RNA–Protein interactions for RNA: ENST00000490111.1

RTN1-207, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-207ENST00000490111 ETDBQ3ZM63 59 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 C1orf137Q5JT78 98 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 BVES-AS1Q5T3Y7 98 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 GNG13Q9P2W3 67 aa2.42□□□□□ -2.02
RTN1-207ENST00000490111 LINC00959A0A1B0GUT2 108 aa2.41□□□□□ -2.02
RTN1-207ENST00000490111 KRTAP10-6P60371 365 aaPredicted RBP2.41□□□□□ -2.02
RTN1-207ENST00000490111 CSAG1Q6PB30 78 aa2.41□□□□□ -2.02
RTN1-207ENST00000490111 IFI27L1Q96BM0 104 aa2.41□□□□□ -2.02
RTN1-207ENST00000490111 NXT2Q9NPJ8 142 aaKnown RBP2.41□□□□□ -2.02
RTN1-207ENST00000490111 FCGBPQ9Y6R7 5405 aaPredicted RBP2.41□□□□□ -2.02
RTN1-207ENST00000490111 Q8N9L7 120 aa2.4□□□□□ -2.03
RTN1-207ENST00000490111 PRO0461Q9UI25 63 aa2.4□□□□□ -2.03
RTN1-207ENST00000490111 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
RTN1-207ENST00000490111 SDHAF1A6NFY7 115 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 H7BZZ5 65 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 KRTAP1-4P0C5Y4 121 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 MT1HP80294 61 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 TPRXLQ17RH7 258 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 TIMM21Q9BVV7 248 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 KRTAP9-3Q9BYQ3 159 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 ANAPC11Q9NYG5 84 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 HIGD1BQ9P298 99 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 USH2AO75445 5202 aa2.39□□□□□ -2.03
RTN1-207ENST00000490111 A0A0G2JQZ4 141 aa2.38□□□□□ -2.03
RTN1-207ENST00000490111 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
RTN1-207ENST00000490111 KRTAP19-1Q8IUB9 90 aa2.38□□□□□ -2.03
RTN1-207ENST00000490111 KRTAP4-1Q9BYQ7 146 aa2.38□□□□□ -2.03
RTN1-207ENST00000490111 CDC42SE2Q9NRR3 84 aa2.38□□□□□ -2.03
RTN1-207ENST00000490111 MACF1Q9UPN3 7388 aaKnown RBP2.38□□□□□ -2.03
RTN1-207ENST00000490111 F2Z2F3 143 aa2.37□□□□□ -2.03
RTN1-207ENST00000490111 UBE2D1P51668 147 aa2.37□□□□□ -2.03
RTN1-207ENST00000490111 SPAG11BQ08648 103 aa2.37□□□□□ -2.03
RTN1-207ENST00000490111 UNQ6190/PRO20217Q6UXQ8 127 aa2.37□□□□□ -2.03
RTN1-207ENST00000490111 TRAV22A0A0B4J277 110 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 TEX49A0A1B0GTD5 131 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 A8MU10 97 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 I3L3M4 83 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 RPL39P62891 51 aaKnown RBP2.36□□□□□ -2.03
RTN1-207ENST00000490111 Q5VV11 94 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 MANBALQ9NQG1 85 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 ORMDL1Q9P0S3 153 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 C6orf48Q9UBA6 75 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 UBE2D4Q9Y2X8 147 aa2.36□□□□□ -2.03
RTN1-207ENST00000490111 TRAV23DV6A0A075B6W5 121 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 KANTRA0A1W2PQU2 76 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 C7orf77A4D0Y5 90 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 UMAD1C9J7I0 102 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 H3BUT2 72 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 BCE1O60756 84 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 POLR2KP53803 58 aaKnown RBP2.35□□□□□ -2.03
RTN1-207ENST00000490111 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 C18orf32Q8TCD1 76 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 DMAC1Q96GE9 116 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 PRO1854Q9UHT4 67 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 NEBP20929 6669 aa2.35□□□□□ -2.03
RTN1-207ENST00000490111 TRBV6-5A0A0K0K1A5 114 aa2.34□□□□□ -2.03
RTN1-207ENST00000490111 MT3P25713 68 aa2.34□□□□□ -2.03
RTN1-207ENST00000490111 FCER1GP30273 86 aa2.34□□□□□ -2.03
RTN1-207ENST00000490111 KLKP1Q107X0 134 aa2.34□□□□□ -2.03
RTN1-207ENST00000490111 SPATA45Q537H7 98 aa2.34□□□□□ -2.03
RTN1-207ENST00000490111 HIGD1CA8MV81 97 aa2.33□□□□□ -2.04
RTN1-207ENST00000490111 M0R2T5 61 aa2.33□□□□□ -2.04
RTN1-207ENST00000490111 KRTAP19-2Q3LHN2 52 aa2.33□□□□□ -2.04
RTN1-207ENST00000490111 KRTAP13-2Q52LG2 175 aa2.33□□□□□ -2.04
RTN1-207ENST00000490111 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
RTN1-207ENST00000490111 CHKB-CPT1BH3BT56 60 aa2.32□□□□□ -2.04
RTN1-207ENST00000490111 NDUFA1O15239 70 aa2.32□□□□□ -2.04
RTN1-207ENST00000490111 A0A1B0GUT8 65 aa2.31□□□□□ -2.04
RTN1-207ENST00000490111 ACYP1P07311 99 aa2.31□□□□□ -2.04
RTN1-207ENST00000490111 PMCHL1Q16048 86 aa2.31□□□□□ -2.04
RTN1-207ENST00000490111 TOMM7Q9P0U1 55 aa2.31□□□□□ -2.04
RTN1-207ENST00000490111 V9GYV3 84 aa2.31□□□□□ -2.04
RTN1-207ENST00000490111 D6R8Y8 96 aa2.3□□□□□ -2.04
RTN1-207ENST00000490111 COX6CP09669 75 aa2.3□□□□□ -2.04
RTN1-207ENST00000490111 LINC00643Q86TS7 51 aa2.3□□□□□ -2.04
RTN1-207ENST00000490111 PDE6GP18545 87 aa2.29□□□□□ -2.04
RTN1-207ENST00000490111 PRLHP81277 87 aa2.29□□□□□ -2.04
RTN1-207ENST00000490111 SFTA2Q6UW10 78 aa2.29□□□□□ -2.04
RTN1-207ENST00000490111 SMIM2Q9BVW6 85 aa2.29□□□□□ -2.04
RTN1-207ENST00000490111 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
RTN1-207ENST00000490111 IGKV2-28A0A075B6P5 120 aa2.28□□□□□ -2.04
RTN1-207ENST00000490111 LOC101927531A0A1B0GV80 90 aa2.28□□□□□ -2.04
RTN1-207ENST00000490111 IGKV2D-28P01615 120 aa2.28□□□□□ -2.04
RTN1-207ENST00000490111 ELOF1P60002 83 aaKnown RBP2.28□□□□□ -2.04
RTN1-207ENST00000490111 LINC00846Q9NV44 126 aa2.28□□□□□ -2.04
RTN1-207ENST00000490111 TRBV30A0A0K0K1B3 111 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 IGLV6-57P01721 117 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 TMEM170BQ5T4T1 132 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 KRTAP13-1Q8IUC0 172 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 C20orf197Q8N268 126 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 LINC00304Q8N9R0 145 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 CDKN2A-AS1Q9UH64 79 aa2.27□□□□□ -2.05
RTN1-207ENST00000490111 SMIM27A0A1W2PRY6 76 aa2.26□□□□□ -2.05
RTN1-207ENST00000490111 JMJD7-PLA2G4BH0Y9G9 81 aa2.26□□□□□ -2.05
RTN1-207ENST00000490111 SMIM13P0DJ93 91 aa2.26□□□□□ -2.05
RTN1-207ENST00000490111 IFI27P40305 119 aaPredicted RBP2.26□□□□□ -2.05
RTN1-207ENST00000490111 KRTAP13-3Q3SY46 172 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms