RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
GGPS1-207ENST00000489692 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
GGPS1-207ENST00000489692 OCR1Q9BZK8 76 aa6.86□□□□□ -1.31
GGPS1-207ENST00000489692 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
GGPS1-207ENST00000489692 J3KT08 172 aa6.84□□□□□ -1.31
GGPS1-207ENST00000489692 K7EQZ3 153 aa6.84□□□□□ -1.31
GGPS1-207ENST00000489692 C20orf197Q8N268 126 aa6.84□□□□□ -1.31
GGPS1-207ENST00000489692 RETNLBQ9BQ08 111 aa6.83□□□□□ -1.32
GGPS1-207ENST00000489692 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
GGPS1-207ENST00000489692 LINC00472Q9H8W2 130 aa6.83□□□□□ -1.32
GGPS1-207ENST00000489692 LPAP08519 4548 aa6.83□□□□□ -1.32
GGPS1-207ENST00000489692 HCG22E2RYF7 251 aa6.82□□□□□ -1.32
GGPS1-207ENST00000489692 NDUFC1O43677 76 aa6.81□□□□□ -1.32
GGPS1-207ENST00000489692 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
GGPS1-207ENST00000489692 IGLV9-49A0A0B4J1Y8 123 aa6.8□□□□□ -1.32
GGPS1-207ENST00000489692 A8MWP4 228 aa6.8□□□□□ -1.32
GGPS1-207ENST00000489692 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
GGPS1-207ENST00000489692 TMEM254Q8TBM7 123 aa6.78□□□□□ -1.32
GGPS1-207ENST00000489692 A0A0U1RQV1 116 aa6.77□□□□□ -1.33
GGPS1-207ENST00000489692 H7BZZ5 65 aa6.77□□□□□ -1.33
GGPS1-207ENST00000489692 RPS28P62857 69 aaKnown RBP6.77□□□□□ -1.33
GGPS1-207ENST00000489692 MOBPQ13875 183 aa6.77□□□□□ -1.33
GGPS1-207ENST00000489692 IGLV7-46A0A075B6I9 117 aa6.76□□□□□ -1.33
GGPS1-207ENST00000489692 CD164Q04900 197 aa6.76□□□□□ -1.33
GGPS1-207ENST00000489692 ATP5EP56381 51 aaPredicted RBP6.75□□□□□ -1.33
GGPS1-207ENST00000489692 DEFB116Q30KQ4 102 aa6.75□□□□□ -1.33
GGPS1-207ENST00000489692 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
GGPS1-207ENST00000489692 Q96NJ1 140 aa6.75□□□□□ -1.33
GGPS1-207ENST00000489692 FAM236DA0A1B0GTK5 79 aa6.74□□□□□ -1.33
GGPS1-207ENST00000489692 NDUFB1O75438 58 aa6.74□□□□□ -1.33
GGPS1-207ENST00000489692 FAM236CP0DP71 79 aa6.74□□□□□ -1.33
GGPS1-207ENST00000489692 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
GGPS1-207ENST00000489692 SNURFQ9Y675 71 aa6.74□□□□□ -1.33
GGPS1-207ENST00000489692 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
GGPS1-207ENST00000489692 CASC2Q6XLA1 102 aa6.72□□□□□ -1.33
GGPS1-207ENST00000489692 WFDC13Q8IUB5 93 aa6.71□□□□□ -1.34
GGPS1-207ENST00000489692 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
GGPS1-207ENST00000489692 TPRXLQ17RH7 258 aa6.69□□□□□ -1.34
GGPS1-207ENST00000489692 ASB16-AS1Q495Z4 193 aa6.69□□□□□ -1.34
GGPS1-207ENST00000489692 ZCCHC13Q8WW36 166 aaKnown RBP6.69□□□□□ -1.34
GGPS1-207ENST00000489692 H3BPC8 53 aa6.68□□□□□ -1.34
GGPS1-207ENST00000489692 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
GGPS1-207ENST00000489692 SPINK1P00995 79 aa6.67□□□□□ -1.34
GGPS1-207ENST00000489692 HRCT1Q6UXD1 115 aa6.67□□□□□ -1.34
GGPS1-207ENST00000489692 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
GGPS1-207ENST00000489692 FP248Q71RG6 208 aaPredicted RBP6.66□□□□□ -1.34
GGPS1-207ENST00000489692 C8orf17Q9NRJ1 99 aa6.66□□□□□ -1.34
GGPS1-207ENST00000489692 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
GGPS1-207ENST00000489692 MP68P56378 58 aa6.65□□□□□ -1.34
GGPS1-207ENST00000489692 Q5XG85 94 aa6.65□□□□□ -1.34
GGPS1-207ENST00000489692 TP53AIP1Q9HCN2 124 aa6.63□□□□□ -1.35
GGPS1-207ENST00000489692 MUC2Q02817 5179 aa6.63□□□□□ -1.35
GGPS1-207ENST00000489692 C8orf87E5RJ46 101 aa6.6□□□□□ -1.35
GGPS1-207ENST00000489692 H0Y9P7 68 aa6.6□□□□□ -1.35
GGPS1-207ENST00000489692 IGHV6-1A0A0B4J1U7 121 aa6.59□□□□□ -1.35
GGPS1-207ENST00000489692 TRAV22A0A0B4J277 110 aa6.59□□□□□ -1.35
GGPS1-207ENST00000489692 MRPL34Q9BQ48 92 aaKnown RBP6.58□□□□□ -1.36
GGPS1-207ENST00000489692 LIMD2Q9BT23 127 aa6.58□□□□□ -1.36
GGPS1-207ENST00000489692 RPS29P62273 56 aaKnown RBP6.57□□□□□ -1.36
GGPS1-207ENST00000489692 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
GGPS1-207ENST00000489692 LINC00208Q96KT6 92 aa6.56□□□□□ -1.36
GGPS1-207ENST00000489692 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
GGPS1-207ENST00000489692 SEC61BP60468 96 aaKnown RBP6.54□□□□□ -1.36
GGPS1-207ENST00000489692 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
GGPS1-207ENST00000489692 C1orf195Q5TG92 126 aa6.53□□□□□ -1.36
GGPS1-207ENST00000489692 C1orf64Q8NEQ6 169 aa6.53□□□□□ -1.36
GGPS1-207ENST00000489692 SMIM26A0A096LP01 95 aa6.52□□□□□ -1.37
GGPS1-207ENST00000489692 NOTCH2NLQ7Z3S9 236 aa6.5□□□□□ -1.37
GGPS1-207ENST00000489692 FAT4Q6V0I7 4981 aa6.5□□□□□ -1.37
GGPS1-207ENST00000489692 NDUFS5O43920 106 aa6.49□□□□□ -1.37
GGPS1-207ENST00000489692 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
GGPS1-207ENST00000489692 C9orf92A6NGG3 77 aa6.47□□□□□ -1.37
GGPS1-207ENST00000489692 LINC00313P59037 77 aa6.47□□□□□ -1.37
GGPS1-207ENST00000489692 XP32Q5T750 250 aa6.46□□□□□ -1.38
GGPS1-207ENST00000489692 LOC101927531A0A1B0GV80 90 aa6.45□□□□□ -1.38
GGPS1-207ENST00000489692 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
GGPS1-207ENST00000489692 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
GGPS1-207ENST00000489692 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
GGPS1-207ENST00000489692 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
GGPS1-207ENST00000489692 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
GGPS1-207ENST00000489692 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
GGPS1-207ENST00000489692 Q5W150 140 aa6.38□□□□□ -1.39
GGPS1-207ENST00000489692 C4orf26Q17RF5 130 aa6.36□□□□□ -1.39
GGPS1-207ENST00000489692 IGKV2-30P06310 120 aa6.33□□□□□ -1.4
GGPS1-207ENST00000489692 Q1T7F1 81 aa6.33□□□□□ -1.4
GGPS1-207ENST00000489692 V9GYY9 64 aa6.32□□□□□ -1.4
GGPS1-207ENST00000489692 COA5Q86WW8 74 aa6.31□□□□□ -1.4
GGPS1-207ENST00000489692 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
GGPS1-207ENST00000489692 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
GGPS1-207ENST00000489692 COX6B2Q6YFQ2 88 aa6.26□□□□□ -1.41
GGPS1-207ENST00000489692 HRES1P13985 223 aa6.25□□□□□ -1.41
GGPS1-207ENST00000489692 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
GGPS1-207ENST00000489692 DMAC1Q96GE9 116 aa6.25□□□□□ -1.41
GGPS1-207ENST00000489692 A8MUU9 505 aa6.24□□□□□ -1.41
GGPS1-207ENST00000489692 C20orf166-AS1Q96NR2 134 aa6.24□□□□□ -1.41
GGPS1-207ENST00000489692 M0R2T5 61 aa6.22□□□□□ -1.41
GGPS1-207ENST00000489692 ACYP2P14621 99 aa6.22□□□□□ -1.41
GGPS1-207ENST00000489692 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
GGPS1-207ENST00000489692 ATP11AUNQ6ZP68 121 aa6.22□□□□□ -1.41
GGPS1-207ENST00000489692 KRTAP9-6A0A140TA67 174 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms