RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 BAALC-AS2P0C853 105 aa6.03□□□□□ -1.44
SEMA6C-208ENST00000489944 NDUFB1O75438 58 aa6.02□□□□□ -1.45
SEMA6C-208ENST00000489944 MTURNQ8N3F0 131 aa6.02□□□□□ -1.45
SEMA6C-208ENST00000489944 A0A1B0GV72 72 aa6.01□□□□□ -1.45
SEMA6C-208ENST00000489944 ATXN8Q156A1 80 aa6.01□□□□□ -1.45
SEMA6C-208ENST00000489944 LYRM7Q5U5X0 104 aa6.01□□□□□ -1.45
SEMA6C-208ENST00000489944 Q6ZQT0 140 aa6.01□□□□□ -1.45
SEMA6C-208ENST00000489944 MPLKIPQ8TAP9 179 aa6.01□□□□□ -1.45
SEMA6C-208ENST00000489944 VPS25Q9BRG1 176 aa6.01□□□□□ -1.45
SEMA6C-208ENST00000489944 FAM236DA0A1B0GTK5 79 aa6□□□□□ -1.45
SEMA6C-208ENST00000489944 FAM236CP0DP71 79 aa6□□□□□ -1.45
SEMA6C-208ENST00000489944 LOC110117498A0A087WWA1 95 aa5.99□□□□□ -1.45
SEMA6C-208ENST00000489944 DEFB116Q30KQ4 102 aa5.99□□□□□ -1.45
SEMA6C-208ENST00000489944 NOTCH2NLQ7Z3S9 236 aa5.98□□□□□ -1.45
SEMA6C-208ENST00000489944 TMA7Q9Y2S6 64 aaKnown RBP5.98□□□□□ -1.45
SEMA6C-208ENST00000489944 HRES1P13985 223 aa5.97□□□□□ -1.45
SEMA6C-208ENST00000489944 Q8N9P0 234 aaPredicted RBP5.97□□□□□ -1.45
SEMA6C-208ENST00000489944 ZCCHC13Q8WW36 166 aaKnown RBP5.97□□□□□ -1.45
SEMA6C-208ENST00000489944 KRTAP9-8Q9BYQ0 159 aa5.96□□□□□ -1.46
SEMA6C-208ENST00000489944 A8MWP4 228 aa5.95□□□□□ -1.46
SEMA6C-208ENST00000489944 SMIM6P0DI80 62 aa5.94□□□□□ -1.46
SEMA6C-208ENST00000489944 SPINK7P58062 85 aa5.9□□□□□ -1.46
SEMA6C-208ENST00000489944 C8orf17Q9NRJ1 99 aa5.9□□□□□ -1.46
SEMA6C-208ENST00000489944 TSTD3H0UI37 97 aa5.89□□□□□ -1.47
SEMA6C-208ENST00000489944 NREPQ16612 68 aa5.89□□□□□ -1.47
SEMA6C-208ENST00000489944 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
SEMA6C-208ENST00000489944 IGKV3D-7A0A0C4DH55 119 aa5.87□□□□□ -1.47
SEMA6C-208ENST00000489944 Q6ZVQ6 151 aa5.87□□□□□ -1.47
SEMA6C-208ENST00000489944 H3BT86 120 aa5.86□□□□□ -1.47
SEMA6C-208ENST00000489944 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
SEMA6C-208ENST00000489944 MT2AP02795 61 aa5.85□□□□□ -1.47
SEMA6C-208ENST00000489944 TMEM254Q8TBM7 123 aa5.85□□□□□ -1.47
SEMA6C-208ENST00000489944 WFDC13Q8IUB5 93 aa5.84□□□□□ -1.47
SEMA6C-208ENST00000489944 MRPL34Q9BQ48 92 aaKnown RBP5.83□□□□□ -1.48
SEMA6C-208ENST00000489944 NAA38Q9BRA0 125 aaKnown RBP5.83□□□□□ -1.48
SEMA6C-208ENST00000489944 C9orf118A6NHY6 69 aa5.81□□□□□ -1.48
SEMA6C-208ENST00000489944 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
SEMA6C-208ENST00000489944 MMP24-AS1A0A0U1RRL7 71 aa5.79□□□□□ -1.48
SEMA6C-208ENST00000489944 hDV103S1A0JD37 113 aa5.79□□□□□ -1.48
SEMA6C-208ENST00000489944 MT1FP04733 61 aa5.79□□□□□ -1.48
SEMA6C-208ENST00000489944 USH2AO75445 5202 aa5.79□□□□□ -1.48
SEMA6C-208ENST00000489944 A0A1W2PPM0 123 aa5.78□□□□□ -1.48
SEMA6C-208ENST00000489944 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
SEMA6C-208ENST00000489944 LINC00846Q9NV44 126 aa5.78□□□□□ -1.48
SEMA6C-208ENST00000489944 BPY2O14599 106 aa5.77□□□□□ -1.49
SEMA6C-208ENST00000489944 BATFQ16520 125 aa5.76□□□□□ -1.49
SEMA6C-208ENST00000489944 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
SEMA6C-208ENST00000489944 K7EQZ3 153 aa5.74□□□□□ -1.49
SEMA6C-208ENST00000489944 TAX1BP3O14907 124 aa5.74□□□□□ -1.49
SEMA6C-208ENST00000489944 NDUFS5O43920 106 aa5.73□□□□□ -1.49
SEMA6C-208ENST00000489944 H1FX-AS1Q4G0G2 97 aa5.73□□□□□ -1.49
SEMA6C-208ENST00000489944 C7orf65Q6ZTY9 151 aa5.73□□□□□ -1.49
SEMA6C-208ENST00000489944 LCE2BO14633 110 aa5.72□□□□□ -1.49
SEMA6C-208ENST00000489944 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
SEMA6C-208ENST00000489944 CXCL6P80162 114 aa5.7□□□□□ -1.5
SEMA6C-208ENST00000489944 CASC2Q6XLA1 102 aa5.69□□□□□ -1.5
SEMA6C-208ENST00000489944 KRTAP9-7A8MTY7 169 aa5.68□□□□□ -1.5
SEMA6C-208ENST00000489944 UBL5Q9BZL1 73 aa5.68□□□□□ -1.5
SEMA6C-208ENST00000489944 SPCS1Q9Y6A9 102 aa5.68□□□□□ -1.5
SEMA6C-208ENST00000489944 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
SEMA6C-208ENST00000489944 FCGBPQ9Y6R7 5405 aaPredicted RBP5.66□□□□□ -1.5
SEMA6C-208ENST00000489944 LOC105371267A0A1B0GV96 52 aa5.65□□□□□ -1.5
SEMA6C-208ENST00000489944 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
SEMA6C-208ENST00000489944 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
SEMA6C-208ENST00000489944 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
SEMA6C-208ENST00000489944 MACF1Q9UPN3 7388 aaKnown RBP5.64□□□□□ -1.51
SEMA6C-208ENST00000489944 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
SEMA6C-208ENST00000489944 Q5W150 140 aa5.63□□□□□ -1.51
SEMA6C-208ENST00000489944 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
SEMA6C-208ENST00000489944 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
SEMA6C-208ENST00000489944 SMCPP49901 116 aaPredicted RBP5.59□□□□□ -1.51
SEMA6C-208ENST00000489944 Q8N9L7 120 aa5.59□□□□□ -1.51
SEMA6C-208ENST00000489944 K7EP34 96 aa5.58□□□□□ -1.52
SEMA6C-208ENST00000489944 PRO0461Q9UI25 63 aa5.58□□□□□ -1.52
SEMA6C-208ENST00000489944 GTF2H5Q6ZYL4 71 aa5.56□□□□□ -1.52
SEMA6C-208ENST00000489944 F8W1H4 67 aa5.55□□□□□ -1.52
SEMA6C-208ENST00000489944 C4orf26Q17RF5 130 aa5.55□□□□□ -1.52
SEMA6C-208ENST00000489944 SYNE2Q8WXH0 6885 aaKnown RBP5.52□□□□□ -1.53
SEMA6C-208ENST00000489944 CSAG1Q6PB30 78 aa5.51□□□□□ -1.53
SEMA6C-208ENST00000489944 C1orf64Q8NEQ6 169 aa5.49□□□□□ -1.53
SEMA6C-208ENST00000489944 S4R3F8 94 aa5.49□□□□□ -1.53
SEMA6C-208ENST00000489944 ACYP1P07311 99 aa5.47□□□□□ -1.53
SEMA6C-208ENST00000489944 C5orf47Q569G3 176 aa5.45□□□□□ -1.54
SEMA6C-208ENST00000489944 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
SEMA6C-208ENST00000489944 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
SEMA6C-208ENST00000489944 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
SEMA6C-208ENST00000489944 ETDBQ3ZM63 59 aa5.44□□□□□ -1.54
SEMA6C-208ENST00000489944 ATP5EP2Q5VTU8 51 aa5.43□□□□□ -1.54
SEMA6C-208ENST00000489944 LOC101927531A0A1B0GV80 90 aa5.42□□□□□ -1.54
SEMA6C-208ENST00000489944 LCA10Q71F78 164 aa5.42□□□□□ -1.54
SEMA6C-208ENST00000489944 TRAV22A0A0B4J277 110 aa5.41□□□□□ -1.54
SEMA6C-208ENST00000489944 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
SEMA6C-208ENST00000489944 SPRR2GQ9BYE4 73 aa5.41□□□□□ -1.54
SEMA6C-208ENST00000489944 CYP4F30PQ9H0H9 118 aa5.41□□□□□ -1.54
SEMA6C-208ENST00000489944 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
SEMA6C-208ENST00000489944 ATOX1O00244 68 aa5.39□□□□□ -1.55
SEMA6C-208ENST00000489944 Q5VV11 94 aa5.39□□□□□ -1.55
SEMA6C-208ENST00000489944 CRIPTQ9P021 101 aa5.39□□□□□ -1.55
SEMA6C-208ENST00000489944 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
SEMA6C-208ENST00000489944 KLKP1Q107X0 134 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms