24
CRIP1-206ENST00000496700 SPANXA2-OT1Q8N9U9 137 aa13.54□□□□□ -0.24
CRIP1-206ENST00000496700 MRPL34Q9BQ48 92 aaKnown RBP13.52□□□□□ -0.25
CRIP1-206ENST00000496700 A0A087X002 238 aa13.51□□□□□ -0.25
CRIP1-206ENST00000496700 NOTCH2NLQ7Z3S9 236 aa13.51□□□□□ -0.25
CRIP1-206ENST00000496700 SPINK6Q6UWN8 80 aa13.5□□□□□ -0.25
CRIP1-206ENST00000496700 NDUFS5O43920 106 aa13.48□□□□□ -0.25
CRIP1-206ENST00000496700 MPLKIPQ8TAP9 179 aa13.48□□□□□ -0.25
CRIP1-206ENST00000496700 LRP1BQ9NZR2 4599 aa13.44□□□□□ -0.26
CRIP1-206ENST00000496700 KRTAP13-2Q52LG2 175 aa13.44□□□□□ -0.26
CRIP1-206ENST00000496700 SACSQ9NZJ4 4579 aa13.37□□□□□ -0.27
CRIP1-206ENST00000496700 IGLV7-46A0A075B6I9 117 aa13.36□□□□□ -0.27
CRIP1-206ENST00000496700 C8orf87E5RJ46 101 aa13.35□□□□□ -0.27
CRIP1-206ENST00000496700 KRTAP1-4P0C5Y4 121 aa13.35□□□□□ -0.27
CRIP1-206ENST00000496700 PCOTHQ58A44 107 aa13.35□□□□□ -0.27
CRIP1-206ENST00000496700 Q1T7F1 81 aa13.34□□□□□ -0.27
CRIP1-206ENST00000496700 LINC00336Q6ZUF6 198 aa13.34□□□□□ -0.27
CRIP1-206ENST00000496700 C1orf195Q5TG92 126 aa13.29□□□□□ -0.28
CRIP1-206ENST00000496700 VPS13BQ7Z7G8 4022 aa13.28□□□□□ -0.28
CRIP1-206ENST00000496700 KRTAP13-3Q3SY46 172 aa13.26□□□□□ -0.29
CRIP1-206ENST00000496700 Q5W150 140 aa13.26□□□□□ -0.29
CRIP1-206ENST00000496700 LINC00313P59037 77 aa13.24□□□□□ -0.29
CRIP1-206ENST00000496700 LOC101927531A0A1B0GV80 90 aa13.23□□□□□ -0.29
CRIP1-206ENST00000496700 LIMD2Q9BT23 127 aa13.23□□□□□ -0.29
CRIP1-206ENST00000496700 A0A1B0GVY2 172 aa13.22□□□□□ -0.29
CRIP1-206ENST00000496700 PKHD1P08F94 4074 aa13.2□□□□□ -0.3
CRIP1-206ENST00000496700 PLA2G1BP04054 148 aaKnown RBP13.2□□□□□ -0.3
CRIP1-206ENST00000496700 COA5Q86WW8 74 aa13.2□□□□□ -0.3
CRIP1-206ENST00000496700 V9GYY9 64 aa13.18□□□□□ -0.3
CRIP1-206ENST00000496700 Q8N9P0 234 aaPredicted RBP13.17□□□□□ -0.3
CRIP1-206ENST00000496700 PRO0628Q9UI54 55 aa13.17□□□□□ -0.3
CRIP1-206ENST00000496700 TYMSOSQ8TAI1 123 aa13.16□□□□□ -0.3
CRIP1-206ENST00000496700 C4orf48Q5BLP8 95 aa13.14□□□□□ -0.31
CRIP1-206ENST00000496700 BRK1Q8WUW1 75 aa13.13□□□□□ -0.31
CRIP1-206ENST00000496700 DYNC1H1Q14204 4646 aaKnown RBP13.13□□□□□ -0.31
CRIP1-206ENST00000496700 PSPHP1O15172 72 aa13.12□□□□□ -0.31
CRIP1-206ENST00000496700 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
CRIP1-206ENST00000496700 KRTAP16-1A8MUX0 517 aa13.1□□□□□ -0.31
CRIP1-206ENST00000496700 SPINK1P00995 79 aa13.09□□□□□ -0.31
CRIP1-206ENST00000496700 SMR3BP02814 79 aaPredicted RBP13.08□□□□□ -0.32
CRIP1-206ENST00000496700 A8MUN3 132 aa13.05□□□□□ -0.32
CRIP1-206ENST00000496700 HRES1P13985 223 aa13.05□□□□□ -0.32
CRIP1-206ENST00000496700 RYR2Q92736 4967 aa13.04□□□□□ -0.32
CRIP1-206ENST00000496700 PRR26Q8N8Z3 221 aa13.01□□□□□ -0.33
CRIP1-206ENST00000496700 RETNLBQ9BQ08 111 aa13.01□□□□□ -0.33
CRIP1-206ENST00000496700 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
CRIP1-206ENST00000496700 Q5VV11 94 aa12.98□□□□□ -0.33
CRIP1-206ENST00000496700 LINC00304Q8N9R0 145 aa12.98□□□□□ -0.33
CRIP1-206ENST00000496700 APOBP04114 4563 aaKnown RBP12.98□□□□□ -0.33
CRIP1-206ENST00000496700 IGKV2-30P06310 120 aa12.97□□□□□ -0.33
CRIP1-206ENST00000496700 RPS29P62273 56 aaKnown RBP12.97□□□□□ -0.33
CRIP1-206ENST00000496700 PRR15LQ9BU68 103 aa12.94□□□□□ -0.34
CRIP1-206ENST00000496700 SPAG11AQ6PDA7 123 aa12.94□□□□□ -0.34
CRIP1-206ENST00000496700 ACYP2P14621 99 aa12.89□□□□□ -0.35
CRIP1-206ENST00000496700 DMAC1Q96GE9 116 aa12.88□□□□□ -0.35
CRIP1-206ENST00000496700 LINC01558Q9Y6Z2 57 aa12.88□□□□□ -0.35
CRIP1-206ENST00000496700 KMT2CQ8NEZ4 4911 aaKnown RBP12.88□□□□□ -0.35
CRIP1-206ENST00000496700 FAT1Q14517 4588 aa12.85□□□□□ -0.35
CRIP1-206ENST00000496700 CHKB-CPT1BH3BT56 60 aa12.84□□□□□ -0.35
CRIP1-206ENST00000496700 Q75L30 129 aa12.84□□□□□ -0.35
CRIP1-206ENST00000496700 IGKV2D-30A0A075B6S6 120 aa12.8□□□□□ -0.36
CRIP1-206ENST00000496700 PKHD1L1Q86WI1 4243 aa12.76□□□□□ -0.37
CRIP1-206ENST00000496700 A6NED7 52 aa12.68□□□□□ -0.38
CRIP1-206ENST00000496700 A8MU10 97 aa12.68□□□□□ -0.38
CRIP1-206ENST00000496700 C7orf65Q6ZTY9 151 aa12.64□□□□□ -0.39
CRIP1-206ENST00000496700 C9orf92A6NGG3 77 aa12.62□□□□□ -0.39
CRIP1-206ENST00000496700 LCA10Q71F78 164 aa12.61□□□□□ -0.39
CRIP1-206ENST00000496700 C20orf166-AS1Q96NR2 134 aa12.61□□□□□ -0.39
CRIP1-206ENST00000496700 A8MUU9 505 aa12.6□□□□□ -0.39
CRIP1-206ENST00000496700 Q5VSD8 79 aa12.56□□□□□ -0.4
CRIP1-206ENST00000496700 CDC42SE1Q9NRR8 79 aa12.55□□□□□ -0.4
CRIP1-206ENST00000496700 SPINK7P58062 85 aa12.54□□□□□ -0.4
CRIP1-206ENST00000496700 RYR3Q15413 4870 aa12.53□□□□□ -0.4
CRIP1-206ENST00000496700 HSPG2P98160 4391 aa12.5□□□□□ -0.41
CRIP1-206ENST00000496700 KRTAP10-8P60410 259 aa12.49□□□□□ -0.41
CRIP1-206ENST00000496700 Q8N1X5 172 aa12.49□□□□□ -0.41
CRIP1-206ENST00000496700 FLG2Q5D862 2391 aaPredicted RBP12.48□□□□□ -0.41
CRIP1-206ENST00000496700 ATP11AUNQ6ZP68 121 aa12.46□□□□□ -0.42
CRIP1-206ENST00000496700 A0A1B0GU69 56 aa12.45□□□□□ -0.42
CRIP1-206ENST00000496700 SPTSSBQ8NFR3 76 aa12.43□□□□□ -0.42
CRIP1-206ENST00000496700 RYR1P21817 5038 aa12.42□□□□□ -0.42
CRIP1-206ENST00000496700 TNXBP22105 4242 aa12.41□□□□□ -0.42
CRIP1-206ENST00000496700 PMAIP1Q13794 54 aa12.41□□□□□ -0.42
CRIP1-206ENST00000496700 LRP1Q07954 4544 aaKnown RBP12.38□□□□□ -0.43
CRIP1-206ENST00000496700 KRTAP17-1Q9BYP8 105 aa12.37□□□□□ -0.43
CRIP1-206ENST00000496700 FAT3Q8TDW7 4589 aa12.33□□□□□ -0.44
CRIP1-206ENST00000496700 KRTAP3-1Q9BYR8 98 aa12.26□□□□□ -0.45
CRIP1-206ENST00000496700 A6NN06 94 aa12.24□□□□□ -0.45
CRIP1-206ENST00000496700 KIAA1109Q2LD37 5005 aa12.21□□□□□ -0.45
CRIP1-206ENST00000496700 UQCR11O14957 56 aa12.19□□□□□ -0.46
CRIP1-206ENST00000496700 SPATA8Q6RVD6 105 aa12.19□□□□□ -0.46
CRIP1-206ENST00000496700 MT1HL1P0DM35 61 aa12.18□□□□□ -0.46
CRIP1-206ENST00000496700 MIR22HGQ0VDD5 57 aa12.14□□□□□ -0.47
CRIP1-206ENST00000496700 SEC61GP60059 68 aa12.13□□□□□ -0.47
CRIP1-206ENST00000496700 COX6B2Q6YFQ2 88 aa12.13□□□□□ -0.47
CRIP1-206ENST00000496700 DMBT1Q9UGM3 2413 aaPredicted RBP12.12□□□□□ -0.47
CRIP1-206ENST00000496700 RPL37P61927 97 aaKnown RBP12.1□□□□□ -0.47
CRIP1-206ENST00000496700 KTN1-AS1Q86SY8 53 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms