RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 TNCP24821 2201 aa1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 ZNF469Q96JG9 3925 aaPredicted RBP1.31□□□□□ -2.2
TM9SF3-206ENST00000490192 ZFYVE26Q68DK2 2539 aa1.3□□□□□ -2.2
TM9SF3-206ENST00000490192 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
TM9SF3-206ENST00000490192 H0Y9P7 68 aa1.3□□□□□ -2.2
TM9SF3-206ENST00000490192 WFDC2Q14508 124 aa1.3□□□□□ -2.2
TM9SF3-206ENST00000490192 SMR3AQ99954 134 aa1.3□□□□□ -2.2
TM9SF3-206ENST00000490192 ACACAQ13085 2346 aa1.3□□□□□ -2.2
TM9SF3-206ENST00000490192 URB1O60287 2271 aaKnown RBP1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 TENM4Q6N022 2769 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 ANK3Q12955 4377 aaKnown RBP1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 HTN1P15515 57 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 MUSTN1Q8IVN3 82 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 CDKN2A-AS1Q9UH64 79 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 NAV2Q8IVL1 2488 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 POLQO75417 2590 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 SPTBN4Q9H254 2564 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 UTP20O75691 2785 aaKnown RBP1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 LRBAP50851 2863 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 CELSR1Q9NYQ6 3014 aa1.29□□□□□ -2.2
TM9SF3-206ENST00000490192 LRRK2Q5S007 2527 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 UNC79Q9P2D8 2635 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 PDZD2O15018 2839 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 NDUFA1O15239 70 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 NOP10Q9NPE3 64 aaKnown RBP1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 F8P00451 2351 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 ACACBO00763 2458 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 USP9YO00507 2555 aaPredicted RBP1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 COL12A1Q99715 3063 aa1.28□□□□□ -2.2
TM9SF3-206ENST00000490192 CSMD2Q7Z408 3487 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 MYO18BQ8IUG5 2567 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 PTPN13Q12923 2485 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 HIVEP3Q5T1R4 2406 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 SPG11Q96JI7 2443 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 TPRP12270 2363 aaKnown RBP1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 LINC00959A0A1B0GUT2 108 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 LINC00308Q8TCZ7 52 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 CENPEQ02224 2701 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 EPG5Q9HCE0 2579 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 CSMD1Q96PZ7 3565 aa1.27□□□□□ -2.21
TM9SF3-206ENST00000490192 TACC2O95359 2948 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 NBASA2RRP1 2371 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 TRBV7-4A0A0J9YYF1 115 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 DEFB121Q5J5C9 76 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 WFDC9Q8NEX5 89 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 APCP25054 2843 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 ITPR3Q14573 2671 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 ABCA12Q86UK0 2595 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 CELSR2Q9HCU4 2923 aa1.26□□□□□ -2.21
TM9SF3-206ENST00000490192 ZANQ9Y493 2812 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 CHD6Q8TD26 2715 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 FRAS1Q86XX4 4008 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 OTOGQ6ZRI0 2925 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 A0A1B0GU69 56 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 DEFB130BP0DP73 79 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 DEFB130AP0DP74 79 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 ATXN8Q156A1 80 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 SPINK6Q6UWN8 80 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 Q8IZM0 81 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 KRTAP2-1Q9BYU5 128 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 CRYBG3Q68DQ2 2970 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 CREBBPQ92793 2442 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 MXRA5Q9NR99 2828 aa1.25□□□□□ -2.21
TM9SF3-206ENST00000490192 AKAP6Q13023 2319 aa1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 PCNX1Q96RV3 2341 aa1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 SETXQ7Z333 2677 aaKnown RBP1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 SPTAN1Q13813 2472 aaKnown RBP1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 A0A096LPF7 62 aa1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 DEFB4AO15263 64 aa1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 DEFB135Q30KP9 77 aa1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 VPS13CQ709C8 3753 aa1.24□□□□□ -2.21
TM9SF3-206ENST00000490192 NIPBLQ6KC79 2804 aaeCLIP1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 AKAP9Q99996 3911 aa1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 LELP1Q5T871 98 aa1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 CLPSL2Q6UWE3 100 aa1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 ENHOQ6UWT2 76 aa1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 TOMM7Q9P0U1 55 aa1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 FLNAP21333 2647 aaKnown RBP1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.23□□□□□ -2.21
TM9SF3-206ENST00000490192 C2CD3Q4AC94 2353 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 HECTD1Q9ULT8 2610 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 FASNP49327 2511 aaKnown RBP1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 CCDC168Q8NDH2 2452 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 H3BNG1 76 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 SPART-AS1P0CW21 52 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 LINC00158P58513 81 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 WFDC10BQ8IUB3 73 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 C6orf48Q9UBA6 75 aa1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 SPTBN1Q01082 2364 aaKnown RBP1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 GCN1Q92616 2671 aaKnown RBP1.22□□□□□ -2.21
TM9SF3-206ENST00000490192 ANKRD17O75179 2603 aaKnown RBP1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 CUBNO60494 3623 aa1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 DOPEY2Q9Y3R5 2298 aa1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 H0YGX0 51 aa1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 HTN3P15516 51 aa1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 LINC00643Q86TS7 51 aa1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 TEX15Q9BXT5 2789 aa1.21□□□□□ -2.22
TM9SF3-206ENST00000490192 MYO9AB2RTY4 2548 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms