RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 WFDC13Q8IUB5 93 aa9.39□□□□□ -0.91
HLA-A-208ENST00000496081 TRAV7A0A075B6U4 112 aa9.38□□□□□ -0.91
HLA-A-208ENST00000496081 A0A1B0GVX0 72 aa9.38□□□□□ -0.91
HLA-A-208ENST00000496081 C1orf195Q5TG92 126 aa9.38□□□□□ -0.91
HLA-A-208ENST00000496081 KRTAP29-1A8MX34 341 aaPredicted RBP9.37□□□□□ -0.91
HLA-A-208ENST00000496081 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
HLA-A-208ENST00000496081 IGHV6-1A0A0B4J1U7 121 aa9.36□□□□□ -0.91
HLA-A-208ENST00000496081 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
HLA-A-208ENST00000496081 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
HLA-A-208ENST00000496081 OCR1Q9BZK8 76 aa9.35□□□□□ -0.91
HLA-A-208ENST00000496081 RPS29P62273 56 aaKnown RBP9.34□□□□□ -0.91
HLA-A-208ENST00000496081 C8orf17Q9NRJ1 99 aa9.33□□□□□ -0.92
HLA-A-208ENST00000496081 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
HLA-A-208ENST00000496081 hDV103S1A0JD37 113 aa9.3□□□□□ -0.92
HLA-A-208ENST00000496081 LRP1Q07954 4544 aaKnown RBP9.28□□□□□ -0.92
HLA-A-208ENST00000496081 KRTAP10-8P60410 259 aa9.27□□□□□ -0.93
HLA-A-208ENST00000496081 ABCA13Q86UQ4 5058 aa9.26□□□□□ -0.93
HLA-A-208ENST00000496081 C20orf197Q8N268 126 aa9.24□□□□□ -0.93
HLA-A-208ENST00000496081 C8orf87E5RJ46 101 aa9.23□□□□□ -0.93
HLA-A-208ENST00000496081 TMEM254Q8TBM7 123 aa9.22□□□□□ -0.93
HLA-A-208ENST00000496081 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
HLA-A-208ENST00000496081 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
HLA-A-208ENST00000496081 TNXBP22105 4242 aa9.21□□□□□ -0.93
HLA-A-208ENST00000496081 LINC00313P59037 77 aa9.21□□□□□ -0.94
HLA-A-208ENST00000496081 CYSTM1Q9H1C7 97 aa9.21□□□□□ -0.94
HLA-A-208ENST00000496081 FAT3Q8TDW7 4589 aa9.2□□□□□ -0.94
HLA-A-208ENST00000496081 TMEM258P61165 79 aa9.19□□□□□ -0.94
HLA-A-208ENST00000496081 KLKP1Q107X0 134 aa9.19□□□□□ -0.94
HLA-A-208ENST00000496081 SNURFQ9Y675 71 aa9.18□□□□□ -0.94
HLA-A-208ENST00000496081 C5orf47Q569G3 176 aa9.17□□□□□ -0.94
HLA-A-208ENST00000496081 NDUFC1O43677 76 aa9.15□□□□□ -0.94
HLA-A-208ENST00000496081 NDUFS5O43920 106 aa9.15□□□□□ -0.94
HLA-A-208ENST00000496081 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
HLA-A-208ENST00000496081 TP53AIP1Q9HCN2 124 aa9.14□□□□□ -0.95
HLA-A-208ENST00000496081 MYCBP2O75592 4640 aa9.14□□□□□ -0.95
HLA-A-208ENST00000496081 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
HLA-A-208ENST00000496081 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
HLA-A-208ENST00000496081 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
HLA-A-208ENST00000496081 PCLOQ9Y6V0 5065 aa9.1□□□□□ -0.95
HLA-A-208ENST00000496081 H0Y9P7 68 aa9.09□□□□□ -0.95
HLA-A-208ENST00000496081 Q8N9P0 234 aaPredicted RBP9.09□□□□□ -0.95
HLA-A-208ENST00000496081 TRAV22A0A0B4J277 110 aa9.09□□□□□ -0.95
HLA-A-208ENST00000496081 H7BZZ5 65 aa9.09□□□□□ -0.95
HLA-A-208ENST00000496081 MP68P56378 58 aa9.09□□□□□ -0.95
HLA-A-208ENST00000496081 RPS28P62857 69 aaKnown RBP9.08□□□□□ -0.96
HLA-A-208ENST00000496081 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
HLA-A-208ENST00000496081 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
HLA-A-208ENST00000496081 OXTP01178 125 aa9.06□□□□□ -0.96
HLA-A-208ENST00000496081 LINC00208Q96KT6 92 aa9.06□□□□□ -0.96
HLA-A-208ENST00000496081 H3BPC8 53 aa9.04□□□□□ -0.96
HLA-A-208ENST00000496081 Q5W150 140 aa9.03□□□□□ -0.96
HLA-A-208ENST00000496081 FAM236DA0A1B0GTK5 79 aa9.02□□□□□ -0.97
HLA-A-208ENST00000496081 FAM236CP0DP71 79 aa9.02□□□□□ -0.97
HLA-A-208ENST00000496081 C9orf92A6NGG3 77 aa9.01□□□□□ -0.97
HLA-A-208ENST00000496081 ATP5EP56381 51 aaPredicted RBP9.01□□□□□ -0.97
HLA-A-208ENST00000496081 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
HLA-A-208ENST00000496081 C1orf64Q8NEQ6 169 aa9.01□□□□□ -0.97
HLA-A-208ENST00000496081 J3QL48 77 aa8.99□□□□□ -0.97
HLA-A-208ENST00000496081 FP248Q71RG6 208 aaPredicted RBP8.97□□□□□ -0.97
HLA-A-208ENST00000496081 SERP1Q9Y6X1 66 aa8.93□□□□□ -0.98
HLA-A-208ENST00000496081 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
HLA-A-208ENST00000496081 IGLV7-46A0A075B6I9 117 aa8.91□□□□□ -0.98
HLA-A-208ENST00000496081 A8MUU9 505 aa8.91□□□□□ -0.98
HLA-A-208ENST00000496081 LOC101927531A0A1B0GV80 90 aa8.9□□□□□ -0.98
HLA-A-208ENST00000496081 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
HLA-A-208ENST00000496081 CYP4F30PQ9H0H9 118 aa8.86□□□□□ -0.99
HLA-A-208ENST00000496081 PRR4Q16378 134 aa8.84□□□□□ -0.99
HLA-A-208ENST00000496081 IGKV2-30P06310 120 aa8.84□□□□□ -1
HLA-A-208ENST00000496081 Q75L30 129 aa8.83□□□□□ -1
HLA-A-208ENST00000496081 SPANXA2-OT1Q8N9U9 137 aa8.81□□□□□ -1
HLA-A-208ENST00000496081 XP32Q5T750 250 aa8.78□□□□□ -1
HLA-A-208ENST00000496081 IGKV2D-30A0A075B6S6 120 aa8.78□□□□□ -1
HLA-A-208ENST00000496081 HERC1Q15751 4861 aa8.78□□□□□ -1
HLA-A-208ENST00000496081 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
HLA-A-208ENST00000496081 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
HLA-A-208ENST00000496081 TPRXLQ17RH7 258 aa8.73□□□□□ -1.01
HLA-A-208ENST00000496081 HRES1P13985 223 aa8.72□□□□□ -1.01
HLA-A-208ENST00000496081 C7orf65Q6ZTY9 151 aa8.72□□□□□ -1.01
HLA-A-208ENST00000496081 ATP11AUNQ6ZP68 121 aa8.7□□□□□ -1.02
HLA-A-208ENST00000496081 SPINK7P58062 85 aa8.65□□□□□ -1.02
HLA-A-208ENST00000496081 LPAP08519 4548 aa8.62□□□□□ -1.03
HLA-A-208ENST00000496081 LRP2P98164 4655 aa8.59□□□□□ -1.03
HLA-A-208ENST00000496081 DMAC1Q96GE9 116 aa8.58□□□□□ -1.04
HLA-A-208ENST00000496081 HMCN2Q8NDA2 5059 aa8.57□□□□□ -1.04
HLA-A-208ENST00000496081 C4orf26Q17RF5 130 aa8.56□□□□□ -1.04
HLA-A-208ENST00000496081 COA5Q86WW8 74 aa8.56□□□□□ -1.04
HLA-A-208ENST00000496081 ACYP2P14621 99 aa8.53□□□□□ -1.04
HLA-A-208ENST00000496081 Q1T7F1 81 aa8.5□□□□□ -1.05
HLA-A-208ENST00000496081 V9GYY9 64 aa8.48□□□□□ -1.05
HLA-A-208ENST00000496081 MPLKIPQ8TAP9 179 aa8.48□□□□□ -1.05
HLA-A-208ENST00000496081 KRTAP3-1Q9BYR8 98 aa8.46□□□□□ -1.05
HLA-A-208ENST00000496081 A8MUN3 132 aa8.45□□□□□ -1.06
HLA-A-208ENST00000496081 COX6B2Q6YFQ2 88 aa8.43□□□□□ -1.06
HLA-A-208ENST00000496081 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
HLA-A-208ENST00000496081 CHKB-CPT1BH3BT56 60 aa8.4□□□□□ -1.07
HLA-A-208ENST00000496081 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
HLA-A-208ENST00000496081 MUC17Q685J3 4493 aa8.28□□□□□ -1.08
HLA-A-208ENST00000496081 LINC01558Q9Y6Z2 57 aa8.27□□□□□ -1.08
HLA-A-208ENST00000496081 PSPHP1O15172 72 aa8.27□□□□□ -1.09
HLA-A-208ENST00000496081 UBR4Q5T4S7 5183 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 256.2 ms