RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 K7EQZ3 153 aa5.47□□□□□ -1.53
CACUL1-205ENST00000490610 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
CACUL1-205ENST00000490610 LRP1BQ9NZR2 4599 aa5.46□□□□□ -1.54
CACUL1-205ENST00000490610 RYR2Q92736 4967 aa5.46□□□□□ -1.54
CACUL1-205ENST00000490610 CCDC179H3BU77 68 aa5.46□□□□□ -1.54
CACUL1-205ENST00000490610 NDUFB1O75438 58 aa5.46□□□□□ -1.54
CACUL1-205ENST00000490610 HCG22E2RYF7 251 aa5.45□□□□□ -1.54
CACUL1-205ENST00000490610 DEFB116Q30KQ4 102 aa5.45□□□□□ -1.54
CACUL1-205ENST00000490610 VPS13BQ7Z7G8 4022 aa5.44□□□□□ -1.54
CACUL1-205ENST00000490610 CDK2AP2O75956 126 aa5.44□□□□□ -1.54
CACUL1-205ENST00000490610 KRTAP1-4P0C5Y4 121 aa5.44□□□□□ -1.54
CACUL1-205ENST00000490610 PRR15Q8IV56 129 aa5.44□□□□□ -1.54
CACUL1-205ENST00000490610 A0A087X002 238 aa5.43□□□□□ -1.54
CACUL1-205ENST00000490610 Q96NJ1 140 aa5.43□□□□□ -1.54
CACUL1-205ENST00000490610 DYNC1H1Q14204 4646 aaKnown RBP5.43□□□□□ -1.54
CACUL1-205ENST00000490610 ASB16-AS1Q495Z4 193 aa5.42□□□□□ -1.54
CACUL1-205ENST00000490610 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
CACUL1-205ENST00000490610 Q5XG85 94 aa5.41□□□□□ -1.54
CACUL1-205ENST00000490610 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
CACUL1-205ENST00000490610 SMR3BP02814 79 aaPredicted RBP5.4□□□□□ -1.54
CACUL1-205ENST00000490610 TYMSOSQ8TAI1 123 aa5.4□□□□□ -1.54
CACUL1-205ENST00000490610 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
CACUL1-205ENST00000490610 CASC2Q6XLA1 102 aa5.39□□□□□ -1.55
CACUL1-205ENST00000490610 APOBP04114 4563 aaKnown RBP5.38□□□□□ -1.55
CACUL1-205ENST00000490610 A0A1B0GVX0 72 aa5.38□□□□□ -1.55
CACUL1-205ENST00000490610 WFDC13Q8IUB5 93 aa5.38□□□□□ -1.55
CACUL1-205ENST00000490610 KMT2CQ8NEZ4 4911 aaKnown RBP5.37□□□□□ -1.55
CACUL1-205ENST00000490610 KRTAP29-1A8MX34 341 aaPredicted RBP5.37□□□□□ -1.55
CACUL1-205ENST00000490610 SPINK1P00995 79 aa5.37□□□□□ -1.55
CACUL1-205ENST00000490610 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
CACUL1-205ENST00000490610 KRTAP10-4P60372 401 aaPredicted RBP5.36□□□□□ -1.55
CACUL1-205ENST00000490610 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
CACUL1-205ENST00000490610 SPAG11AQ6PDA7 123 aa5.36□□□□□ -1.55
CACUL1-205ENST00000490610 C20orf197Q8N268 126 aa5.36□□□□□ -1.55
CACUL1-205ENST00000490610 C8orf17Q9NRJ1 99 aa5.36□□□□□ -1.55
CACUL1-205ENST00000490610 hDV103S1A0JD37 113 aa5.35□□□□□ -1.55
CACUL1-205ENST00000490610 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
CACUL1-205ENST00000490610 IGHV6-1A0A0B4J1U7 121 aa5.34□□□□□ -1.55
CACUL1-205ENST00000490610 C8orf87E5RJ46 101 aa5.34□□□□□ -1.55
CACUL1-205ENST00000490610 NDUFC1O43677 76 aa5.34□□□□□ -1.55
CACUL1-205ENST00000490610 LINC00304Q8N9R0 145 aa5.34□□□□□ -1.55
CACUL1-205ENST00000490610 TMEM254Q8TBM7 123 aa5.34□□□□□ -1.55
CACUL1-205ENST00000490610 TMEM258P61165 79 aa5.33□□□□□ -1.56
CACUL1-205ENST00000490610 C5orf47Q569G3 176 aa5.33□□□□□ -1.56
CACUL1-205ENST00000490610 PRR26Q8N8Z3 221 aa5.33□□□□□ -1.56
CACUL1-205ENST00000490610 TP53AIP1Q9HCN2 124 aa5.32□□□□□ -1.56
CACUL1-205ENST00000490610 MP68P56378 58 aa5.31□□□□□ -1.56
CACUL1-205ENST00000490610 C1orf195Q5TG92 126 aa5.31□□□□□ -1.56
CACUL1-205ENST00000490610 PKHD1L1Q86WI1 4243 aa5.31□□□□□ -1.56
CACUL1-205ENST00000490610 A0A0U1RQV1 116 aa5.3□□□□□ -1.56
CACUL1-205ENST00000490610 H3BPC8 53 aa5.3□□□□□ -1.56
CACUL1-205ENST00000490610 Q5VSD8 79 aa5.3□□□□□ -1.56
CACUL1-205ENST00000490610 MRPL34Q9BQ48 92 aaKnown RBP5.3□□□□□ -1.56
CACUL1-205ENST00000490610 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
CACUL1-205ENST00000490610 KRTAP9-8Q9BYQ0 159 aa5.28□□□□□ -1.56
CACUL1-205ENST00000490610 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
CACUL1-205ENST00000490610 TRAV22A0A0B4J277 110 aa5.27□□□□□ -1.57
CACUL1-205ENST00000490610 H7BZZ5 65 aa5.27□□□□□ -1.57
CACUL1-205ENST00000490610 NDUFS5O43920 106 aa5.27□□□□□ -1.57
CACUL1-205ENST00000490610 ATP5EP56381 51 aaPredicted RBP5.27□□□□□ -1.57
CACUL1-205ENST00000490610 LINC00313P59037 77 aa5.27□□□□□ -1.57
CACUL1-205ENST00000490610 FAT1Q14517 4588 aa5.26□□□□□ -1.57
CACUL1-205ENST00000490610 H0Y9P7 68 aa5.26□□□□□ -1.57
CACUL1-205ENST00000490610 HSPG2P98160 4391 aa5.25□□□□□ -1.57
CACUL1-205ENST00000490610 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
CACUL1-205ENST00000490610 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
CACUL1-205ENST00000490610 NOTCH2NLQ7Z3S9 236 aa5.24□□□□□ -1.57
CACUL1-205ENST00000490610 ZCCHC13Q8WW36 166 aaKnown RBP5.24□□□□□ -1.57
CACUL1-205ENST00000490610 RYR3Q15413 4870 aa5.23□□□□□ -1.57
CACUL1-205ENST00000490610 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
CACUL1-205ENST00000490610 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
CACUL1-205ENST00000490610 C1orf64Q8NEQ6 169 aa5.2□□□□□ -1.58
CACUL1-205ENST00000490610 LOC101927531A0A1B0GV80 90 aa5.17□□□□□ -1.58
CACUL1-205ENST00000490610 KRTAP16-1A8MUX0 517 aa5.17□□□□□ -1.58
CACUL1-205ENST00000490610 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
CACUL1-205ENST00000490610 RPS28P62857 69 aaKnown RBP5.17□□□□□ -1.58
CACUL1-205ENST00000490610 RYR1P21817 5038 aa5.17□□□□□ -1.58
CACUL1-205ENST00000490610 SERP1Q9Y6X1 66 aa5.16□□□□□ -1.58
CACUL1-205ENST00000490610 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
CACUL1-205ENST00000490610 SPANXA2-OT1Q8N9U9 137 aa5.15□□□□□ -1.59
CACUL1-205ENST00000490610 KRTAP13-3Q3SY46 172 aa5.13□□□□□ -1.59
CACUL1-205ENST00000490610 FP248Q71RG6 208 aaPredicted RBP5.13□□□□□ -1.59
CACUL1-205ENST00000490610 TNXBP22105 4242 aa5.13□□□□□ -1.59
CACUL1-205ENST00000490610 OXTP01178 125 aa5.11□□□□□ -1.59
CACUL1-205ENST00000490610 Q5W150 140 aa5.11□□□□□ -1.59
CACUL1-205ENST00000490610 CYP4F30PQ9H0H9 118 aa5.11□□□□□ -1.59
CACUL1-205ENST00000490610 RETNLBQ9BQ08 111 aa5.1□□□□□ -1.59
CACUL1-205ENST00000490610 C20orf166-AS1Q96NR2 134 aa5.09□□□□□ -1.59
CACUL1-205ENST00000490610 C9orf92A6NGG3 77 aa5.08□□□□□ -1.6
CACUL1-205ENST00000490610 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
CACUL1-205ENST00000490610 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
CACUL1-205ENST00000490610 A8MUU9 505 aa5.07□□□□□ -1.6
CACUL1-205ENST00000490610 IGKV2-30P06310 120 aa5.07□□□□□ -1.6
CACUL1-205ENST00000490610 MT1HL1P0DM35 61 aa5.07□□□□□ -1.6
CACUL1-205ENST00000490610 FAT3Q8TDW7 4589 aa5.06□□□□□ -1.6
CACUL1-205ENST00000490610 DMBT1Q9UGM3 2413 aaPredicted RBP5.06□□□□□ -1.6
CACUL1-205ENST00000490610 KIAA1109Q2LD37 5005 aa5.06□□□□□ -1.6
CACUL1-205ENST00000490610 PRR4Q16378 134 aa5.05□□□□□ -1.6
CACUL1-205ENST00000490610 Q75L30 129 aa5.04□□□□□ -1.6
CACUL1-205ENST00000490610 EPPK1P58107 5090 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms