RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 Q96NJ1 140 aa6.17□□□□□ -1.42
SAMM50-206ENST00000494795 SPTSSBQ8NFR3 76 aa6.17□□□□□ -1.42
SAMM50-206ENST00000494795 A0A1B0GW54 56 aa6.16□□□□□ -1.42
SAMM50-206ENST00000494795 PSPHP1O15172 72 aa6.16□□□□□ -1.42
SAMM50-206ENST00000494795 A0A087X002 238 aa6.16□□□□□ -1.42
SAMM50-206ENST00000494795 FAM229BQ4G0N7 80 aa6.15□□□□□ -1.42
SAMM50-206ENST00000494795 Q6ZSA8 131 aa6.15□□□□□ -1.42
SAMM50-206ENST00000494795 HCG22E2RYF7 251 aa6.14□□□□□ -1.43
SAMM50-206ENST00000494795 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
SAMM50-206ENST00000494795 RYR3Q15413 4870 aa6.13□□□□□ -1.43
SAMM50-206ENST00000494795 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
SAMM50-206ENST00000494795 APOBP04114 4563 aaKnown RBP6.13□□□□□ -1.43
SAMM50-206ENST00000494795 ATP5EP56381 51 aaPredicted RBP6.12□□□□□ -1.43
SAMM50-206ENST00000494795 NDUFC1O43677 76 aa6.12□□□□□ -1.43
SAMM50-206ENST00000494795 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
SAMM50-206ENST00000494795 SMR3BP02814 79 aaPredicted RBP6.11□□□□□ -1.43
SAMM50-206ENST00000494795 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
SAMM50-206ENST00000494795 KRTAP13-2Q52LG2 175 aa6.1□□□□□ -1.43
SAMM50-206ENST00000494795 SPINK6Q6UWN8 80 aa6.1□□□□□ -1.43
SAMM50-206ENST00000494795 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
SAMM50-206ENST00000494795 A8MWP4 228 aa6.1□□□□□ -1.43
SAMM50-206ENST00000494795 ZNF706Q9Y5V0 76 aaPredicted RBP6.09□□□□□ -1.43
SAMM50-206ENST00000494795 MMP24-AS1A0A0U1RRL7 71 aa6.07□□□□□ -1.44
SAMM50-206ENST00000494795 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
SAMM50-206ENST00000494795 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
SAMM50-206ENST00000494795 KRTAP1-4P0C5Y4 121 aa6.06□□□□□ -1.44
SAMM50-206ENST00000494795 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
SAMM50-206ENST00000494795 PRR4Q16378 134 aa6.04□□□□□ -1.44
SAMM50-206ENST00000494795 LCE6AA0A183 80 aa6.04□□□□□ -1.44
SAMM50-206ENST00000494795 Q75L30 129 aa6.03□□□□□ -1.44
SAMM50-206ENST00000494795 A0A1B0GVY2 172 aa6.01□□□□□ -1.45
SAMM50-206ENST00000494795 hDV103S1A0JD37 113 aa6.01□□□□□ -1.45
SAMM50-206ENST00000494795 NDUFS5O43920 106 aa6.01□□□□□ -1.45
SAMM50-206ENST00000494795 ZCCHC13Q8WW36 166 aaKnown RBP6.01□□□□□ -1.45
SAMM50-206ENST00000494795 LRP1Q07954 4544 aaKnown RBP6.01□□□□□ -1.45
SAMM50-206ENST00000494795 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
SAMM50-206ENST00000494795 C8orf17Q9NRJ1 99 aa6.01□□□□□ -1.45
SAMM50-206ENST00000494795 A8MU10 97 aa6□□□□□ -1.45
SAMM50-206ENST00000494795 LINC00208Q96KT6 92 aa6□□□□□ -1.45
SAMM50-206ENST00000494795 A0A1B0GVX0 72 aa5.99□□□□□ -1.45
SAMM50-206ENST00000494795 A8MUN3 132 aa5.99□□□□□ -1.45
SAMM50-206ENST00000494795 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
SAMM50-206ENST00000494795 NDUFB1O75438 58 aa5.98□□□□□ -1.45
SAMM50-206ENST00000494795 PKHD1L1Q86WI1 4243 aa5.98□□□□□ -1.45
SAMM50-206ENST00000494795 TRAV22A0A0B4J277 110 aa5.98□□□□□ -1.45
SAMM50-206ENST00000494795 H0Y9P7 68 aa5.97□□□□□ -1.45
SAMM50-206ENST00000494795 ASB16-AS1Q495Z4 193 aa5.97□□□□□ -1.45
SAMM50-206ENST00000494795 SSBP3-AS1Q7Z2R9 100 aa5.95□□□□□ -1.46
SAMM50-206ENST00000494795 HSPG2P98160 4391 aa5.95□□□□□ -1.46
SAMM50-206ENST00000494795 Q5W150 140 aa5.94□□□□□ -1.46
SAMM50-206ENST00000494795 KRTAP10-4P60372 401 aaPredicted RBP5.94□□□□□ -1.46
SAMM50-206ENST00000494795 Q1T7F1 81 aa5.94□□□□□ -1.46
SAMM50-206ENST00000494795 RETNLBQ9BQ08 111 aa5.94□□□□□ -1.46
SAMM50-206ENST00000494795 CDK2AP2O75956 126 aa5.93□□□□□ -1.46
SAMM50-206ENST00000494795 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
SAMM50-206ENST00000494795 A6NED7 52 aa5.93□□□□□ -1.46
SAMM50-206ENST00000494795 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
SAMM50-206ENST00000494795 EPPK1P58107 5090 aaKnown RBP5.92□□□□□ -1.46
SAMM50-206ENST00000494795 LCA10Q71F78 164 aa5.92□□□□□ -1.46
SAMM50-206ENST00000494795 C1orf64Q8NEQ6 169 aa5.92□□□□□ -1.46
SAMM50-206ENST00000494795 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
SAMM50-206ENST00000494795 PCOTHQ58A44 107 aa5.92□□□□□ -1.46
SAMM50-206ENST00000494795 TYMSOSQ8TAI1 123 aa5.91□□□□□ -1.46
SAMM50-206ENST00000494795 MRPL34Q9BQ48 92 aaKnown RBP5.91□□□□□ -1.46
SAMM50-206ENST00000494795 MP68P56378 58 aa5.91□□□□□ -1.46
SAMM50-206ENST00000494795 C7orf65Q6ZTY9 151 aa5.9□□□□□ -1.46
SAMM50-206ENST00000494795 SEC61BP60468 96 aaKnown RBP5.9□□□□□ -1.47
SAMM50-206ENST00000494795 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
SAMM50-206ENST00000494795 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
SAMM50-206ENST00000494795 MYCBP2O75592 4640 aa5.89□□□□□ -1.47
SAMM50-206ENST00000494795 FLG2Q5D862 2391 aaPredicted RBP5.87□□□□□ -1.47
SAMM50-206ENST00000494795 RYR1P21817 5038 aa5.85□□□□□ -1.47
SAMM50-206ENST00000494795 TNXBP22105 4242 aa5.85□□□□□ -1.47
SAMM50-206ENST00000494795 LINC00313P59037 77 aa5.84□□□□□ -1.47
SAMM50-206ENST00000494795 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
SAMM50-206ENST00000494795 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.48
SAMM50-206ENST00000494795 Q5VV11 94 aa5.84□□□□□ -1.48
SAMM50-206ENST00000494795 Q8N9P0 234 aaPredicted RBP5.82□□□□□ -1.48
SAMM50-206ENST00000494795 LINC00304Q8N9R0 145 aa5.82□□□□□ -1.48
SAMM50-206ENST00000494795 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
SAMM50-206ENST00000494795 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
SAMM50-206ENST00000494795 TP53AIP1Q9HCN2 124 aa5.81□□□□□ -1.48
SAMM50-206ENST00000494795 A6NN06 94 aa5.8□□□□□ -1.48
SAMM50-206ENST00000494795 LIMD2Q9BT23 127 aa5.79□□□□□ -1.48
SAMM50-206ENST00000494795 C9orf92A6NGG3 77 aa5.78□□□□□ -1.48
SAMM50-206ENST00000494795 SPINK1P00995 79 aa5.78□□□□□ -1.48
SAMM50-206ENST00000494795 FAT3Q8TDW7 4589 aa5.78□□□□□ -1.48
SAMM50-206ENST00000494795 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
SAMM50-206ENST00000494795 CYP4F30PQ9H0H9 118 aa5.78□□□□□ -1.48
SAMM50-206ENST00000494795 H3BPC8 53 aa5.76□□□□□ -1.49
SAMM50-206ENST00000494795 IGLV7-46A0A075B6I9 117 aa5.74□□□□□ -1.49
SAMM50-206ENST00000494795 Q8N1X5 172 aa5.74□□□□□ -1.49
SAMM50-206ENST00000494795 Q5VSD8 79 aa5.74□□□□□ -1.49
SAMM50-206ENST00000494795 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
SAMM50-206ENST00000494795 CDC42SE1Q9NRR8 79 aa5.72□□□□□ -1.49
SAMM50-206ENST00000494795 COA5Q86WW8 74 aa5.72□□□□□ -1.49
SAMM50-206ENST00000494795 IGKV2D-30A0A075B6S6 120 aa5.71□□□□□ -1.5
SAMM50-206ENST00000494795 IGKV2-30P06310 120 aa5.71□□□□□ -1.5
SAMM50-206ENST00000494795 HRES1P13985 223 aa5.7□□□□□ -1.5
SAMM50-206ENST00000494795 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms