RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 H0Y9P7 68 aa15.4■□□□□ 0.06
KCNC4-207ENST00000489935 LINC00208Q96KT6 92 aa15.38■□□□□ 0.05
KCNC4-207ENST00000489935 A0A1B0GVY2 172 aa15.35■□□□□ 0.05
KCNC4-207ENST00000489935 TRAV22A0A0B4J277 110 aa15.31■□□□□ 0.04
KCNC4-207ENST00000489935 DYNC1H1Q14204 4646 aaKnown RBP15.31■□□□□ 0.04
KCNC4-207ENST00000489935 H3BPC8 53 aa15.3■□□□□ 0.04
KCNC4-207ENST00000489935 MRPL34Q9BQ48 92 aaKnown RBP15.29■□□□□ 0.04
KCNC4-207ENST00000489935 PLA2G1BP04054 148 aaKnown RBP15.28■□□□□ 0.04
KCNC4-207ENST00000489935 TP53AIP1Q9HCN2 124 aa15.28■□□□□ 0.04
KCNC4-207ENST00000489935 Q5XG85 94 aa15.25■□□□□ 0.03
KCNC4-207ENST00000489935 C1orf64Q8NEQ6 169 aa15.25■□□□□ 0.03
KCNC4-207ENST00000489935 NDUFS5O43920 106 aa15.24■□□□□ 0.03
KCNC4-207ENST00000489935 RYR2Q92736 4967 aa15.24■□□□□ 0.03
KCNC4-207ENST00000489935 SMR3BP02814 79 aaPredicted RBP15.24■□□□□ 0.03
KCNC4-207ENST00000489935 C1orf195Q5TG92 126 aa15.24■□□□□ 0.03
KCNC4-207ENST00000489935 TYMSOSQ8TAI1 123 aa15.18■□□□□ 0.02
KCNC4-207ENST00000489935 PRR4Q16378 134 aa15.17■□□□□ 0.02
KCNC4-207ENST00000489935 APOBP04114 4563 aaKnown RBP15.13■□□□□ 0.01
KCNC4-207ENST00000489935 C8orf87E5RJ46 101 aa15.13■□□□□ 0.01
KCNC4-207ENST00000489935 KMT2CQ8NEZ4 4911 aaKnown RBP15.13■□□□□ 0.01
KCNC4-207ENST00000489935 CYP4F30PQ9H0H9 118 aa15.13■□□□□ 0.01
KCNC4-207ENST00000489935 SMIM26A0A096LP01 95 aa15.12■□□□□ 0.01
KCNC4-207ENST00000489935 LIMD2Q9BT23 127 aa15.11■□□□□ 0.01
KCNC4-207ENST00000489935 C4orf48Q5BLP8 95 aa15.1■□□□□ 0.01
KCNC4-207ENST00000489935 FP248Q71RG6 208 aaPredicted RBP15.1■□□□□ 0.01
KCNC4-207ENST00000489935 LINC00313P59037 77 aa15.09■□□□□ 0.01
KCNC4-207ENST00000489935 PRR26Q8N8Z3 221 aa15.09■□□□□ 0.01
KCNC4-207ENST00000489935 KRTAP10-4P60372 401 aaPredicted RBP15.07■□□□□ 0
KCNC4-207ENST00000489935 C4orf26Q17RF5 130 aa15.07■□□□□ 0
KCNC4-207ENST00000489935 SPANXA2-OT1Q8N9U9 137 aa15.07■□□□□ 0
KCNC4-207ENST00000489935 Q5W150 140 aa15.05■□□□□ 0
KCNC4-207ENST00000489935 SPINK1P00995 79 aa15.05■□□□□ -0
KCNC4-207ENST00000489935 FAT1Q14517 4588 aa15.03■□□□□ -0
KCNC4-207ENST00000489935 KRTAP13-3Q3SY46 172 aa15.02□□□□□ -0.01
KCNC4-207ENST00000489935 PCOTHQ58A44 107 aa15.02□□□□□ -0.01
KCNC4-207ENST00000489935 LINC00304Q8N9R0 145 aa14.97□□□□□ -0.01
KCNC4-207ENST00000489935 KRTAP16-1A8MUX0 517 aa14.96□□□□□ -0.01
KCNC4-207ENST00000489935 Q8N9P0 234 aaPredicted RBP14.96□□□□□ -0.01
KCNC4-207ENST00000489935 IGLV7-46A0A075B6I9 117 aa14.94□□□□□ -0.02
KCNC4-207ENST00000489935 LOC101927531A0A1B0GV80 90 aa14.89□□□□□ -0.03
KCNC4-207ENST00000489935 RPS29P62273 56 aaKnown RBP14.89□□□□□ -0.03
KCNC4-207ENST00000489935 SPAG11AQ6PDA7 123 aa14.88□□□□□ -0.03
KCNC4-207ENST00000489935 MPLKIPQ8TAP9 179 aa14.88□□□□□ -0.03
KCNC4-207ENST00000489935 PKHD1L1Q86WI1 4243 aa14.86□□□□□ -0.03
KCNC4-207ENST00000489935 RETNLBQ9BQ08 111 aa14.84□□□□□ -0.03
KCNC4-207ENST00000489935 FAM229AH3BQW9 127 aa14.82□□□□□ -0.04
KCNC4-207ENST00000489935 COA5Q86WW8 74 aa14.72□□□□□ -0.05
KCNC4-207ENST00000489935 RYR3Q15413 4870 aa14.71□□□□□ -0.05
KCNC4-207ENST00000489935 Q1T7F1 81 aa14.71□□□□□ -0.06
KCNC4-207ENST00000489935 SVIPQ8NHG7 77 aa14.69□□□□□ -0.06
KCNC4-207ENST00000489935 IGKV2-30P06310 120 aa14.68□□□□□ -0.06
KCNC4-207ENST00000489935 HSPG2P98160 4391 aa14.63□□□□□ -0.07
KCNC4-207ENST00000489935 HRES1P13985 223 aa14.62□□□□□ -0.07
KCNC4-207ENST00000489935 Q5VSD8 79 aa14.57□□□□□ -0.08
KCNC4-207ENST00000489935 C9orf92A6NGG3 77 aa14.54□□□□□ -0.08
KCNC4-207ENST00000489935 IGKV2D-30A0A075B6S6 120 aa14.53□□□□□ -0.08
KCNC4-207ENST00000489935 FLG2Q5D862 2391 aaPredicted RBP14.52□□□□□ -0.08
KCNC4-207ENST00000489935 PSPHP1O15172 72 aa14.51□□□□□ -0.09
KCNC4-207ENST00000489935 Q8N1X5 172 aa14.51□□□□□ -0.09
KCNC4-207ENST00000489935 KRTAP17-1Q9BYP8 105 aa14.51□□□□□ -0.09
KCNC4-207ENST00000489935 TNXBP22105 4242 aa14.5□□□□□ -0.09
KCNC4-207ENST00000489935 LRP1Q07954 4544 aaKnown RBP14.5□□□□□ -0.09
KCNC4-207ENST00000489935 V9GYY9 64 aa14.49□□□□□ -0.09
KCNC4-207ENST00000489935 RYR1P21817 5038 aa14.48□□□□□ -0.09
KCNC4-207ENST00000489935 KRTAP10-8P60410 259 aa14.47□□□□□ -0.09
KCNC4-207ENST00000489935 DMAC1Q96GE9 116 aa14.46□□□□□ -0.09
KCNC4-207ENST00000489935 ACYP2P14621 99 aa14.44□□□□□ -0.1
KCNC4-207ENST00000489935 A8MUN3 132 aa14.43□□□□□ -0.1
KCNC4-207ENST00000489935 A8MUU9 505 aa14.43□□□□□ -0.1
KCNC4-207ENST00000489935 C20orf166-AS1Q96NR2 134 aa14.43□□□□□ -0.1
KCNC4-207ENST00000489935 Q5VV11 94 aa14.34□□□□□ -0.11
KCNC4-207ENST00000489935 C7orf65Q6ZTY9 151 aa14.34□□□□□ -0.11
KCNC4-207ENST00000489935 FAT3Q8TDW7 4589 aa14.33□□□□□ -0.12
KCNC4-207ENST00000489935 BRK1Q8WUW1 75 aa14.33□□□□□ -0.12
KCNC4-207ENST00000489935 PRR15LQ9BU68 103 aa14.32□□□□□ -0.12
KCNC4-207ENST00000489935 KIAA1109Q2LD37 5005 aa14.29□□□□□ -0.12
KCNC4-207ENST00000489935 LINC01558Q9Y6Z2 57 aa14.29□□□□□ -0.12
KCNC4-207ENST00000489935 PRO0628Q9UI54 55 aa14.27□□□□□ -0.13
KCNC4-207ENST00000489935 CHKB-CPT1BH3BT56 60 aa14.23□□□□□ -0.13
KCNC4-207ENST00000489935 DMBT1Q9UGM3 2413 aaPredicted RBP14.21□□□□□ -0.13
KCNC4-207ENST00000489935 Q75L30 129 aa14.19□□□□□ -0.14
KCNC4-207ENST00000489935 EPPK1P58107 5090 aaKnown RBP14.18□□□□□ -0.14
KCNC4-207ENST00000489935 MT1HL1P0DM35 61 aa14.14□□□□□ -0.15
KCNC4-207ENST00000489935 MYCBP2O75592 4640 aa14.11□□□□□ -0.15
KCNC4-207ENST00000489935 SPINK7P58062 85 aa14.1□□□□□ -0.15
KCNC4-207ENST00000489935 A8MU10 97 aa14.02□□□□□ -0.17
KCNC4-207ENST00000489935 KRTAP3-1Q9BYR8 98 aa13.99□□□□□ -0.17
KCNC4-207ENST00000489935 A6NED7 52 aa13.98□□□□□ -0.17
KCNC4-207ENST00000489935 XP32Q5T750 250 aa13.96□□□□□ -0.18
KCNC4-207ENST00000489935 ATP11AUNQ6ZP68 121 aa13.95□□□□□ -0.18
KCNC4-207ENST00000489935 RPL37P61927 97 aaKnown RBP13.94□□□□□ -0.18
KCNC4-207ENST00000489935 LCA10Q71F78 164 aa13.92□□□□□ -0.18
KCNC4-207ENST00000489935 KRTAP4-5Q9BYR2 181 aa13.88□□□□□ -0.19
KCNC4-207ENST00000489935 A0A1B0GU69 56 aa13.87□□□□□ -0.19
KCNC4-207ENST00000489935 COX6B2Q6YFQ2 88 aa13.8□□□□□ -0.2
KCNC4-207ENST00000489935 CDC42SE1Q9NRR8 79 aa13.8□□□□□ -0.2
KCNC4-207ENST00000489935 SPTSSBQ8NFR3 76 aa13.71□□□□□ -0.22
KCNC4-207ENST00000489935 TPRXLQ17RH7 258 aa13.63□□□□□ -0.23
KCNC4-207ENST00000489935 ABCA13Q86UQ4 5058 aa13.6□□□□□ -0.23
KCNC4-207ENST00000489935 SEC61GP60059 68 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms