RNA–Protein interactions for RNA: ENST00000492396.5

PDCD10-216, Transcript of programmed cell death 10, humanhuman

TSL 5 BASIC

Gene PDCD10, Length 814 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-216ENST00000492396 PTPN13Q12923 2485 aa0.7□□□□□ -2.3
PDCD10-216ENST00000492396 C9orf92A6NGG3 77 aa0.7□□□□□ -2.3
PDCD10-216ENST00000492396 MAP1BP46821 2468 aaKnown RBP0.7□□□□□ -2.3
PDCD10-216ENST00000492396 M0QZ58 72 aa0.69□□□□□ -2.3
PDCD10-216ENST00000492396 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
PDCD10-216ENST00000492396 PDZD2O15018 2839 aa0.69□□□□□ -2.3
PDCD10-216ENST00000492396 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
PDCD10-216ENST00000492396 DNAH11Q96DT5 4516 aa0.68□□□□□ -2.3
PDCD10-216ENST00000492396 MYCBP2O75592 4640 aa0.68□□□□□ -2.3
PDCD10-216ENST00000492396 KMT2AQ03164 3969 aa0.68□□□□□ -2.3
PDCD10-216ENST00000492396 ARHGAP5-AS1Q96IT6 56 aa0.67□□□□□ -2.3
PDCD10-216ENST00000492396 SETXQ7Z333 2677 aaKnown RBP0.67□□□□□ -2.3
PDCD10-216ENST00000492396 HIVEP3Q5T1R4 2406 aa0.66□□□□□ -2.3
PDCD10-216ENST00000492396 NBASA2RRP1 2371 aa0.66□□□□□ -2.3
PDCD10-216ENST00000492396 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
PDCD10-216ENST00000492396 SETD2Q9BYW2 2564 aaPredicted RBP0.65□□□□□ -2.31
PDCD10-216ENST00000492396 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
PDCD10-216ENST00000492396 ACANP16112 2415 aa0.64□□□□□ -2.31
PDCD10-216ENST00000492396 NF1P21359 2839 aa0.64□□□□□ -2.31
PDCD10-216ENST00000492396 H3BNG1 76 aa0.64□□□□□ -2.31
PDCD10-216ENST00000492396 SPRR2DP22532 72 aa0.64□□□□□ -2.31
PDCD10-216ENST00000492396 PKD1P98161 4303 aa0.64□□□□□ -2.31
PDCD10-216ENST00000492396 LPAP08519 4548 aa0.63□□□□□ -2.31
PDCD10-216ENST00000492396 TNP1P09430 55 aa0.63□□□□□ -2.31
PDCD10-216ENST00000492396 LEAP2Q969E1 77 aa0.63□□□□□ -2.31
PDCD10-216ENST00000492396 GCN1Q92616 2671 aaKnown RBP0.63□□□□□ -2.31
PDCD10-216ENST00000492396 DNAH3Q8TD57 4116 aa0.62□□□□□ -2.31
PDCD10-216ENST00000492396 FLNCQ14315 2725 aa0.62□□□□□ -2.31
PDCD10-216ENST00000492396 WNK1Q9H4A3 2382 aa0.62□□□□□ -2.31
PDCD10-216ENST00000492396 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
PDCD10-216ENST00000492396 NSD1Q96L73 2696 aaPredicted RBP0.61□□□□□ -2.31
PDCD10-216ENST00000492396 TOMM7Q9P0U1 55 aa0.61□□□□□ -2.31
PDCD10-216ENST00000492396 MUC5BQ9HC84 5762 aaPredicted RBP0.6□□□□□ -2.31
PDCD10-216ENST00000492396 ZZEF1O43149 2961 aa0.6□□□□□ -2.31
PDCD10-216ENST00000492396 COL6A5A8TX70 2615 aa0.6□□□□□ -2.31
PDCD10-216ENST00000492396 FLNBO75369 2602 aaKnown RBP0.59□□□□□ -2.31
PDCD10-216ENST00000492396 SPRR2BP35325 72 aa0.59□□□□□ -2.31
PDCD10-216ENST00000492396 CACNA1AO00555 2505 aa0.58□□□□□ -2.32
PDCD10-216ENST00000492396 TACC2O95359 2948 aa0.58□□□□□ -2.32
PDCD10-216ENST00000492396 STAB1Q9NY15 2570 aa0.58□□□□□ -2.32
PDCD10-216ENST00000492396 VPS13DQ5THJ4 4388 aa0.58□□□□□ -2.32
PDCD10-216ENST00000492396 APC2O95996 2303 aa0.58□□□□□ -2.32
PDCD10-216ENST00000492396 CHD7Q9P2D1 2997 aa0.57□□□□□ -2.32
PDCD10-216ENST00000492396 HECTD4Q9Y4D8 3996 aa0.57□□□□□ -2.32
PDCD10-216ENST00000492396 SPTBN4Q9H254 2564 aa0.57□□□□□ -2.32
PDCD10-216ENST00000492396 NCOR2Q9Y618 2525 aa0.57□□□□□ -2.32
PDCD10-216ENST00000492396 PKHD1L1Q86WI1 4243 aa0.56□□□□□ -2.32
PDCD10-216ENST00000492396 HRNRQ86YZ3 2850 aaPredicted RBP0.56□□□□□ -2.32
PDCD10-216ENST00000492396 ANK3Q12955 4377 aaKnown RBP0.56□□□□□ -2.32
PDCD10-216ENST00000492396 DNAH2Q9P225 4427 aa0.56□□□□□ -2.32
PDCD10-216ENST00000492396 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
PDCD10-216ENST00000492396 DEFB110Q30KQ9 67 aa0.56□□□□□ -2.32
PDCD10-216ENST00000492396 ACACAQ13085 2346 aa0.55□□□□□ -2.32
PDCD10-216ENST00000492396 MAST4O15021 2626 aa0.55□□□□□ -2.32
PDCD10-216ENST00000492396 CUBNO60494 3623 aa0.55□□□□□ -2.32
PDCD10-216ENST00000492396 HSPG2P98160 4391 aa0.55□□□□□ -2.32
PDCD10-216ENST00000492396 SPENQ96T58 3664 aaKnown RBP0.55□□□□□ -2.32
PDCD10-216ENST00000492396 DMXL1Q9Y485 3027 aa0.55□□□□□ -2.32
PDCD10-216ENST00000492396 DMBT1Q9UGM3 2413 aaPredicted RBP0.55□□□□□ -2.32
PDCD10-216ENST00000492396 MTORP42345 2549 aa0.55□□□□□ -2.32
PDCD10-216ENST00000492396 ANKRD11Q6UB99 2663 aaPredicted RBP0.54□□□□□ -2.32
PDCD10-216ENST00000492396 DYNC2H1Q8NCM8 4307 aaKnown RBP0.54□□□□□ -2.32
PDCD10-216ENST00000492396 LINC01590Q5TEZ4 76 aa0.54□□□□□ -2.32
PDCD10-216ENST00000492396 TTTY10Q9BZA0 68 aa0.54□□□□□ -2.32
PDCD10-216ENST00000492396 DNAH9Q9NYC9 4486 aa0.53□□□□□ -2.32
PDCD10-216ENST00000492396 PRCDQ00LT1 54 aa0.53□□□□□ -2.32
PDCD10-216ENST00000492396 EPG5Q9HCE0 2579 aa0.52□□□□□ -2.33
PDCD10-216ENST00000492396 COL7A1Q02388 2944 aa0.52□□□□□ -2.33
PDCD10-216ENST00000492396 APOBP04114 4563 aaKnown RBP0.52□□□□□ -2.33
PDCD10-216ENST00000492396 RIF1Q5UIP0 2472 aaKnown RBP0.52□□□□□ -2.33
PDCD10-216ENST00000492396 LRRK2Q5S007 2527 aa0.52□□□□□ -2.33
PDCD10-216ENST00000492396 NBPF19A0A087WUL8 3843 aa0.51□□□□□ -2.33
PDCD10-216ENST00000492396 FLGP20930 4061 aaPredicted RBP0.51□□□□□ -2.33
PDCD10-216ENST00000492396 SPRR2AP35326 72 aa0.51□□□□□ -2.33
PDCD10-216ENST00000492396 RANBP2P49792 3224 aaKnown RBP0.51□□□□□ -2.33
PDCD10-216ENST00000492396 CRYBG3Q68DQ2 2970 aa0.51□□□□□ -2.33
PDCD10-216ENST00000492396 CCDC168Q8NDH2 2452 aa0.51□□□□□ -2.33
PDCD10-216ENST00000492396 TENM2Q9NT68 2774 aa0.51□□□□□ -2.33
PDCD10-216ENST00000492396 USP9YO00507 2555 aaPredicted RBP0.51□□□□□ -2.33
PDCD10-216ENST00000492396 ANKHD1Q8IWZ3 2542 aaKnown RBP0.5□□□□□ -2.33
PDCD10-216ENST00000492396 PKHD1P08F94 4074 aa0.5□□□□□ -2.33
PDCD10-216ENST00000492396 DNAH7Q8WXX0 4024 aa0.5□□□□□ -2.33
PDCD10-216ENST00000492396 FAT3Q8TDW7 4589 aa0.5□□□□□ -2.33
PDCD10-216ENST00000492396 DNAH6Q9C0G6 4158 aa0.5□□□□□ -2.33
PDCD10-216ENST00000492396 IGSF10Q6WRI0 2623 aa0.5□□□□□ -2.33
PDCD10-216ENST00000492396 DNAH8Q96JB1 4490 aa0.5□□□□□ -2.33
PDCD10-216ENST00000492396 SONP18583 2426 aaKnown RBP0.49□□□□□ -2.33
PDCD10-216ENST00000492396 DCHS2Q6V1P9 2916 aa0.49□□□□□ -2.33
PDCD10-216ENST00000492396 UTP20O75691 2785 aaKnown RBP0.49□□□□□ -2.33
PDCD10-216ENST00000492396 HIVEP1P15822 2718 aa0.49□□□□□ -2.33
PDCD10-216ENST00000492396 FRYQ5TBA9 3013 aa0.49□□□□□ -2.33
PDCD10-216ENST00000492396 LRP1BQ9NZR2 4599 aa0.49□□□□□ -2.33
PDCD10-216ENST00000492396 NBEAL2Q6ZNJ1 2754 aa0.48□□□□□ -2.33
PDCD10-216ENST00000492396 SPART-AS1P0CW21 52 aa0.48□□□□□ -2.33
PDCD10-216ENST00000492396 KRTAP6-2Q3LI66 62 aa0.48□□□□□ -2.33
PDCD10-216ENST00000492396 KRTAP8-1Q8IUC2 63 aa0.48□□□□□ -2.33
PDCD10-216ENST00000492396 COL12A1Q99715 3063 aa0.48□□□□□ -2.33
PDCD10-216ENST00000492396 FAT4Q6V0I7 4981 aa0.48□□□□□ -2.33
PDCD10-216ENST00000492396 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
PDCD10-216ENST00000492396 ACACBO00763 2458 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms