RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
SUPT20H-220ENST00000490716 IGKV4-1P06312 121 aa4.62□□□□□ -1.67
SUPT20H-220ENST00000490716 PDE6GP18545 87 aa4.62□□□□□ -1.67
SUPT20H-220ENST00000490716 LINC00313P59037 77 aa4.62□□□□□ -1.67
SUPT20H-220ENST00000490716 IGKV3D-7A0A0C4DH55 119 aa4.62□□□□□ -1.67
SUPT20H-220ENST00000490716 C8orf87E5RJ46 101 aa4.62□□□□□ -1.67
SUPT20H-220ENST00000490716 C9JAW5 83 aa4.61□□□□□ -1.67
SUPT20H-220ENST00000490716 J3KT08 172 aa4.61□□□□□ -1.67
SUPT20H-220ENST00000490716 DSCR8Q96T75 97 aa4.61□□□□□ -1.67
SUPT20H-220ENST00000490716 SCGB1C2P0DMR2 95 aa4.61□□□□□ -1.67
SUPT20H-220ENST00000490716 A8MWP4 228 aa4.6□□□□□ -1.67
SUPT20H-220ENST00000490716 DEFB116Q30KQ4 102 aa4.6□□□□□ -1.67
SUPT20H-220ENST00000490716 MMP24-AS1A0A0U1RRL7 71 aa4.59□□□□□ -1.67
SUPT20H-220ENST00000490716 C14orf132Q9NPU4 83 aa4.59□□□□□ -1.67
SUPT20H-220ENST00000490716 A0A1B0GV72 72 aa4.58□□□□□ -1.68
SUPT20H-220ENST00000490716 ATP11AUNQ6ZP68 121 aa4.57□□□□□ -1.68
SUPT20H-220ENST00000490716 PRR15Q8IV56 129 aa4.57□□□□□ -1.68
SUPT20H-220ENST00000490716 USH2AO75445 5202 aa4.57□□□□□ -1.68
SUPT20H-220ENST00000490716 LYRM7Q5U5X0 104 aa4.57□□□□□ -1.68
SUPT20H-220ENST00000490716 C8orf17Q9NRJ1 99 aa4.56□□□□□ -1.68
SUPT20H-220ENST00000490716 K7EP34 96 aa4.56□□□□□ -1.68
SUPT20H-220ENST00000490716 ZCCHC13Q8WW36 166 aaKnown RBP4.55□□□□□ -1.68
SUPT20H-220ENST00000490716 KRTAP9-6A0A140TA67 174 aa4.55□□□□□ -1.68
SUPT20H-220ENST00000490716 SSPOA2VEC9 5147 aa4.54□□□□□ -1.68
SUPT20H-220ENST00000490716 COL5A1-AS1Q5SY13 56 aa4.54□□□□□ -1.68
SUPT20H-220ENST00000490716 SIGMAR1Q99720 223 aa4.54□□□□□ -1.68
SUPT20H-220ENST00000490716 IGHV6-1A0A0B4J1U7 121 aa4.53□□□□□ -1.68
SUPT20H-220ENST00000490716 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
SUPT20H-220ENST00000490716 MT2AP02795 61 aa4.53□□□□□ -1.68
SUPT20H-220ENST00000490716 MTURNQ8N3F0 131 aa4.52□□□□□ -1.69
SUPT20H-220ENST00000490716 TMEM254Q8TBM7 123 aa4.52□□□□□ -1.69
SUPT20H-220ENST00000490716 K7EQZ3 153 aa4.52□□□□□ -1.69
SUPT20H-220ENST00000490716 SPCS1Q9Y6A9 102 aa4.52□□□□□ -1.69
SUPT20H-220ENST00000490716 BATFQ16520 125 aa4.51□□□□□ -1.69
SUPT20H-220ENST00000490716 Q6ZVQ6 151 aa4.5□□□□□ -1.69
SUPT20H-220ENST00000490716 MT1FP04733 61 aa4.5□□□□□ -1.69
SUPT20H-220ENST00000490716 Q5W150 140 aa4.49□□□□□ -1.69
SUPT20H-220ENST00000490716 LINC00846Q9NV44 126 aa4.49□□□□□ -1.69
SUPT20H-220ENST00000490716 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
SUPT20H-220ENST00000490716 LCE2BO14633 110 aa4.47□□□□□ -1.69
SUPT20H-220ENST00000490716 VPS25Q9BRG1 176 aa4.47□□□□□ -1.69
SUPT20H-220ENST00000490716 MRPL34Q9BQ48 92 aaKnown RBP4.46□□□□□ -1.69
SUPT20H-220ENST00000490716 F8W1H4 67 aa4.46□□□□□ -1.7
SUPT20H-220ENST00000490716 SPINK7P58062 85 aa4.45□□□□□ -1.7
SUPT20H-220ENST00000490716 NREPQ16612 68 aa4.45□□□□□ -1.7
SUPT20H-220ENST00000490716 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
SUPT20H-220ENST00000490716 hDV103S1A0JD37 113 aa4.43□□□□□ -1.7
SUPT20H-220ENST00000490716 NDUFB1O75438 58 aa4.41□□□□□ -1.7
SUPT20H-220ENST00000490716 CXCL6P80162 114 aa4.41□□□□□ -1.7
SUPT20H-220ENST00000490716 BPY2O14599 106 aa4.4□□□□□ -1.71
SUPT20H-220ENST00000490716 WFDC13Q8IUB5 93 aa4.4□□□□□ -1.71
SUPT20H-220ENST00000490716 Q8N9L7 120 aa4.4□□□□□ -1.71
SUPT20H-220ENST00000490716 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
SUPT20H-220ENST00000490716 FAM240AA0A1B0GVK7 77 aa4.38□□□□□ -1.71
SUPT20H-220ENST00000490716 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
SUPT20H-220ENST00000490716 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
SUPT20H-220ENST00000490716 GTF2H5Q6ZYL4 71 aa4.36□□□□□ -1.71
SUPT20H-220ENST00000490716 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
SUPT20H-220ENST00000490716 ETDBQ3ZM63 59 aa4.35□□□□□ -1.71
SUPT20H-220ENST00000490716 HCG22E2RYF7 251 aa4.34□□□□□ -1.71
SUPT20H-220ENST00000490716 IGKV2-30P06310 120 aa4.34□□□□□ -1.71
SUPT20H-220ENST00000490716 CASC2Q6XLA1 102 aa4.34□□□□□ -1.71
SUPT20H-220ENST00000490716 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.72
SUPT20H-220ENST00000490716 H1FX-AS1Q4G0G2 97 aa4.32□□□□□ -1.72
SUPT20H-220ENST00000490716 M0R2T5 61 aa4.32□□□□□ -1.72
SUPT20H-220ENST00000490716 KRTAP19-6Q3LI70 58 aa4.31□□□□□ -1.72
SUPT20H-220ENST00000490716 UBL5Q9BZL1 73 aa4.3□□□□□ -1.72
SUPT20H-220ENST00000490716 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
SUPT20H-220ENST00000490716 KRTAP19-1Q8IUB9 90 aa4.3□□□□□ -1.72
SUPT20H-220ENST00000490716 ACYP1P07311 99 aa4.29□□□□□ -1.72
SUPT20H-220ENST00000490716 PCP4L1A6NKN8 68 aa4.29□□□□□ -1.72
SUPT20H-220ENST00000490716 TP53AIP1Q9HCN2 124 aa4.27□□□□□ -1.73
SUPT20H-220ENST00000490716 ATP5EP2Q5VTU8 51 aa4.25□□□□□ -1.73
SUPT20H-220ENST00000490716 A0A1B0GV90 55 aa4.25□□□□□ -1.73
SUPT20H-220ENST00000490716 CYP4F30PQ9H0H9 118 aa4.24□□□□□ -1.73
SUPT20H-220ENST00000490716 SPRR2GQ9BYE4 73 aa4.23□□□□□ -1.73
SUPT20H-220ENST00000490716 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
SUPT20H-220ENST00000490716 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
SUPT20H-220ENST00000490716 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
SUPT20H-220ENST00000490716 FAM236DA0A1B0GTK5 79 aa4.21□□□□□ -1.74
SUPT20H-220ENST00000490716 FAM236CP0DP71 79 aa4.21□□□□□ -1.74
SUPT20H-220ENST00000490716 A0A087WVE0 104 aa4.21□□□□□ -1.74
SUPT20H-220ENST00000490716 MT1BP07438 61 aa4.21□□□□□ -1.74
SUPT20H-220ENST00000490716 LCA10Q71F78 164 aa4.21□□□□□ -1.74
SUPT20H-220ENST00000490716 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
SUPT20H-220ENST00000490716 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
SUPT20H-220ENST00000490716 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
SUPT20H-220ENST00000490716 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
SUPT20H-220ENST00000490716 NDUFS5O43920 106 aa4.18□□□□□ -1.74
SUPT20H-220ENST00000490716 KLKP1Q107X0 134 aa4.16□□□□□ -1.74
SUPT20H-220ENST00000490716 TRAV22A0A0B4J277 110 aa4.16□□□□□ -1.74
SUPT20H-220ENST00000490716 HIST1H4AP62805 103 aaKnown RBP4.16□□□□□ -1.74
SUPT20H-220ENST00000490716 UQCRQO14949 82 aa4.15□□□□□ -1.74
SUPT20H-220ENST00000490716 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.75
SUPT20H-220ENST00000490716 C1orf64Q8NEQ6 169 aa4.14□□□□□ -1.75
SUPT20H-220ENST00000490716 LOC101927531A0A1B0GV80 90 aa4.14□□□□□ -1.75
SUPT20H-220ENST00000490716 H0YAA0 97 aa4.14□□□□□ -1.75
SUPT20H-220ENST00000490716 S4R3F8 94 aa4.12□□□□□ -1.75
SUPT20H-220ENST00000490716 ATOX1O00244 68 aa4.08□□□□□ -1.76
SUPT20H-220ENST00000490716 KRTAP9-7A8MTY7 169 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms