RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 BAALC-AS2P0C853 105 aa4.24□□□□□ -1.73
SMARCB1-207ENST00000491967 MPLKIPQ8TAP9 179 aa4.24□□□□□ -1.73
SMARCB1-207ENST00000491967 LINC00472Q9H8W2 130 aa4.24□□□□□ -1.73
SMARCB1-207ENST00000491967 SPCS1Q9Y6A9 102 aa4.24□□□□□ -1.73
SMARCB1-207ENST00000491967 A0A1B0GV72 72 aa4.22□□□□□ -1.73
SMARCB1-207ENST00000491967 C9JAW5 83 aa4.22□□□□□ -1.73
SMARCB1-207ENST00000491967 TMEM256-PLSCR3K7ERE1 68 aa4.22□□□□□ -1.73
SMARCB1-207ENST00000491967 DSCR10P59022 87 aa4.22□□□□□ -1.73
SMARCB1-207ENST00000491967 LINC00313P59037 77 aa4.22□□□□□ -1.73
SMARCB1-207ENST00000491967 NOTCH2NLQ7Z3S9 236 aa4.22□□□□□ -1.73
SMARCB1-207ENST00000491967 MTURNQ8N3F0 131 aa4.21□□□□□ -1.74
SMARCB1-207ENST00000491967 ANKRD29Q8N6D5 301 aa4.21□□□□□ -1.74
SMARCB1-207ENST00000491967 K7EP34 96 aa4.2□□□□□ -1.74
SMARCB1-207ENST00000491967 IGKV4-1P06312 121 aa4.19□□□□□ -1.74
SMARCB1-207ENST00000491967 HRES1P13985 223 aa4.19□□□□□ -1.74
SMARCB1-207ENST00000491967 UBE2V1Q13404 147 aa4.19□□□□□ -1.74
SMARCB1-207ENST00000491967 MT2AP02795 61 aa4.18□□□□□ -1.74
SMARCB1-207ENST00000491967 GTF2H5Q6ZYL4 71 aa4.18□□□□□ -1.74
SMARCB1-207ENST00000491967 SIGMAR1Q99720 223 aa4.18□□□□□ -1.74
SMARCB1-207ENST00000491967 USH2AO75445 5202 aa4.18□□□□□ -1.74
SMARCB1-207ENST00000491967 A0A1B0GV90 55 aa4.17□□□□□ -1.74
SMARCB1-207ENST00000491967 CCKP06307 115 aa4.17□□□□□ -1.74
SMARCB1-207ENST00000491967 H3BT86 120 aa4.16□□□□□ -1.74
SMARCB1-207ENST00000491967 RBM3P98179 157 aaKnown RBP4.16□□□□□ -1.74
SMARCB1-207ENST00000491967 KRTAP9-3Q9BYQ3 159 aa4.16□□□□□ -1.74
SMARCB1-207ENST00000491967 SSPOA2VEC9 5147 aa4.16□□□□□ -1.74
SMARCB1-207ENST00000491967 MT1FP04733 61 aa4.15□□□□□ -1.75
SMARCB1-207ENST00000491967 DEFB116Q30KQ4 102 aa4.15□□□□□ -1.75
SMARCB1-207ENST00000491967 PRO0461Q9UI25 63 aa4.15□□□□□ -1.75
SMARCB1-207ENST00000491967 A0A1B0GVX0 72 aa4.14□□□□□ -1.75
SMARCB1-207ENST00000491967 C8orf87E5RJ46 101 aa4.14□□□□□ -1.75
SMARCB1-207ENST00000491967 DSCR8Q96T75 97 aa4.14□□□□□ -1.75
SMARCB1-207ENST00000491967 C14orf132Q9NPU4 83 aa4.14□□□□□ -1.75
SMARCB1-207ENST00000491967 SYNE2Q8WXH0 6885 aaKnown RBP4.14□□□□□ -1.75
SMARCB1-207ENST00000491967 IGHV6-1A0A0B4J1U7 121 aa4.13□□□□□ -1.75
SMARCB1-207ENST00000491967 JMJD7-PLA2G4BH0Y9G9 81 aa4.13□□□□□ -1.75
SMARCB1-207ENST00000491967 VPS25Q9BRG1 176 aa4.13□□□□□ -1.75
SMARCB1-207ENST00000491967 RBM12B-AS1Q9P1G2 102 aa4.13□□□□□ -1.75
SMARCB1-207ENST00000491967 F8W1H4 67 aa4.12□□□□□ -1.75
SMARCB1-207ENST00000491967 C21orf62-AS1Q17RA5 79 aa4.12□□□□□ -1.75
SMARCB1-207ENST00000491967 J3KT08 172 aa4.11□□□□□ -1.75
SMARCB1-207ENST00000491967 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
SMARCB1-207ENST00000491967 Q6ZQT0 140 aa4.11□□□□□ -1.75
SMARCB1-207ENST00000491967 Q8N9P0 234 aaPredicted RBP4.11□□□□□ -1.75
SMARCB1-207ENST00000491967 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
SMARCB1-207ENST00000491967 FAM236DA0A1B0GTK5 79 aa4.1□□□□□ -1.75
SMARCB1-207ENST00000491967 A0A1B0GW54 56 aa4.1□□□□□ -1.75
SMARCB1-207ENST00000491967 FAM236CP0DP71 79 aa4.1□□□□□ -1.75
SMARCB1-207ENST00000491967 ZCCHC13Q8WW36 166 aaKnown RBP4.1□□□□□ -1.75
SMARCB1-207ENST00000491967 FCGBPQ9Y6R7 5405 aaPredicted RBP4.1□□□□□ -1.75
SMARCB1-207ENST00000491967 LOC110117498A0A087WWA1 95 aa4.09□□□□□ -1.75
SMARCB1-207ENST00000491967 SPINK7P58062 85 aa4.09□□□□□ -1.75
SMARCB1-207ENST00000491967 ETDBQ3ZM63 59 aa4.09□□□□□ -1.75
SMARCB1-207ENST00000491967 PDE6GP18545 87 aa4.08□□□□□ -1.76
SMARCB1-207ENST00000491967 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
SMARCB1-207ENST00000491967 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
SMARCB1-207ENST00000491967 A8MWP4 228 aa4.06□□□□□ -1.76
SMARCB1-207ENST00000491967 IGKV3D-7A0A0C4DH55 119 aa4.04□□□□□ -1.76
SMARCB1-207ENST00000491967 NDUFB1O75438 58 aa4.04□□□□□ -1.76
SMARCB1-207ENST00000491967 KRTAP4-12Q9BQ66 201 aa4.04□□□□□ -1.76
SMARCB1-207ENST00000491967 C8orf17Q9NRJ1 99 aa4.04□□□□□ -1.76
SMARCB1-207ENST00000491967 NREPQ16612 68 aa4.02□□□□□ -1.77
SMARCB1-207ENST00000491967 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
SMARCB1-207ENST00000491967 PRR15Q8IV56 129 aa4.02□□□□□ -1.77
SMARCB1-207ENST00000491967 Q6ZVQ6 151 aa4.01□□□□□ -1.77
SMARCB1-207ENST00000491967 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
SMARCB1-207ENST00000491967 KRTAP9-4Q9BYQ2 154 aa4.01□□□□□ -1.77
SMARCB1-207ENST00000491967 LINC00846Q9NV44 126 aa4□□□□□ -1.77
SMARCB1-207ENST00000491967 KRTAP4-8A0A0G2JLE6 195 aa3.99□□□□□ -1.77
SMARCB1-207ENST00000491967 WFDC13Q8IUB5 93 aa3.99□□□□□ -1.77
SMARCB1-207ENST00000491967 MMP24-AS1A0A0U1RRL7 71 aa3.98□□□□□ -1.77
SMARCB1-207ENST00000491967 TMEM254Q8TBM7 123 aa3.98□□□□□ -1.77
SMARCB1-207ENST00000491967 UBL5Q9BZL1 73 aa3.98□□□□□ -1.77
SMARCB1-207ENST00000491967 BPY2O14599 106 aa3.97□□□□□ -1.77
SMARCB1-207ENST00000491967 MRPL34Q9BQ48 92 aaKnown RBP3.97□□□□□ -1.77
SMARCB1-207ENST00000491967 ACYP1P07311 99 aa3.95□□□□□ -1.78
SMARCB1-207ENST00000491967 H1FX-AS1Q4G0G2 97 aa3.95□□□□□ -1.78
SMARCB1-207ENST00000491967 hDV103S1A0JD37 113 aa3.94□□□□□ -1.78
SMARCB1-207ENST00000491967 J3QR89 54 aa3.94□□□□□ -1.78
SMARCB1-207ENST00000491967 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
SMARCB1-207ENST00000491967 FAM240AA0A1B0GVK7 77 aa3.93□□□□□ -1.78
SMARCB1-207ENST00000491967 K7EQZ3 153 aa3.93□□□□□ -1.78
SMARCB1-207ENST00000491967 Q5W150 140 aa3.93□□□□□ -1.78
SMARCB1-207ENST00000491967 Q8N9L7 120 aa3.93□□□□□ -1.78
SMARCB1-207ENST00000491967 NEBP20929 6669 aa3.92□□□□□ -1.78
SMARCB1-207ENST00000491967 KRTAP20-1Q3LI63 56 aa3.9□□□□□ -1.79
SMARCB1-207ENST00000491967 CXCL6P80162 114 aa3.89□□□□□ -1.79
SMARCB1-207ENST00000491967 K7ERU9 68 aa3.88□□□□□ -1.79
SMARCB1-207ENST00000491967 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
SMARCB1-207ENST00000491967 LINC00643Q86TS7 51 aa3.88□□□□□ -1.79
SMARCB1-207ENST00000491967 ATP5EP2Q5VTU8 51 aa3.87□□□□□ -1.79
SMARCB1-207ENST00000491967 IGKV2D-30A0A075B6S6 120 aa3.86□□□□□ -1.79
SMARCB1-207ENST00000491967 NDUFS5O43920 106 aa3.86□□□□□ -1.79
SMARCB1-207ENST00000491967 IGKV2-30P06310 120 aa3.86□□□□□ -1.79
SMARCB1-207ENST00000491967 HIST1H4AP62805 103 aaKnown RBP3.86□□□□□ -1.79
SMARCB1-207ENST00000491967 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
SMARCB1-207ENST00000491967 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
SMARCB1-207ENST00000491967 HCG22E2RYF7 251 aa3.85□□□□□ -1.79
SMARCB1-207ENST00000491967 KRTAP3-1Q9BYR8 98 aa3.85□□□□□ -1.79
SMARCB1-207ENST00000491967 C4orf26Q17RF5 130 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms