RNA–Protein interactions for RNA: ENST00000494223.1

ALS2CR12-210, Transcript of amyotrophic lateral sclerosis 2 chromosome region 12, humanhuman

TSL 3

Gene ALS2CR12, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2CR12-210ENST00000494223 ZZEF1O43149 2961 aa0.39□□□□□ -2.35
ALS2CR12-210ENST00000494223 CSPG4Q6UVK1 2322 aa0.38□□□□□ -2.35
ALS2CR12-210ENST00000494223 ABCA2Q9BZC7 2435 aa0.38□□□□□ -2.35
ALS2CR12-210ENST00000494223 KMT2DO14686 5537 aa0.38□□□□□ -2.35
ALS2CR12-210ENST00000494223 PCNX1Q96RV3 2341 aa0.38□□□□□ -2.35
ALS2CR12-210ENST00000494223 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
ALS2CR12-210ENST00000494223 CHD6Q8TD26 2715 aa0.37□□□□□ -2.35
ALS2CR12-210ENST00000494223 TNRC18O15417 2968 aaPredicted RBP0.37□□□□□ -2.35
ALS2CR12-210ENST00000494223 APC2O95996 2303 aa0.37□□□□□ -2.35
ALS2CR12-210ENST00000494223 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.37□□□□□ -2.35
ALS2CR12-210ENST00000494223 COL6A5A8TX70 2615 aa0.36□□□□□ -2.35
ALS2CR12-210ENST00000494223 CNOT1A5YKK6 2376 aaKnown RBP0.36□□□□□ -2.35
ALS2CR12-210ENST00000494223 SPTBN4Q9H254 2564 aa0.36□□□□□ -2.35
ALS2CR12-210ENST00000494223 KALRNO60229 2985 aa0.36□□□□□ -2.35
ALS2CR12-210ENST00000494223 CHD7Q9P2D1 2997 aa0.36□□□□□ -2.35
ALS2CR12-210ENST00000494223 CEP350Q5VT06 3117 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 COL6A3P12111 3177 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 CELSR2Q9HCU4 2923 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 SPTA1P02549 2419 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 PRRC2CQ9Y520 2896 aaKnown RBP0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 IGF2RP11717 2491 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 PIEZO2Q9H5I5 2752 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 NBASA2RRP1 2371 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 SONP18583 2426 aaKnown RBP0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 CREBBPQ92793 2442 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 MGAQ8IWI9 3026 aa0.35□□□□□ -2.35
ALS2CR12-210ENST00000494223 NCOR1O75376 2440 aa0.34□□□□□ -2.35
ALS2CR12-210ENST00000494223 A0A0C4DFX4 3053 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 AKAP13Q12802 2813 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 NCOR2Q9Y618 2525 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 FAT4Q6V0I7 4981 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 C2CD3Q4AC94 2353 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 CMYA5Q8N3K9 4069 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 POLQO75417 2590 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 DNAH12Q6ZR08 3092 aa0.34□□□□□ -2.36
ALS2CR12-210ENST00000494223 CCDC168Q8NDH2 2452 aa0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 MAP1AP78559 2803 aaPredicted RBP0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 ANKHD1Q8IWZ3 2542 aaKnown RBP0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 FAM186AA6NE01 2351 aa0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 KRTAP8-1Q8IUC2 63 aa0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 FRYLO94915 3013 aa0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 DSPP15924 2871 aaKnown RBP0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 SPG11Q96JI7 2443 aa0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 WDFY4Q6ZS81 3184 aa0.33□□□□□ -2.36
ALS2CR12-210ENST00000494223 AKAP9Q99996 3911 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 PRUNE2Q8WUY3 3088 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 CFAP47Q6ZTR5 3102 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 LRBAP50851 2863 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 CFAP54Q96N23 3096 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 TRANK1O15050 2925 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 TENM4Q6N022 2769 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 FRYQ5TBA9 3013 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 DMXL2Q8TDJ6 3036 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 DMXL1Q9Y485 3027 aa0.32□□□□□ -2.36
ALS2CR12-210ENST00000494223 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 DOPEY1Q5JWR5 2465 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 RIF1Q5UIP0 2472 aaKnown RBP0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 LAMA2P24043 3122 aaKnown RBP0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 COL7A1Q02388 2944 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 PIEZO1Q92508 2521 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 CENPFP49454 3210 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 PRKDCP78527 4128 aaKnown RBP0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 TRIOO75962 3097 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 FAM208BQ5VWN6 2430 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 KRTAP19-5Q3LI72 72 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 VCANP13611 3396 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 NBEAQ8NFP9 2946 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 UTP20O75691 2785 aaKnown RBP0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 ITPR1Q14643 2758 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 TEX15Q9BXT5 2789 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 DCHS1Q96JQ0 3298 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 BOD1L1Q8NFC6 3051 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 ANKRD17O75179 2603 aaKnown RBP0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 HECTD1Q9ULT8 2610 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 C5orf42Q9H799 3197 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
ALS2CR12-210ENST00000494223 CENPEQ02224 2701 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 CELSR1Q9NYQ6 3014 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 TGP01266 2768 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 VPS13DQ5THJ4 4388 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 PCNTO95613 3336 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 TACC2O95359 2948 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 PRM1P04553 51 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 MT1HL1P0DM35 61 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 SPRR2GQ9BYE4 73 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 ZFHX4Q86UP3 3567 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 PTPN13Q12923 2485 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 SPTAN1Q13813 2472 aaKnown RBP0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 MYO9AB2RTY4 2548 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 ZFYVE26Q68DK2 2539 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 MKI67P46013 3256 aaKnown RBP0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 SETXQ7Z333 2677 aaKnown RBP0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 HECTD4Q9Y4D8 3996 aa0.3□□□□□ -2.36
ALS2CR12-210ENST00000494223 UBR5O95071 2799 aaPredicted RBP0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 PDZD2O15018 2839 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 VWFP04275 2813 aa0.29□□□□□ -2.36
ALS2CR12-210ENST00000494223 NBPF19A0A087WUL8 3843 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms