RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 Q1T7F1 81 aa6.87□□□□□ -1.31
COL25A1-204ENST00000494183 CELSR1Q9NYQ6 3014 aa6.86□□□□□ -1.31
COL25A1-204ENST00000494183 TENM2Q9NT68 2774 aa6.86□□□□□ -1.31
COL25A1-204ENST00000494183 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
COL25A1-204ENST00000494183 CAMK2N1Q7Z7J9 78 aa6.85□□□□□ -1.31
COL25A1-204ENST00000494183 KRTAP7-1Q8IUC3 87 aa6.83□□□□□ -1.32
COL25A1-204ENST00000494183 S4R3F8 94 aa6.81□□□□□ -1.32
COL25A1-204ENST00000494183 LINC01558Q9Y6Z2 57 aa6.8□□□□□ -1.32
COL25A1-204ENST00000494183 VWFP04275 2813 aa6.79□□□□□ -1.32
COL25A1-204ENST00000494183 KTN1-AS1Q86SY8 53 aa6.78□□□□□ -1.32
COL25A1-204ENST00000494183 NOTCH2NLQ7Z3S9 236 aa6.78□□□□□ -1.32
COL25A1-204ENST00000494183 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
COL25A1-204ENST00000494183 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
COL25A1-204ENST00000494183 Q75L30 129 aa6.76□□□□□ -1.33
COL25A1-204ENST00000494183 FBN1P35555 2871 aaKnown RBP6.75□□□□□ -1.33
COL25A1-204ENST00000494183 R4GN34 69 aa6.75□□□□□ -1.33
COL25A1-204ENST00000494183 KRTAP21-3Q3LHN1 58 aa6.75□□□□□ -1.33
COL25A1-204ENST00000494183 MUC3AQ02505 3323 aa6.73□□□□□ -1.33
COL25A1-204ENST00000494183 LCA10Q71F78 164 aa6.73□□□□□ -1.33
COL25A1-204ENST00000494183 WDFY3Q8IZQ1 3526 aa6.72□□□□□ -1.33
COL25A1-204ENST00000494183 DMAC1Q96GE9 116 aa6.72□□□□□ -1.33
COL25A1-204ENST00000494183 SRRM2Q9UQ35 2752 aaKnown RBP6.71□□□□□ -1.33
COL25A1-204ENST00000494183 PDZD2O15018 2839 aa6.71□□□□□ -1.34
COL25A1-204ENST00000494183 TGP01266 2768 aa6.71□□□□□ -1.34
COL25A1-204ENST00000494183 LAMA5O15230 3695 aa6.7□□□□□ -1.34
COL25A1-204ENST00000494183 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
COL25A1-204ENST00000494183 Q5XG85 94 aa6.69□□□□□ -1.34
COL25A1-204ENST00000494183 Q5VV11 94 aa6.68□□□□□ -1.34
COL25A1-204ENST00000494183 KRTAP13-1Q8IUC0 172 aa6.68□□□□□ -1.34
COL25A1-204ENST00000494183 OXTP01178 125 aa6.67□□□□□ -1.34
COL25A1-204ENST00000494183 ASPMQ8IZT6 3477 aa6.66□□□□□ -1.34
COL25A1-204ENST00000494183 ASB16-AS1Q495Z4 193 aa6.65□□□□□ -1.34
COL25A1-204ENST00000494183 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
COL25A1-204ENST00000494183 M0QZ58 72 aa6.61□□□□□ -1.35
COL25A1-204ENST00000494183 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
COL25A1-204ENST00000494183 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
COL25A1-204ENST00000494183 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
COL25A1-204ENST00000494183 LUZP6Q538Z0 58 aa6.56□□□□□ -1.36
COL25A1-204ENST00000494183 ADM2Q7Z4H4 148 aa6.54□□□□□ -1.36
COL25A1-204ENST00000494183 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
COL25A1-204ENST00000494183 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
COL25A1-204ENST00000494183 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
COL25A1-204ENST00000494183 ZFHX4Q86UP3 3567 aa6.51□□□□□ -1.37
COL25A1-204ENST00000494183 DMDP11532 3685 aa6.44□□□□□ -1.38
COL25A1-204ENST00000494183 KRTAP1-4P0C5Y4 121 aa6.42□□□□□ -1.38
COL25A1-204ENST00000494183 ROMO1P60602 79 aa6.42□□□□□ -1.38
COL25A1-204ENST00000494183 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
COL25A1-204ENST00000494183 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.38
COL25A1-204ENST00000494183 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.39
COL25A1-204ENST00000494183 A8MUU9 505 aa6.39□□□□□ -1.39
COL25A1-204ENST00000494183 A8MU10 97 aa6.36□□□□□ -1.39
COL25A1-204ENST00000494183 SMG1Q96Q15 3661 aaKnown RBP6.36□□□□□ -1.39
COL25A1-204ENST00000494183 CUBNO60494 3623 aa6.34□□□□□ -1.39
COL25A1-204ENST00000494183 CSMD1Q96PZ7 3565 aa6.3□□□□□ -1.4
COL25A1-204ENST00000494183 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
COL25A1-204ENST00000494183 XP32Q5T750 250 aa6.29□□□□□ -1.4
COL25A1-204ENST00000494183 FBN3Q75N90 2809 aa6.28□□□□□ -1.4
COL25A1-204ENST00000494183 COL7A1Q02388 2944 aa6.25□□□□□ -1.41
COL25A1-204ENST00000494183 SVEP1Q4LDE5 3571 aa6.22□□□□□ -1.41
COL25A1-204ENST00000494183 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
COL25A1-204ENST00000494183 A6NN06 94 aa6.14□□□□□ -1.43
COL25A1-204ENST00000494183 KRTAP16-1A8MUX0 517 aa6.13□□□□□ -1.43
COL25A1-204ENST00000494183 A0A1B0GVY2 172 aa6.12□□□□□ -1.43
COL25A1-204ENST00000494183 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
COL25A1-204ENST00000494183 KRTAP13-3Q3SY46 172 aa6.11□□□□□ -1.43
COL25A1-204ENST00000494183 A0A0A0MQY5 61 aa6.09□□□□□ -1.43
COL25A1-204ENST00000494183 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
COL25A1-204ENST00000494183 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
COL25A1-204ENST00000494183 TNP1P09430 55 aa6.06□□□□□ -1.44
COL25A1-204ENST00000494183 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
COL25A1-204ENST00000494183 SPENQ96T58 3664 aaKnown RBP6.03□□□□□ -1.44
COL25A1-204ENST00000494183 H3BS24 57 aa6.01□□□□□ -1.45
COL25A1-204ENST00000494183 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
COL25A1-204ENST00000494183 P0C880 135 aa5.96□□□□□ -1.46
COL25A1-204ENST00000494183 H0YAA0 97 aa5.95□□□□□ -1.46
COL25A1-204ENST00000494183 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.47
COL25A1-204ENST00000494183 ANK3Q12955 4377 aaKnown RBP5.86□□□□□ -1.47
COL25A1-204ENST00000494183 NDUFAF8A1L188 74 aa5.84□□□□□ -1.47
COL25A1-204ENST00000494183 PP632Q6XCG6 107 aa5.82□□□□□ -1.48
COL25A1-204ENST00000494183 PRO2289Q9P1D8 64 aa5.75□□□□□ -1.49
COL25A1-204ENST00000494183 BSNQ9UPA5 3926 aa5.74□□□□□ -1.49
COL25A1-204ENST00000494183 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
COL25A1-204ENST00000494183 MT1HL1P0DM35 61 aa5.65□□□□□ -1.51
COL25A1-204ENST00000494183 KRTAP12-2P59991 146 aa5.62□□□□□ -1.51
COL25A1-204ENST00000494183 VPS13CQ709C8 3753 aa5.61□□□□□ -1.51
COL25A1-204ENST00000494183 KRTAP4-5Q9BYR2 181 aa5.56□□□□□ -1.52
COL25A1-204ENST00000494183 KRTAP12-1P59990 96 aa5.56□□□□□ -1.52
COL25A1-204ENST00000494183 KRTAP10-4P60372 401 aaPredicted RBP5.52□□□□□ -1.53
COL25A1-204ENST00000494183 CSMD3Q7Z407 3707 aa5.51□□□□□ -1.53
COL25A1-204ENST00000494183 KRTAP10-6P60371 365 aaPredicted RBP5.49□□□□□ -1.53
COL25A1-204ENST00000494183 ZNF469Q96JG9 3925 aaPredicted RBP5.48□□□□□ -1.53
COL25A1-204ENST00000494183 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
COL25A1-204ENST00000494183 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
COL25A1-204ENST00000494183 DNHD1Q96M86 4753 aa5.42□□□□□ -1.54
COL25A1-204ENST00000494183 KRTAP3-3Q9BYR6 98 aa5.34□□□□□ -1.55
COL25A1-204ENST00000494183 KRTAP3-2Q9BYR7 98 aa5.31□□□□□ -1.56
COL25A1-204ENST00000494183 DNAH5Q8TE73 4624 aa5.3□□□□□ -1.56
COL25A1-204ENST00000494183 DNAH9Q9NYC9 4486 aa5.26□□□□□ -1.57
COL25A1-204ENST00000494183 PLECQ15149 4684 aaKnown RBP5.23□□□□□ -1.57
COL25A1-204ENST00000494183 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms