RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 VPS25Q9BRG1 176 aa8.17□□□□□ -1.1
VPS26A-207ENST00000490696 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
VPS26A-207ENST00000490696 C9JAW5 83 aa8.16□□□□□ -1.1
VPS26A-207ENST00000490696 SIGMAR1Q99720 223 aa8.16□□□□□ -1.1
VPS26A-207ENST00000490696 IGKV4-1P06312 121 aa8.15□□□□□ -1.1
VPS26A-207ENST00000490696 JMJD7-PLA2G4BH0Y9G9 81 aa8.14□□□□□ -1.11
VPS26A-207ENST00000490696 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
VPS26A-207ENST00000490696 DEFB116Q30KQ4 102 aa8.13□□□□□ -1.11
VPS26A-207ENST00000490696 KRTAP19-2Q3LHN2 52 aa8.13□□□□□ -1.11
VPS26A-207ENST00000490696 C20orf166-AS1Q96NR2 134 aa8.13□□□□□ -1.11
VPS26A-207ENST00000490696 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
VPS26A-207ENST00000490696 DSCR10P59022 87 aa8.12□□□□□ -1.11
VPS26A-207ENST00000490696 Q6ZQT0 140 aa8.12□□□□□ -1.11
VPS26A-207ENST00000490696 LOC110117498A0A087WWA1 95 aa8.11□□□□□ -1.11
VPS26A-207ENST00000490696 KRTAP4-9Q9BYQ8 210 aa8.11□□□□□ -1.11
VPS26A-207ENST00000490696 A8MUU9 505 aa8.1□□□□□ -1.11
VPS26A-207ENST00000490696 C21orf62-AS1Q17RA5 79 aa8.1□□□□□ -1.11
VPS26A-207ENST00000490696 ATP11AUNQ6ZP68 121 aa8.1□□□□□ -1.11
VPS26A-207ENST00000490696 PDE6GP18545 87 aa8.08□□□□□ -1.12
VPS26A-207ENST00000490696 LINC00313P59037 77 aa8.08□□□□□ -1.12
VPS26A-207ENST00000490696 C14orf132Q9NPU4 83 aa8.08□□□□□ -1.12
VPS26A-207ENST00000490696 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
VPS26A-207ENST00000490696 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
VPS26A-207ENST00000490696 A0A1B0GW54 56 aa8.06□□□□□ -1.12
VPS26A-207ENST00000490696 H3BT86 120 aa8.06□□□□□ -1.12
VPS26A-207ENST00000490696 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
VPS26A-207ENST00000490696 IGHV6-1A0A0B4J1U7 121 aa8.04□□□□□ -1.12
VPS26A-207ENST00000490696 J3KT08 172 aa8.03□□□□□ -1.12
VPS26A-207ENST00000490696 KRTAP4-2Q9BYR5 136 aa8.03□□□□□ -1.12
VPS26A-207ENST00000490696 A0A1B0GVX0 72 aa8.02□□□□□ -1.13
VPS26A-207ENST00000490696 COL5A1-AS1Q5SY13 56 aa8.02□□□□□ -1.13
VPS26A-207ENST00000490696 SPCS1Q9Y6A9 102 aa8.02□□□□□ -1.13
VPS26A-207ENST00000490696 C8orf87E5RJ46 101 aa8□□□□□ -1.13
VPS26A-207ENST00000490696 MT1HP80294 61 aa7.98□□□□□ -1.13
VPS26A-207ENST00000490696 A8MWP4 228 aa7.95□□□□□ -1.14
VPS26A-207ENST00000490696 NDUFB1O75438 58 aa7.95□□□□□ -1.14
VPS26A-207ENST00000490696 NREPQ16612 68 aa7.94□□□□□ -1.14
VPS26A-207ENST00000490696 IGKV3D-7A0A0C4DH55 119 aa7.93□□□□□ -1.14
VPS26A-207ENST00000490696 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
VPS26A-207ENST00000490696 K7EP34 96 aa7.92□□□□□ -1.14
VPS26A-207ENST00000490696 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
VPS26A-207ENST00000490696 PCP4L1A6NKN8 68 aa7.91□□□□□ -1.14
VPS26A-207ENST00000490696 C8orf17Q9NRJ1 99 aa7.9□□□□□ -1.14
VPS26A-207ENST00000490696 PRR15Q8IV56 129 aa7.89□□□□□ -1.15
VPS26A-207ENST00000490696 Q8N9P0 234 aaPredicted RBP7.88□□□□□ -1.15
VPS26A-207ENST00000490696 FLGP20930 4061 aaPredicted RBP7.86□□□□□ -1.15
VPS26A-207ENST00000490696 ZCCHC13Q8WW36 166 aaKnown RBP7.84□□□□□ -1.15
VPS26A-207ENST00000490696 Q6ZVQ6 151 aa7.83□□□□□ -1.16
VPS26A-207ENST00000490696 MMP24-AS1A0A0U1RRL7 71 aa7.82□□□□□ -1.16
VPS26A-207ENST00000490696 GTF2H5Q6ZYL4 71 aa7.82□□□□□ -1.16
VPS26A-207ENST00000490696 K7EQZ3 153 aa7.81□□□□□ -1.16
VPS26A-207ENST00000490696 BPY2O14599 106 aa7.81□□□□□ -1.16
VPS26A-207ENST00000490696 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
VPS26A-207ENST00000490696 M0R2T5 61 aa7.8□□□□□ -1.16
VPS26A-207ENST00000490696 HRES1P13985 223 aa7.8□□□□□ -1.16
VPS26A-207ENST00000490696 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
VPS26A-207ENST00000490696 TMEM254Q8TBM7 123 aa7.78□□□□□ -1.16
VPS26A-207ENST00000490696 F8W1H4 67 aa7.77□□□□□ -1.17
VPS26A-207ENST00000490696 MRPL34Q9BQ48 92 aaKnown RBP7.77□□□□□ -1.17
VPS26A-207ENST00000490696 KRTAP4-11Q9BYQ6 195 aa7.77□□□□□ -1.17
VPS26A-207ENST00000490696 hDV103S1A0JD37 113 aa7.76□□□□□ -1.17
VPS26A-207ENST00000490696 LINC00846Q9NV44 126 aa7.76□□□□□ -1.17
VPS26A-207ENST00000490696 SPINK7P58062 85 aa7.74□□□□□ -1.17
VPS26A-207ENST00000490696 Q8N9L7 120 aa7.73□□□□□ -1.17
VPS26A-207ENST00000490696 RBM12B-AS1Q9P1G2 102 aa7.73□□□□□ -1.17
VPS26A-207ENST00000490696 ETDBQ3ZM63 59 aa7.72□□□□□ -1.17
VPS26A-207ENST00000490696 UBL5Q9BZL1 73 aa7.72□□□□□ -1.17
VPS26A-207ENST00000490696 FAM236DA0A1B0GTK5 79 aa7.71□□□□□ -1.18
VPS26A-207ENST00000490696 FAM236CP0DP71 79 aa7.71□□□□□ -1.18
VPS26A-207ENST00000490696 KRTAP9-7A8MTY7 169 aa7.7□□□□□ -1.18
VPS26A-207ENST00000490696 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
VPS26A-207ENST00000490696 NDUFS5O43920 106 aa7.67□□□□□ -1.18
VPS26A-207ENST00000490696 CASC2Q6XLA1 102 aa7.66□□□□□ -1.18
VPS26A-207ENST00000490696 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
VPS26A-207ENST00000490696 Q5W150 140 aa7.63□□□□□ -1.19
VPS26A-207ENST00000490696 HCG22E2RYF7 251 aa7.61□□□□□ -1.19
VPS26A-207ENST00000490696 CXCL6P80162 114 aa7.59□□□□□ -1.19
VPS26A-207ENST00000490696 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
VPS26A-207ENST00000490696 IGKV2D-30A0A075B6S6 120 aa7.54□□□□□ -1.2
VPS26A-207ENST00000490696 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
VPS26A-207ENST00000490696 FAM240AA0A1B0GVK7 77 aa7.53□□□□□ -1.2
VPS26A-207ENST00000490696 ACYP1P07311 99 aa7.53□□□□□ -1.2
VPS26A-207ENST00000490696 C7orf65Q6ZTY9 151 aa7.53□□□□□ -1.2
VPS26A-207ENST00000490696 A0A1B0GV90 55 aa7.5□□□□□ -1.21
VPS26A-207ENST00000490696 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
VPS26A-207ENST00000490696 MT2AP02795 61 aa7.49□□□□□ -1.21
VPS26A-207ENST00000490696 USH2AO75445 5202 aa7.46□□□□□ -1.21
VPS26A-207ENST00000490696 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
VPS26A-207ENST00000490696 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
VPS26A-207ENST00000490696 ATP5EP2Q5VTU8 51 aa7.44□□□□□ -1.22
VPS26A-207ENST00000490696 MT1FP04733 61 aa7.43□□□□□ -1.22
VPS26A-207ENST00000490696 LCE5AQ5TCM9 118 aa7.42□□□□□ -1.22
VPS26A-207ENST00000490696 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
VPS26A-207ENST00000490696 KRTAP5-3Q6L8H2 238 aa7.4□□□□□ -1.22
VPS26A-207ENST00000490696 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
VPS26A-207ENST00000490696 LINC00643Q86TS7 51 aa7.37□□□□□ -1.23
VPS26A-207ENST00000490696 FCGBPQ9Y6R7 5405 aaPredicted RBP7.37□□□□□ -1.23
VPS26A-207ENST00000490696 HIST1H4AP62805 103 aaKnown RBP7.36□□□□□ -1.23
VPS26A-207ENST00000490696 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
VPS26A-207ENST00000490696 SYNE2Q8WXH0 6885 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms