RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
SCAMP4-208ENST00000489554 J3KT08 172 aa6.01□□□□□ -1.45
SCAMP4-208ENST00000489554 SPINK1P00995 79 aa6.01□□□□□ -1.45
SCAMP4-208ENST00000489554 SERP2Q8N6R1 65 aa6.01□□□□□ -1.45
SCAMP4-208ENST00000489554 A0A087WVE0 104 aa6□□□□□ -1.45
SCAMP4-208ENST00000489554 COX7CP15954 63 aa6□□□□□ -1.45
SCAMP4-208ENST00000489554 FP248Q71RG6 208 aaPredicted RBP6□□□□□ -1.45
SCAMP4-208ENST00000489554 A0A087WSZ3 146 aa5.99□□□□□ -1.45
SCAMP4-208ENST00000489554 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
SCAMP4-208ENST00000489554 CD164Q04900 197 aa5.98□□□□□ -1.45
SCAMP4-208ENST00000489554 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
SCAMP4-208ENST00000489554 A0A0U1RQV1 116 aa5.96□□□□□ -1.46
SCAMP4-208ENST00000489554 NDUFB1O75438 58 aa5.96□□□□□ -1.46
SCAMP4-208ENST00000489554 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
SCAMP4-208ENST00000489554 HRCT1Q6UXD1 115 aa5.96□□□□□ -1.46
SCAMP4-208ENST00000489554 MUC2Q02817 5179 aa5.94□□□□□ -1.46
SCAMP4-208ENST00000489554 Q5XG85 94 aa5.93□□□□□ -1.46
SCAMP4-208ENST00000489554 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
SCAMP4-208ENST00000489554 DSCR10P59022 87 aa5.92□□□□□ -1.46
SCAMP4-208ENST00000489554 LINC00472Q9H8W2 130 aa5.92□□□□□ -1.46
SCAMP4-208ENST00000489554 MUC17Q685J3 4493 aa5.91□□□□□ -1.46
SCAMP4-208ENST00000489554 A8MWP4 228 aa5.91□□□□□ -1.46
SCAMP4-208ENST00000489554 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
SCAMP4-208ENST00000489554 HCG22E2RYF7 251 aa5.9□□□□□ -1.46
SCAMP4-208ENST00000489554 Q96NJ1 140 aa5.9□□□□□ -1.46
SCAMP4-208ENST00000489554 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
SCAMP4-208ENST00000489554 PRR15Q8IV56 129 aa5.89□□□□□ -1.47
SCAMP4-208ENST00000489554 K7EQZ3 153 aa5.88□□□□□ -1.47
SCAMP4-208ENST00000489554 NDUFC1O43677 76 aa5.88□□□□□ -1.47
SCAMP4-208ENST00000489554 Q8N9L7 120 aa5.88□□□□□ -1.47
SCAMP4-208ENST00000489554 LIMD2Q9BT23 127 aa5.88□□□□□ -1.47
SCAMP4-208ENST00000489554 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
SCAMP4-208ENST00000489554 C5orf47Q569G3 176 aa5.85□□□□□ -1.47
SCAMP4-208ENST00000489554 KLKP1Q107X0 134 aa5.84□□□□□ -1.47
SCAMP4-208ENST00000489554 DEFB116Q30KQ4 102 aa5.84□□□□□ -1.47
SCAMP4-208ENST00000489554 CASC2Q6XLA1 102 aa5.84□□□□□ -1.47
SCAMP4-208ENST00000489554 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
SCAMP4-208ENST00000489554 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
SCAMP4-208ENST00000489554 TMEM258P61165 79 aa5.83□□□□□ -1.48
SCAMP4-208ENST00000489554 C20orf197Q8N268 126 aa5.83□□□□□ -1.48
SCAMP4-208ENST00000489554 TP53AIP1Q9HCN2 124 aa5.82□□□□□ -1.48
SCAMP4-208ENST00000489554 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
SCAMP4-208ENST00000489554 H3BPC8 53 aa5.81□□□□□ -1.48
SCAMP4-208ENST00000489554 XP32Q5T750 250 aa5.81□□□□□ -1.48
SCAMP4-208ENST00000489554 hDV103S1A0JD37 113 aa5.8□□□□□ -1.48
SCAMP4-208ENST00000489554 C8orf87E5RJ46 101 aa5.8□□□□□ -1.48
SCAMP4-208ENST00000489554 MP68P56378 58 aa5.8□□□□□ -1.48
SCAMP4-208ENST00000489554 TMEM254Q8TBM7 123 aa5.8□□□□□ -1.48
SCAMP4-208ENST00000489554 FAT4Q6V0I7 4981 aa5.79□□□□□ -1.48
SCAMP4-208ENST00000489554 WFDC13Q8IUB5 93 aa5.79□□□□□ -1.48
SCAMP4-208ENST00000489554 ATP5EP56381 51 aaPredicted RBP5.78□□□□□ -1.48
SCAMP4-208ENST00000489554 LCE2AQ5TA79 106 aaPredicted RBP5.78□□□□□ -1.48
SCAMP4-208ENST00000489554 C8orf17Q9NRJ1 99 aa5.78□□□□□ -1.48
SCAMP4-208ENST00000489554 IGHV6-1A0A0B4J1U7 121 aa5.76□□□□□ -1.49
SCAMP4-208ENST00000489554 MMP24-AS1A0A0U1RRL7 71 aa5.76□□□□□ -1.49
SCAMP4-208ENST00000489554 C9orf92A6NGG3 77 aa5.74□□□□□ -1.49
SCAMP4-208ENST00000489554 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
SCAMP4-208ENST00000489554 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
SCAMP4-208ENST00000489554 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
SCAMP4-208ENST00000489554 H7BZZ5 65 aa5.72□□□□□ -1.49
SCAMP4-208ENST00000489554 NOTCH2NLQ7Z3S9 236 aa5.72□□□□□ -1.49
SCAMP4-208ENST00000489554 SNURFQ9Y675 71 aa5.72□□□□□ -1.49
SCAMP4-208ENST00000489554 FAM236DA0A1B0GTK5 79 aa5.71□□□□□ -1.5
SCAMP4-208ENST00000489554 FAM236CP0DP71 79 aa5.71□□□□□ -1.5
SCAMP4-208ENST00000489554 LINC00313P59037 77 aa5.71□□□□□ -1.5
SCAMP4-208ENST00000489554 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
SCAMP4-208ENST00000489554 H0Y9P7 68 aa5.7□□□□□ -1.5
SCAMP4-208ENST00000489554 NDUFS5O43920 106 aa5.7□□□□□ -1.5
SCAMP4-208ENST00000489554 KRTAP16-1A8MUX0 517 aa5.69□□□□□ -1.5
SCAMP4-208ENST00000489554 PCOTHQ58A44 107 aa5.69□□□□□ -1.5
SCAMP4-208ENST00000489554 ZCCHC13Q8WW36 166 aaKnown RBP5.67□□□□□ -1.5
SCAMP4-208ENST00000489554 LINC00208Q96KT6 92 aa5.66□□□□□ -1.5
SCAMP4-208ENST00000489554 CYSTM1Q9H1C7 97 aa5.66□□□□□ -1.5
SCAMP4-208ENST00000489554 RPL37P61927 97 aaKnown RBP5.65□□□□□ -1.5
SCAMP4-208ENST00000489554 C1orf64Q8NEQ6 169 aa5.65□□□□□ -1.5
SCAMP4-208ENST00000489554 SERP1Q9Y6X1 66 aa5.65□□□□□ -1.5
SCAMP4-208ENST00000489554 KRTAP9-2Q9BYQ4 174 aa5.64□□□□□ -1.51
SCAMP4-208ENST00000489554 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
SCAMP4-208ENST00000489554 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
SCAMP4-208ENST00000489554 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
SCAMP4-208ENST00000489554 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
SCAMP4-208ENST00000489554 A8MUU9 505 aa5.6□□□□□ -1.51
SCAMP4-208ENST00000489554 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
SCAMP4-208ENST00000489554 KRTAP19-2Q3LHN2 52 aa5.59□□□□□ -1.51
SCAMP4-208ENST00000489554 CYP4F30PQ9H0H9 118 aa5.58□□□□□ -1.52
SCAMP4-208ENST00000489554 Q75L30 129 aa5.57□□□□□ -1.52
SCAMP4-208ENST00000489554 ATP11AUNQ6ZP68 121 aa5.55□□□□□ -1.52
SCAMP4-208ENST00000489554 SMIM26A0A096LP01 95 aa5.54□□□□□ -1.52
SCAMP4-208ENST00000489554 MT1HP80294 61 aa5.54□□□□□ -1.52
SCAMP4-208ENST00000489554 COX6B2Q6YFQ2 88 aa5.51□□□□□ -1.53
SCAMP4-208ENST00000489554 LCE2DQ5TA82 110 aaPredicted RBP5.49□□□□□ -1.53
SCAMP4-208ENST00000489554 Q5W150 140 aa5.49□□□□□ -1.53
SCAMP4-208ENST00000489554 IGKV2-30P06310 120 aa5.48□□□□□ -1.53
SCAMP4-208ENST00000489554 M0R2T5 61 aa5.46□□□□□ -1.54
SCAMP4-208ENST00000489554 V9GYY9 64 aa5.46□□□□□ -1.54
SCAMP4-208ENST00000489554 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
SCAMP4-208ENST00000489554 ACYP2P14621 99 aa5.44□□□□□ -1.54
SCAMP4-208ENST00000489554 KRTAP10-6P60371 365 aaPredicted RBP5.44□□□□□ -1.54
SCAMP4-208ENST00000489554 C7orf65Q6ZTY9 151 aa5.44□□□□□ -1.54
SCAMP4-208ENST00000489554 LORP23490 312 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms