RNA–Protein interactions for RNA: ENST00000495221.1

PDE1C-211, Transcript of phosphodiesterase 1C, humanhuman

TSL 4

Gene PDE1C, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-211ENST00000495221 RBM3P98179 157 aaKnown RBP11.06□□□□□ -0.64
PDE1C-211ENST00000495221 KRTAP16-1A8MUX0 517 aa11.04□□□□□ -0.64
PDE1C-211ENST00000495221 DSCR8Q96T75 97 aa11.04□□□□□ -0.64
PDE1C-211ENST00000495221 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
PDE1C-211ENST00000495221 H3BT86 120 aa11.03□□□□□ -0.64
PDE1C-211ENST00000495221 CCKP06307 115 aa11.03□□□□□ -0.64
PDE1C-211ENST00000495221 LINC00472Q9H8W2 130 aa11.02□□□□□ -0.65
PDE1C-211ENST00000495221 K7EP34 96 aa11.01□□□□□ -0.65
PDE1C-211ENST00000495221 GTF2H5Q6ZYL4 71 aa11.01□□□□□ -0.65
PDE1C-211ENST00000495221 MTURNQ8N3F0 131 aa10.98□□□□□ -0.65
PDE1C-211ENST00000495221 DEFB116Q30KQ4 102 aa10.95□□□□□ -0.66
PDE1C-211ENST00000495221 NOTCH2NLQ7Z3S9 236 aa10.95□□□□□ -0.66
PDE1C-211ENST00000495221 PDE6GP18545 87 aa10.94□□□□□ -0.66
PDE1C-211ENST00000495221 VPS25Q9BRG1 176 aa10.94□□□□□ -0.66
PDE1C-211ENST00000495221 IGHV6-1A0A0B4J1U7 121 aa10.92□□□□□ -0.66
PDE1C-211ENST00000495221 KRTAP9-8Q9BYQ0 159 aa10.92□□□□□ -0.66
PDE1C-211ENST00000495221 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
PDE1C-211ENST00000495221 LOC110117498A0A087WWA1 95 aa10.9□□□□□ -0.66
PDE1C-211ENST00000495221 C21orf62-AS1Q17RA5 79 aa10.9□□□□□ -0.66
PDE1C-211ENST00000495221 FAM236DA0A1B0GTK5 79 aa10.89□□□□□ -0.67
PDE1C-211ENST00000495221 FAM236CP0DP71 79 aa10.89□□□□□ -0.67
PDE1C-211ENST00000495221 MPLKIPQ8TAP9 179 aa10.89□□□□□ -0.67
PDE1C-211ENST00000495221 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
PDE1C-211ENST00000495221 A0A1B0GVX0 72 aa10.88□□□□□ -0.67
PDE1C-211ENST00000495221 RBM12B-AS1Q9P1G2 102 aa10.88□□□□□ -0.67
PDE1C-211ENST00000495221 HRES1P13985 223 aa10.87□□□□□ -0.67
PDE1C-211ENST00000495221 Q6ZQT0 140 aa10.87□□□□□ -0.67
PDE1C-211ENST00000495221 PRO0461Q9UI25 63 aa10.86□□□□□ -0.67
PDE1C-211ENST00000495221 F8W1H4 67 aa10.85□□□□□ -0.67
PDE1C-211ENST00000495221 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
PDE1C-211ENST00000495221 J3KT08 172 aa10.84□□□□□ -0.67
PDE1C-211ENST00000495221 A0A1B0GW54 56 aa10.83□□□□□ -0.68
PDE1C-211ENST00000495221 KRTAP9-7A8MTY7 169 aa10.76□□□□□ -0.69
PDE1C-211ENST00000495221 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.76□□□□□ -0.69
PDE1C-211ENST00000495221 ZCCHC13Q8WW36 166 aaKnown RBP10.76□□□□□ -0.69
PDE1C-211ENST00000495221 A0A1B0GV90 55 aa10.74□□□□□ -0.69
PDE1C-211ENST00000495221 MT2AP02795 61 aa10.74□□□□□ -0.69
PDE1C-211ENST00000495221 NDUFB1O75438 58 aa10.73□□□□□ -0.69
PDE1C-211ENST00000495221 Q8N9P0 234 aaPredicted RBP10.71□□□□□ -0.69
PDE1C-211ENST00000495221 ETDBQ3ZM63 59 aa10.7□□□□□ -0.7
PDE1C-211ENST00000495221 NREPQ16612 68 aa10.69□□□□□ -0.7
PDE1C-211ENST00000495221 USH2AO75445 5202 aa10.68□□□□□ -0.7
PDE1C-211ENST00000495221 SSPOA2VEC9 5147 aa10.68□□□□□ -0.7
PDE1C-211ENST00000495221 A8MWP4 228 aa10.67□□□□□ -0.7
PDE1C-211ENST00000495221 SPINK7P58062 85 aa10.67□□□□□ -0.7
PDE1C-211ENST00000495221 MT1FP04733 61 aa10.65□□□□□ -0.7
PDE1C-211ENST00000495221 C8orf17Q9NRJ1 99 aa10.65□□□□□ -0.7
PDE1C-211ENST00000495221 IGKV3D-7A0A0C4DH55 119 aa10.6□□□□□ -0.71
PDE1C-211ENST00000495221 KRTAP10-10P60014 251 aa10.59□□□□□ -0.71
PDE1C-211ENST00000495221 KRTAP9-3Q9BYQ3 159 aa10.58□□□□□ -0.72
PDE1C-211ENST00000495221 Q6ZVQ6 151 aa10.57□□□□□ -0.72
PDE1C-211ENST00000495221 UBL5Q9BZL1 73 aa10.57□□□□□ -0.72
PDE1C-211ENST00000495221 LCE2BO14633 110 aa10.55□□□□□ -0.72
PDE1C-211ENST00000495221 PRR15Q8IV56 129 aa10.55□□□□□ -0.72
PDE1C-211ENST00000495221 WFDC13Q8IUB5 93 aa10.54□□□□□ -0.72
PDE1C-211ENST00000495221 BPY2O14599 106 aa10.53□□□□□ -0.72
PDE1C-211ENST00000495221 LINC00846Q9NV44 126 aa10.53□□□□□ -0.72
PDE1C-211ENST00000495221 FCGBPQ9Y6R7 5405 aaPredicted RBP10.51□□□□□ -0.73
PDE1C-211ENST00000495221 TMEM254Q8TBM7 123 aa10.5□□□□□ -0.73
PDE1C-211ENST00000495221 ACYP1P07311 99 aa10.49□□□□□ -0.73
PDE1C-211ENST00000495221 MMP24-AS1A0A0U1RRL7 71 aa10.48□□□□□ -0.73
PDE1C-211ENST00000495221 MRPL34Q9BQ48 92 aaKnown RBP10.48□□□□□ -0.73
PDE1C-211ENST00000495221 KRTAP19-1Q8IUB9 90 aa10.44□□□□□ -0.74
PDE1C-211ENST00000495221 FAM240AA0A1B0GVK7 77 aa10.43□□□□□ -0.74
PDE1C-211ENST00000495221 hDV103S1A0JD37 113 aa10.41□□□□□ -0.74
PDE1C-211ENST00000495221 K7EQZ3 153 aa10.4□□□□□ -0.74
PDE1C-211ENST00000495221 J3QR89 54 aa10.39□□□□□ -0.75
PDE1C-211ENST00000495221 NDUFS5O43920 106 aa10.35□□□□□ -0.75
PDE1C-211ENST00000495221 CXCL6P80162 114 aa10.35□□□□□ -0.75
PDE1C-211ENST00000495221 H1FX-AS1Q4G0G2 97 aa10.33□□□□□ -0.76
PDE1C-211ENST00000495221 Q8N9L7 120 aa10.33□□□□□ -0.76
PDE1C-211ENST00000495221 ATP5EP2Q5VTU8 51 aa10.28□□□□□ -0.76
PDE1C-211ENST00000495221 C7orf65Q6ZTY9 151 aa10.28□□□□□ -0.76
PDE1C-211ENST00000495221 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
PDE1C-211ENST00000495221 IGKV2-30P06310 120 aa10.25□□□□□ -0.77
PDE1C-211ENST00000495221 KRTAP19-6Q3LI70 58 aa10.25□□□□□ -0.77
PDE1C-211ENST00000495221 CASC2Q6XLA1 102 aa10.25□□□□□ -0.77
PDE1C-211ENST00000495221 LINC00643Q86TS7 51 aa10.25□□□□□ -0.77
PDE1C-211ENST00000495221 MACF1Q9UPN3 7388 aaKnown RBP10.24□□□□□ -0.77
PDE1C-211ENST00000495221 SYNE2Q8WXH0 6885 aaKnown RBP10.24□□□□□ -0.77
PDE1C-211ENST00000495221 Q5W150 140 aa10.23□□□□□ -0.77
PDE1C-211ENST00000495221 HCG22E2RYF7 251 aa10.22□□□□□ -0.77
PDE1C-211ENST00000495221 K7ERU9 68 aa10.19□□□□□ -0.78
PDE1C-211ENST00000495221 HIST1H4AP62805 103 aaKnown RBP10.16□□□□□ -0.78
PDE1C-211ENST00000495221 C4orf26Q17RF5 130 aa10.08□□□□□ -0.8
PDE1C-211ENST00000495221 TP53AIP1Q9HCN2 124 aa10.04□□□□□ -0.8
PDE1C-211ENST00000495221 A0A087WVE0 104 aa10□□□□□ -0.81
PDE1C-211ENST00000495221 C5orf47Q569G3 176 aa9.94□□□□□ -0.82
PDE1C-211ENST00000495221 KRTAP3-1Q9BYR8 98 aa9.93□□□□□ -0.82
PDE1C-211ENST00000495221 KRTAP6-3Q3LI67 103 aa9.92□□□□□ -0.82
PDE1C-211ENST00000495221 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
PDE1C-211ENST00000495221 S4R3F8 94 aa9.92□□□□□ -0.82
PDE1C-211ENST00000495221 C1orf64Q8NEQ6 169 aa9.9□□□□□ -0.82
PDE1C-211ENST00000495221 FAM236AA0A1B0GUQ0 79 aa9.89□□□□□ -0.83
PDE1C-211ENST00000495221 FAM236BA0A1B0GV22 79 aa9.89□□□□□ -0.83
PDE1C-211ENST00000495221 MT-ATP8P03928 68 aa9.89□□□□□ -0.83
PDE1C-211ENST00000495221 UQCRQO14949 82 aa9.88□□□□□ -0.83
PDE1C-211ENST00000495221 CSAG1Q6PB30 78 aa9.87□□□□□ -0.83
PDE1C-211ENST00000495221 SCGB1A1P11684 91 aa9.85□□□□□ -0.83
PDE1C-211ENST00000495221 TRAV22A0A0B4J277 110 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms