RNA–Protein interactions for RNA: ENST00000496202.5

PRPF3-207, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 1 (best)

Gene PRPF3, Length 1,082 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-207ENST00000496202 IGKV4-1P06312 121 aa5.33□□□□□ -1.56
PRPF3-207ENST00000496202 LPAP08519 4548 aa5.33□□□□□ -1.56
PRPF3-207ENST00000496202 F8W1H4 67 aa5.32□□□□□ -1.56
PRPF3-207ENST00000496202 Q96NJ1 140 aa5.32□□□□□ -1.56
PRPF3-207ENST00000496202 XP32Q5T750 250 aa5.31□□□□□ -1.56
PRPF3-207ENST00000496202 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
PRPF3-207ENST00000496202 J3KT08 172 aa5.3□□□□□ -1.56
PRPF3-207ENST00000496202 DEFB116Q30KQ4 102 aa5.3□□□□□ -1.56
PRPF3-207ENST00000496202 LINC00472Q9H8W2 130 aa5.3□□□□□ -1.56
PRPF3-207ENST00000496202 NREPQ16612 68 aa5.29□□□□□ -1.56
PRPF3-207ENST00000496202 A0A1B0GV90 55 aa5.27□□□□□ -1.57
PRPF3-207ENST00000496202 ETDBQ3ZM63 59 aa5.27□□□□□ -1.57
PRPF3-207ENST00000496202 IGHV6-1A0A0B4J1U7 121 aa5.26□□□□□ -1.57
PRPF3-207ENST00000496202 NDUFB1O75438 58 aa5.26□□□□□ -1.57
PRPF3-207ENST00000496202 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
PRPF3-207ENST00000496202 DSCR10P59022 87 aa5.25□□□□□ -1.57
PRPF3-207ENST00000496202 SEC61GP60059 68 aa5.25□□□□□ -1.57
PRPF3-207ENST00000496202 LINC00313P59037 77 aa5.24□□□□□ -1.57
PRPF3-207ENST00000496202 C8orf87E5RJ46 101 aa5.23□□□□□ -1.57
PRPF3-207ENST00000496202 RPL37P61927 97 aaKnown RBP5.23□□□□□ -1.57
PRPF3-207ENST00000496202 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
PRPF3-207ENST00000496202 UBL5Q9BZL1 73 aa5.23□□□□□ -1.57
PRPF3-207ENST00000496202 A8MWP4 228 aa5.22□□□□□ -1.57
PRPF3-207ENST00000496202 Q6ZVQ6 151 aa5.22□□□□□ -1.57
PRPF3-207ENST00000496202 BPY2O14599 106 aa5.21□□□□□ -1.58
PRPF3-207ENST00000496202 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
PRPF3-207ENST00000496202 MPLKIPQ8TAP9 179 aa5.2□□□□□ -1.58
PRPF3-207ENST00000496202 LINC00846Q9NV44 126 aa5.2□□□□□ -1.58
PRPF3-207ENST00000496202 IGKV3D-7A0A0C4DH55 119 aa5.19□□□□□ -1.58
PRPF3-207ENST00000496202 ATP11AUNQ6ZP68 121 aa5.19□□□□□ -1.58
PRPF3-207ENST00000496202 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
PRPF3-207ENST00000496202 NOTCH2NLQ7Z3S9 236 aa5.18□□□□□ -1.58
PRPF3-207ENST00000496202 PRR15Q8IV56 129 aa5.18□□□□□ -1.58
PRPF3-207ENST00000496202 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
PRPF3-207ENST00000496202 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
PRPF3-207ENST00000496202 A0A0U1RQV1 116 aa5.17□□□□□ -1.58
PRPF3-207ENST00000496202 A8MUU9 505 aa5.17□□□□□ -1.58
PRPF3-207ENST00000496202 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
PRPF3-207ENST00000496202 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.16□□□□□ -1.58
PRPF3-207ENST00000496202 MUC17Q685J3 4493 aa5.15□□□□□ -1.58
PRPF3-207ENST00000496202 K7EQZ3 153 aa5.15□□□□□ -1.59
PRPF3-207ENST00000496202 ACYP1P07311 99 aa5.15□□□□□ -1.59
PRPF3-207ENST00000496202 FAM240AA0A1B0GVK7 77 aa5.14□□□□□ -1.59
PRPF3-207ENST00000496202 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
PRPF3-207ENST00000496202 Q8N9L7 120 aa5.13□□□□□ -1.59
PRPF3-207ENST00000496202 MMP24-AS1A0A0U1RRL7 71 aa5.12□□□□□ -1.59
PRPF3-207ENST00000496202 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
PRPF3-207ENST00000496202 hDV103S1A0JD37 113 aa5.11□□□□□ -1.59
PRPF3-207ENST00000496202 TMEM254Q8TBM7 123 aa5.11□□□□□ -1.59
PRPF3-207ENST00000496202 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
PRPF3-207ENST00000496202 J3QR89 54 aa5.1□□□□□ -1.59
PRPF3-207ENST00000496202 CXCL6P80162 114 aa5.1□□□□□ -1.59
PRPF3-207ENST00000496202 MRPL34Q9BQ48 92 aaKnown RBP5.1□□□□□ -1.59
PRPF3-207ENST00000496202 NDUFS5O43920 106 aa5.09□□□□□ -1.59
PRPF3-207ENST00000496202 CASC2Q6XLA1 102 aa5.09□□□□□ -1.59
PRPF3-207ENST00000496202 WFDC13Q8IUB5 93 aa5.09□□□□□ -1.59
PRPF3-207ENST00000496202 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
PRPF3-207ENST00000496202 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
PRPF3-207ENST00000496202 ZCCHC13Q8WW36 166 aaKnown RBP5.08□□□□□ -1.6
PRPF3-207ENST00000496202 HCG22E2RYF7 251 aa5.07□□□□□ -1.6
PRPF3-207ENST00000496202 MUC2Q02817 5179 aa5.07□□□□□ -1.6
PRPF3-207ENST00000496202 LINC00643Q86TS7 51 aa5.04□□□□□ -1.6
PRPF3-207ENST00000496202 COX6B2Q6YFQ2 88 aa5.03□□□□□ -1.6
PRPF3-207ENST00000496202 HIST1H4AP62805 103 aaKnown RBP5.02□□□□□ -1.61
PRPF3-207ENST00000496202 K7ERU9 68 aa4.99□□□□□ -1.61
PRPF3-207ENST00000496202 KRTAP19-4Q3LI73 84 aa4.99□□□□□ -1.61
PRPF3-207ENST00000496202 SPINK7P58062 85 aa4.98□□□□□ -1.61
PRPF3-207ENST00000496202 FAM236DA0A1B0GTK5 79 aa4.96□□□□□ -1.62
PRPF3-207ENST00000496202 FAM236CP0DP71 79 aa4.96□□□□□ -1.62
PRPF3-207ENST00000496202 LCE3BQ5TA77 95 aa4.96□□□□□ -1.62
PRPF3-207ENST00000496202 TP53AIP1Q9HCN2 124 aa4.96□□□□□ -1.62
PRPF3-207ENST00000496202 RBM12B-AS1Q9P1G2 102 aa4.96□□□□□ -1.62
PRPF3-207ENST00000496202 FAT4Q6V0I7 4981 aa4.96□□□□□ -1.62
PRPF3-207ENST00000496202 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
PRPF3-207ENST00000496202 IGKV2-30P06310 120 aa4.95□□□□□ -1.62
PRPF3-207ENST00000496202 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
PRPF3-207ENST00000496202 A0A087WVE0 104 aa4.94□□□□□ -1.62
PRPF3-207ENST00000496202 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
PRPF3-207ENST00000496202 Q5W150 140 aa4.94□□□□□ -1.62
PRPF3-207ENST00000496202 C7orf65Q6ZTY9 151 aa4.94□□□□□ -1.62
PRPF3-207ENST00000496202 HRES1P13985 223 aa4.93□□□□□ -1.62
PRPF3-207ENST00000496202 TRAV22A0A0B4J277 110 aa4.89□□□□□ -1.63
PRPF3-207ENST00000496202 M0R2T5 61 aa4.89□□□□□ -1.63
PRPF3-207ENST00000496202 KRTAP9-9Q9BYP9 154 aa4.89□□□□□ -1.63
PRPF3-207ENST00000496202 KRTAP9-4Q9BYQ2 154 aa4.89□□□□□ -1.63
PRPF3-207ENST00000496202 FLGP20930 4061 aaPredicted RBP4.89□□□□□ -1.63
PRPF3-207ENST00000496202 UQCRQO14949 82 aa4.88□□□□□ -1.63
PRPF3-207ENST00000496202 MT1HP80294 61 aa4.88□□□□□ -1.63
PRPF3-207ENST00000496202 MT-ATP8P03928 68 aa4.86□□□□□ -1.63
PRPF3-207ENST00000496202 SCGB1A1P11684 91 aa4.86□□□□□ -1.63
PRPF3-207ENST00000496202 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
PRPF3-207ENST00000496202 IMUPQ9GZP8 106 aa4.86□□□□□ -1.63
PRPF3-207ENST00000496202 H0Y9P7 68 aa4.85□□□□□ -1.63
PRPF3-207ENST00000496202 ATOX1O00244 68 aa4.85□□□□□ -1.63
PRPF3-207ENST00000496202 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
PRPF3-207ENST00000496202 LOC101927531A0A1B0GV80 90 aa4.83□□□□□ -1.64
PRPF3-207ENST00000496202 MP68P56378 58 aa4.81□□□□□ -1.64
PRPF3-207ENST00000496202 C4orf26Q17RF5 130 aa4.81□□□□□ -1.64
PRPF3-207ENST00000496202 KRTAP19-1Q8IUB9 90 aa4.81□□□□□ -1.64
PRPF3-207ENST00000496202 OCR1Q9BZK8 76 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms