RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 IMUPQ9GZP8 106 aa7.8□□□□□ -1.16
SRGAP3-208ENST00000490348 ANAPC13Q9BS18 74 aa7.79□□□□□ -1.16
SRGAP3-208ENST00000490348 LINC00472Q9H8W2 130 aa7.79□□□□□ -1.16
SRGAP3-208ENST00000490348 LINC00643Q86TS7 51 aa7.77□□□□□ -1.17
SRGAP3-208ENST00000490348 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
SRGAP3-208ENST00000490348 SEC61BP60468 96 aaKnown RBP7.76□□□□□ -1.17
SRGAP3-208ENST00000490348 KRTAP4-1Q9BYQ7 146 aa7.76□□□□□ -1.17
SRGAP3-208ENST00000490348 FAT4Q6V0I7 4981 aa7.75□□□□□ -1.17
SRGAP3-208ENST00000490348 IGKV4-1P06312 121 aa7.74□□□□□ -1.17
SRGAP3-208ENST00000490348 PDE6GP18545 87 aa7.74□□□□□ -1.17
SRGAP3-208ENST00000490348 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.17
SRGAP3-208ENST00000490348 PCOTHQ58A44 107 aa7.71□□□□□ -1.18
SRGAP3-208ENST00000490348 A0A1B0GW54 56 aa7.7□□□□□ -1.18
SRGAP3-208ENST00000490348 DSCR10P59022 87 aa7.69□□□□□ -1.18
SRGAP3-208ENST00000490348 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
SRGAP3-208ENST00000490348 Q75L30 129 aa7.66□□□□□ -1.18
SRGAP3-208ENST00000490348 KRTAP16-1A8MUX0 517 aa7.64□□□□□ -1.19
SRGAP3-208ENST00000490348 C20orf166-AS1Q96NR2 134 aa7.64□□□□□ -1.19
SRGAP3-208ENST00000490348 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
SRGAP3-208ENST00000490348 LINC00313P59037 77 aa7.63□□□□□ -1.19
SRGAP3-208ENST00000490348 A0A1B0GVX0 72 aa7.63□□□□□ -1.19
SRGAP3-208ENST00000490348 A8MUU9 505 aa7.63□□□□□ -1.19
SRGAP3-208ENST00000490348 J3KT08 172 aa7.63□□□□□ -1.19
SRGAP3-208ENST00000490348 ATP5EP2Q5VTU8 51 aa7.63□□□□□ -1.19
SRGAP3-208ENST00000490348 FAM236AA0A1B0GUQ0 79 aa7.62□□□□□ -1.19
SRGAP3-208ENST00000490348 FAM236BA0A1B0GV22 79 aa7.62□□□□□ -1.19
SRGAP3-208ENST00000490348 NREPQ16612 68 aa7.61□□□□□ -1.19
SRGAP3-208ENST00000490348 IGKV3D-7A0A0C4DH55 119 aa7.59□□□□□ -1.2
SRGAP3-208ENST00000490348 A8MWP4 228 aa7.59□□□□□ -1.2
SRGAP3-208ENST00000490348 ATOX1O00244 68 aa7.59□□□□□ -1.2
SRGAP3-208ENST00000490348 HIST1H4AP62805 103 aaKnown RBP7.59□□□□□ -1.2
SRGAP3-208ENST00000490348 LINC00846Q9NV44 126 aa7.59□□□□□ -1.2
SRGAP3-208ENST00000490348 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
SRGAP3-208ENST00000490348 A0A0U1RQV1 116 aa7.56□□□□□ -1.2
SRGAP3-208ENST00000490348 C8orf87E5RJ46 101 aa7.56□□□□□ -1.2
SRGAP3-208ENST00000490348 ATP11AUNQ6ZP68 121 aa7.56□□□□□ -1.2
SRGAP3-208ENST00000490348 UQCRQO14949 82 aa7.55□□□□□ -1.2
SRGAP3-208ENST00000490348 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
SRGAP3-208ENST00000490348 Q6ZVQ6 151 aa7.54□□□□□ -1.2
SRGAP3-208ENST00000490348 NDUFB1O75438 58 aa7.54□□□□□ -1.2
SRGAP3-208ENST00000490348 UBL5Q9BZL1 73 aa7.54□□□□□ -1.2
SRGAP3-208ENST00000490348 PRR15Q8IV56 129 aa7.53□□□□□ -1.2
SRGAP3-208ENST00000490348 C8orf17Q9NRJ1 99 aa7.52□□□□□ -1.21
SRGAP3-208ENST00000490348 K7EQZ3 153 aa7.51□□□□□ -1.21
SRGAP3-208ENST00000490348 COX7CP15954 63 aa7.51□□□□□ -1.21
SRGAP3-208ENST00000490348 LCE2AQ5TA79 106 aaPredicted RBP7.51□□□□□ -1.21
SRGAP3-208ENST00000490348 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
SRGAP3-208ENST00000490348 BPY2O14599 106 aa7.5□□□□□ -1.21
SRGAP3-208ENST00000490348 MMP24-AS1A0A0U1RRL7 71 aa7.47□□□□□ -1.21
SRGAP3-208ENST00000490348 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
SRGAP3-208ENST00000490348 SERP2Q8N6R1 65 aa7.46□□□□□ -1.21
SRGAP3-208ENST00000490348 Q8N9L7 120 aa7.46□□□□□ -1.21
SRGAP3-208ENST00000490348 FLGP20930 4061 aaPredicted RBP7.45□□□□□ -1.22
SRGAP3-208ENST00000490348 CXCL6P80162 114 aa7.44□□□□□ -1.22
SRGAP3-208ENST00000490348 SMIM20Q8N5G0 67 aa7.42□□□□□ -1.22
SRGAP3-208ENST00000490348 A0A087WVE0 104 aa7.41□□□□□ -1.22
SRGAP3-208ENST00000490348 TMEM254Q8TBM7 123 aa7.41□□□□□ -1.22
SRGAP3-208ENST00000490348 ZCCHC13Q8WW36 166 aaKnown RBP7.41□□□□□ -1.22
SRGAP3-208ENST00000490348 hDV103S1A0JD37 113 aa7.4□□□□□ -1.22
SRGAP3-208ENST00000490348 MRPL34Q9BQ48 92 aaKnown RBP7.39□□□□□ -1.23
SRGAP3-208ENST00000490348 TMEM258P61165 79 aa7.37□□□□□ -1.23
SRGAP3-208ENST00000490348 MT1HP80294 61 aa7.37□□□□□ -1.23
SRGAP3-208ENST00000490348 WFDC13Q8IUB5 93 aa7.35□□□□□ -1.23
SRGAP3-208ENST00000490348 TRAV7A0A075B6U4 112 aa7.34□□□□□ -1.23
SRGAP3-208ENST00000490348 CASC2Q6XLA1 102 aa7.33□□□□□ -1.24
SRGAP3-208ENST00000490348 HRES1P13985 223 aa7.33□□□□□ -1.24
SRGAP3-208ENST00000490348 COX6B2Q6YFQ2 88 aa7.32□□□□□ -1.24
SRGAP3-208ENST00000490348 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-208ENST00000490348 MPLKIPQ8TAP9 179 aa7.31□□□□□ -1.24
SRGAP3-208ENST00000490348 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
SRGAP3-208ENST00000490348 NDUFS5O43920 106 aa7.3□□□□□ -1.24
SRGAP3-208ENST00000490348 SPINK7P58062 85 aa7.29□□□□□ -1.24
SRGAP3-208ENST00000490348 Q5W150 140 aa7.28□□□□□ -1.24
SRGAP3-208ENST00000490348 KLKP1Q107X0 134 aa7.25□□□□□ -1.25
SRGAP3-208ENST00000490348 NDUFC1O43677 76 aa7.24□□□□□ -1.25
SRGAP3-208ENST00000490348 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
SRGAP3-208ENST00000490348 CYSTM1Q9H1C7 97 aa7.23□□□□□ -1.25
SRGAP3-208ENST00000490348 RBM12B-AS1Q9P1G2 102 aa7.2□□□□□ -1.26
SRGAP3-208ENST00000490348 FAM236DA0A1B0GTK5 79 aa7.18□□□□□ -1.26
SRGAP3-208ENST00000490348 FAM236CP0DP71 79 aa7.18□□□□□ -1.26
SRGAP3-208ENST00000490348 ATP5EP56381 51 aaPredicted RBP7.18□□□□□ -1.26
SRGAP3-208ENST00000490348 M0R2T5 61 aa7.17□□□□□ -1.26
SRGAP3-208ENST00000490348 LORP23490 312 aaPredicted RBP7.17□□□□□ -1.26
SRGAP3-208ENST00000490348 KRTAP10-6P60371 365 aaPredicted RBP7.17□□□□□ -1.26
SRGAP3-208ENST00000490348 H7BZZ5 65 aa7.16□□□□□ -1.26
SRGAP3-208ENST00000490348 IGKV2D-30A0A075B6S6 120 aa7.16□□□□□ -1.26
SRGAP3-208ENST00000490348 IGKV2-30P06310 120 aa7.16□□□□□ -1.26
SRGAP3-208ENST00000490348 OCR1Q9BZK8 76 aa7.15□□□□□ -1.27
SRGAP3-208ENST00000490348 C7orf65Q6ZTY9 151 aa7.13□□□□□ -1.27
SRGAP3-208ENST00000490348 SERP1Q9Y6X1 66 aa7.13□□□□□ -1.27
SRGAP3-208ENST00000490348 TP53AIP1Q9HCN2 124 aa7.12□□□□□ -1.27
SRGAP3-208ENST00000490348 SNURFQ9Y675 71 aa7.1□□□□□ -1.27
SRGAP3-208ENST00000490348 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
SRGAP3-208ENST00000490348 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
SRGAP3-208ENST00000490348 KRTAP9-2Q9BYQ4 174 aa7.07□□□□□ -1.28
SRGAP3-208ENST00000490348 C4orf26Q17RF5 130 aa7.03□□□□□ -1.28
SRGAP3-208ENST00000490348 C5orf47Q569G3 176 aa7.03□□□□□ -1.28
SRGAP3-208ENST00000490348 KRTAP9-8Q9BYQ0 159 aa7.03□□□□□ -1.28
SRGAP3-208ENST00000490348 TRAV22A0A0B4J277 110 aa7.02□□□□□ -1.29
SRGAP3-208ENST00000490348 SMIM26A0A096LP01 95 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms