RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 Q96NJ1 140 aa5.64□□□□□ -1.51
C4A-258ENST00000496659 RETNLBQ9BQ08 111 aa5.64□□□□□ -1.51
C4A-258ENST00000496659 CXCL6P80162 114 aa5.62□□□□□ -1.51
C4A-258ENST00000496659 PRR4Q16378 134 aa5.62□□□□□ -1.51
C4A-258ENST00000496659 DEFB116Q30KQ4 102 aa5.62□□□□□ -1.51
C4A-258ENST00000496659 LINC00643Q86TS7 51 aa5.62□□□□□ -1.51
C4A-258ENST00000496659 A8MWP4 228 aa5.61□□□□□ -1.51
C4A-258ENST00000496659 LRP2P98164 4655 aa5.61□□□□□ -1.51
C4A-258ENST00000496659 IGLV7-46A0A075B6I9 117 aa5.6□□□□□ -1.51
C4A-258ENST00000496659 A0A1B0GVX0 72 aa5.59□□□□□ -1.51
C4A-258ENST00000496659 C8orf87E5RJ46 101 aa5.58□□□□□ -1.52
C4A-258ENST00000496659 IGHV6-1A0A0B4J1U7 121 aa5.57□□□□□ -1.52
C4A-258ENST00000496659 DSCR10P59022 87 aa5.57□□□□□ -1.52
C4A-258ENST00000496659 CDIP1Q9H305 208 aa5.57□□□□□ -1.52
C4A-258ENST00000496659 IGKV3D-7A0A0C4DH55 119 aa5.56□□□□□ -1.52
C4A-258ENST00000496659 K7EQZ3 153 aa5.56□□□□□ -1.52
C4A-258ENST00000496659 PRR15Q8IV56 129 aa5.56□□□□□ -1.52
C4A-258ENST00000496659 TPRXLQ17RH7 258 aa5.55□□□□□ -1.52
C4A-258ENST00000496659 LINC00313P59037 77 aa5.54□□□□□ -1.52
C4A-258ENST00000496659 HIST1H4AP62805 103 aaKnown RBP5.53□□□□□ -1.52
C4A-258ENST00000496659 Q8N9L7 120 aa5.52□□□□□ -1.53
C4A-258ENST00000496659 C8orf17Q9NRJ1 99 aa5.52□□□□□ -1.53
C4A-258ENST00000496659 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
C4A-258ENST00000496659 C9orf92A6NGG3 77 aa5.51□□□□□ -1.53
C4A-258ENST00000496659 KRTAP13-3Q3SY46 172 aa5.51□□□□□ -1.53
C4A-258ENST00000496659 IMUPQ9GZP8 106 aa5.51□□□□□ -1.53
C4A-258ENST00000496659 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
C4A-258ENST00000496659 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
C4A-258ENST00000496659 hDV103S1A0JD37 113 aa5.49□□□□□ -1.53
C4A-258ENST00000496659 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
C4A-258ENST00000496659 TMEM254Q8TBM7 123 aa5.49□□□□□ -1.53
C4A-258ENST00000496659 LPAP08519 4548 aa5.48□□□□□ -1.53
C4A-258ENST00000496659 MT-ATP8P03928 68 aa5.47□□□□□ -1.53
C4A-258ENST00000496659 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
C4A-258ENST00000496659 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
C4A-258ENST00000496659 XP32Q5T750 250 aa5.45□□□□□ -1.54
C4A-258ENST00000496659 NOTCH2NLQ7Z3S9 236 aa5.45□□□□□ -1.54
C4A-258ENST00000496659 A0A087WVE0 104 aa5.44□□□□□ -1.54
C4A-258ENST00000496659 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
C4A-258ENST00000496659 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
C4A-258ENST00000496659 NDUFS5O43920 106 aa5.43□□□□□ -1.54
C4A-258ENST00000496659 Q75L30 129 aa5.43□□□□□ -1.54
C4A-258ENST00000496659 C20orf166-AS1Q96NR2 134 aa5.43□□□□□ -1.54
C4A-258ENST00000496659 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
C4A-258ENST00000496659 A8MUU9 505 aa5.42□□□□□ -1.54
C4A-258ENST00000496659 RPL37P61927 97 aaKnown RBP5.42□□□□□ -1.54
C4A-258ENST00000496659 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
C4A-258ENST00000496659 SCGB1A1P11684 91 aa5.41□□□□□ -1.54
C4A-258ENST00000496659 SEC61BP60468 96 aaKnown RBP5.4□□□□□ -1.54
C4A-258ENST00000496659 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.54
C4A-258ENST00000496659 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
C4A-258ENST00000496659 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
C4A-258ENST00000496659 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
C4A-258ENST00000496659 SMIM20Q8N5G0 67 aa5.36□□□□□ -1.55
C4A-258ENST00000496659 ATOX1O00244 68 aa5.35□□□□□ -1.55
C4A-258ENST00000496659 ZCCHC13Q8WW36 166 aaKnown RBP5.35□□□□□ -1.55
C4A-258ENST00000496659 UQCRQO14949 82 aa5.34□□□□□ -1.55
C4A-258ENST00000496659 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
C4A-258ENST00000496659 PCOTHQ58A44 107 aa5.31□□□□□ -1.56
C4A-258ENST00000496659 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
C4A-258ENST00000496659 MUC2Q02817 5179 aa5.29□□□□□ -1.56
C4A-258ENST00000496659 MP68P56378 58 aa5.29□□□□□ -1.56
C4A-258ENST00000496659 TRAV7A0A075B6U4 112 aa5.28□□□□□ -1.56
C4A-258ENST00000496659 C5orf47Q569G3 176 aa5.28□□□□□ -1.56
C4A-258ENST00000496659 H0Y9P7 68 aa5.27□□□□□ -1.57
C4A-258ENST00000496659 LOC101927531A0A1B0GV80 90 aa5.26□□□□□ -1.57
C4A-258ENST00000496659 H3BPC8 53 aa5.26□□□□□ -1.57
C4A-258ENST00000496659 C7orf65Q6ZTY9 151 aa5.26□□□□□ -1.57
C4A-258ENST00000496659 Q5W150 140 aa5.25□□□□□ -1.57
C4A-258ENST00000496659 SERP2Q8N6R1 65 aa5.24□□□□□ -1.57
C4A-258ENST00000496659 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
C4A-258ENST00000496659 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
C4A-258ENST00000496659 SPINK7P58062 85 aa5.22□□□□□ -1.57
C4A-258ENST00000496659 ANAPC13Q9BS18 74 aa5.22□□□□□ -1.57
C4A-258ENST00000496659 C1orf64Q8NEQ6 169 aa5.21□□□□□ -1.58
C4A-258ENST00000496659 LINC00208Q96KT6 92 aa5.21□□□□□ -1.58
C4A-258ENST00000496659 COX7CP15954 63 aa5.19□□□□□ -1.58
C4A-258ENST00000496659 FAT4Q6V0I7 4981 aa5.19□□□□□ -1.58
C4A-258ENST00000496659 MUC17Q685J3 4493 aa5.19□□□□□ -1.58
C4A-258ENST00000496659 CYP4F30PQ9H0H9 118 aa5.16□□□□□ -1.58
C4A-258ENST00000496659 RBM12B-AS1Q9P1G2 102 aa5.16□□□□□ -1.58
C4A-258ENST00000496659 A0A0U1RQV1 116 aa5.15□□□□□ -1.59
C4A-258ENST00000496659 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
C4A-258ENST00000496659 KRTAP9-2Q9BYQ4 174 aa5.15□□□□□ -1.59
C4A-258ENST00000496659 HRES1P13985 223 aa5.13□□□□□ -1.59
C4A-258ENST00000496659 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
C4A-258ENST00000496659 KRTAP4-1Q9BYQ7 146 aa5.13□□□□□ -1.59
C4A-258ENST00000496659 FAM236DA0A1B0GTK5 79 aa5.12□□□□□ -1.59
C4A-258ENST00000496659 FAM236CP0DP71 79 aa5.12□□□□□ -1.59
C4A-258ENST00000496659 SNURFQ9Y675 71 aa5.11□□□□□ -1.59
C4A-258ENST00000496659 NDUFC1O43677 76 aa5.1□□□□□ -1.59
C4A-258ENST00000496659 COX6B2Q6YFQ2 88 aa5.09□□□□□ -1.59
C4A-258ENST00000496659 MPLKIPQ8TAP9 179 aa5.08□□□□□ -1.6
C4A-258ENST00000496659 C4orf26Q17RF5 130 aa5.07□□□□□ -1.6
C4A-258ENST00000496659 A8MUN3 132 aa5.05□□□□□ -1.6
C4A-258ENST00000496659 CCDC179H3BU77 68 aa5.05□□□□□ -1.6
C4A-258ENST00000496659 SPANXA2-OT1Q8N9U9 137 aa5.03□□□□□ -1.6
C4A-258ENST00000496659 KRTAP4-8Q9BYQ9 185 aa5.02□□□□□ -1.61
C4A-258ENST00000496659 H1FX-AS1Q4G0G2 97 aa5.01□□□□□ -1.61
C4A-258ENST00000496659 KRTAP9-6A0A140TA67 174 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms