RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
SMARCD3-213ENST00000489503 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
SMARCD3-213ENST00000489503 LINC00313P59037 77 aa6.44□□□□□ -1.38
SMARCD3-213ENST00000489503 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
SMARCD3-213ENST00000489503 A0A1B0GVX0 72 aa6.43□□□□□ -1.38
SMARCD3-213ENST00000489503 PDE6GP18545 87 aa6.42□□□□□ -1.38
SMARCD3-213ENST00000489503 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
SMARCD3-213ENST00000489503 C21orf62-AS1Q17RA5 79 aa6.4□□□□□ -1.38
SMARCD3-213ENST00000489503 J3KT08 172 aa6.39□□□□□ -1.39
SMARCD3-213ENST00000489503 K7EP34 96 aa6.39□□□□□ -1.39
SMARCD3-213ENST00000489503 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
SMARCD3-213ENST00000489503 PRO0461Q9UI25 63 aa6.37□□□□□ -1.39
SMARCD3-213ENST00000489503 IGKV3D-7A0A0C4DH55 119 aa6.36□□□□□ -1.39
SMARCD3-213ENST00000489503 A0A1B0GW54 56 aa6.36□□□□□ -1.39
SMARCD3-213ENST00000489503 MT1HP80294 61 aa6.36□□□□□ -1.39
SMARCD3-213ENST00000489503 A8MWP4 228 aa6.35□□□□□ -1.39
SMARCD3-213ENST00000489503 NREPQ16612 68 aa6.35□□□□□ -1.39
SMARCD3-213ENST00000489503 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
SMARCD3-213ENST00000489503 NDUFB1O75438 58 aa6.34□□□□□ -1.39
SMARCD3-213ENST00000489503 C8orf17Q9NRJ1 99 aa6.33□□□□□ -1.4
SMARCD3-213ENST00000489503 K7EQZ3 153 aa6.3□□□□□ -1.4
SMARCD3-213ENST00000489503 PRR15Q8IV56 129 aa6.3□□□□□ -1.4
SMARCD3-213ENST00000489503 Q6ZVQ6 151 aa6.29□□□□□ -1.4
SMARCD3-213ENST00000489503 GTF2H5Q6ZYL4 71 aa6.29□□□□□ -1.4
SMARCD3-213ENST00000489503 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SMARCD3-213ENST00000489503 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
SMARCD3-213ENST00000489503 BPY2O14599 106 aa6.27□□□□□ -1.41
SMARCD3-213ENST00000489503 ZCCHC13Q8WW36 166 aaKnown RBP6.27□□□□□ -1.41
SMARCD3-213ENST00000489503 Q8N9L7 120 aa6.26□□□□□ -1.41
SMARCD3-213ENST00000489503 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
SMARCD3-213ENST00000489503 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
SMARCD3-213ENST00000489503 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
SMARCD3-213ENST00000489503 M0R2T5 61 aa6.23□□□□□ -1.41
SMARCD3-213ENST00000489503 HRES1P13985 223 aa6.23□□□□□ -1.41
SMARCD3-213ENST00000489503 ETDBQ3ZM63 59 aa6.23□□□□□ -1.41
SMARCD3-213ENST00000489503 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
SMARCD3-213ENST00000489503 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
SMARCD3-213ENST00000489503 hDV103S1A0JD37 113 aa6.21□□□□□ -1.42
SMARCD3-213ENST00000489503 F8W1H4 67 aa6.21□□□□□ -1.42
SMARCD3-213ENST00000489503 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.42
SMARCD3-213ENST00000489503 KRTAP10-6P60371 365 aaPredicted RBP6.2□□□□□ -1.42
SMARCD3-213ENST00000489503 FAM236DA0A1B0GTK5 79 aa6.19□□□□□ -1.42
SMARCD3-213ENST00000489503 NDUFS5O43920 106 aa6.19□□□□□ -1.42
SMARCD3-213ENST00000489503 FAM236CP0DP71 79 aa6.19□□□□□ -1.42
SMARCD3-213ENST00000489503 LORP23490 312 aaPredicted RBP6.19□□□□□ -1.42
SMARCD3-213ENST00000489503 UBL5Q9BZL1 73 aa6.19□□□□□ -1.42
SMARCD3-213ENST00000489503 SPINK7P58062 85 aa6.18□□□□□ -1.42
SMARCD3-213ENST00000489503 MPLKIPQ8TAP9 179 aa6.18□□□□□ -1.42
SMARCD3-213ENST00000489503 CASC2Q6XLA1 102 aa6.15□□□□□ -1.42
SMARCD3-213ENST00000489503 RBM12B-AS1Q9P1G2 102 aa6.15□□□□□ -1.42
SMARCD3-213ENST00000489503 HCG22E2RYF7 251 aa6.13□□□□□ -1.43
SMARCD3-213ENST00000489503 A0A1B0GV90 55 aa6.12□□□□□ -1.43
SMARCD3-213ENST00000489503 Q5W150 140 aa6.11□□□□□ -1.43
SMARCD3-213ENST00000489503 IGKV2D-30A0A075B6S6 120 aa6.08□□□□□ -1.44
SMARCD3-213ENST00000489503 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
SMARCD3-213ENST00000489503 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
SMARCD3-213ENST00000489503 CXCL6P80162 114 aa6.06□□□□□ -1.44
SMARCD3-213ENST00000489503 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
SMARCD3-213ENST00000489503 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
SMARCD3-213ENST00000489503 FAM240AA0A1B0GVK7 77 aa6.01□□□□□ -1.45
SMARCD3-213ENST00000489503 ACYP1P07311 99 aa6.01□□□□□ -1.45
SMARCD3-213ENST00000489503 KRTAP9-6A0A140TA67 174 aa5.98□□□□□ -1.45
SMARCD3-213ENST00000489503 MT2AP02795 61 aa5.98□□□□□ -1.45
SMARCD3-213ENST00000489503 ATP5EP2Q5VTU8 51 aa5.96□□□□□ -1.46
SMARCD3-213ENST00000489503 HIST1H4AP62805 103 aaKnown RBP5.95□□□□□ -1.46
SMARCD3-213ENST00000489503 C4orf26Q17RF5 130 aa5.95□□□□□ -1.46
SMARCD3-213ENST00000489503 MT1FP04733 61 aa5.94□□□□□ -1.46
SMARCD3-213ENST00000489503 FSIP2Q5CZC0 6907 aa5.93□□□□□ -1.46
SMARCD3-213ENST00000489503 A0A087WVE0 104 aa5.93□□□□□ -1.46
SMARCD3-213ENST00000489503 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
SMARCD3-213ENST00000489503 TP53AIP1Q9HCN2 124 aa5.93□□□□□ -1.46
SMARCD3-213ENST00000489503 LINC00643Q86TS7 51 aa5.91□□□□□ -1.46
SMARCD3-213ENST00000489503 CRCT1Q9UGL9 99 aa5.9□□□□□ -1.46
SMARCD3-213ENST00000489503 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
SMARCD3-213ENST00000489503 TRAV22A0A0B4J277 110 aa5.86□□□□□ -1.47
SMARCD3-213ENST00000489503 KRTAP3-1Q9BYR8 98 aa5.86□□□□□ -1.47
SMARCD3-213ENST00000489503 C1orf64Q8NEQ6 169 aa5.83□□□□□ -1.48
SMARCD3-213ENST00000489503 CYP4F30PQ9H0H9 118 aa5.83□□□□□ -1.48
SMARCD3-213ENST00000489503 USH2AO75445 5202 aa5.82□□□□□ -1.48
SMARCD3-213ENST00000489503 H0Y9P7 68 aa5.82□□□□□ -1.48
SMARCD3-213ENST00000489503 J3QR89 54 aa5.82□□□□□ -1.48
SMARCD3-213ENST00000489503 KRTAP9-3Q9BYQ3 159 aa5.82□□□□□ -1.48
SMARCD3-213ENST00000489503 UQCRQO14949 82 aa5.81□□□□□ -1.48
SMARCD3-213ENST00000489503 LOC101927531A0A1B0GV80 90 aa5.8□□□□□ -1.48
SMARCD3-213ENST00000489503 LCE2BO14633 110 aa5.8□□□□□ -1.48
SMARCD3-213ENST00000489503 C5orf47Q569G3 176 aa5.79□□□□□ -1.48
SMARCD3-213ENST00000489503 S4R3F8 94 aa5.78□□□□□ -1.48
SMARCD3-213ENST00000489503 LCA10Q71F78 164 aa5.75□□□□□ -1.49
SMARCD3-213ENST00000489503 OCR1Q9BZK8 76 aa5.75□□□□□ -1.49
SMARCD3-213ENST00000489503 SSPOA2VEC9 5147 aa5.74□□□□□ -1.49
SMARCD3-213ENST00000489503 ATOX1O00244 68 aa5.74□□□□□ -1.49
SMARCD3-213ENST00000489503 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
SMARCD3-213ENST00000489503 MT-ATP8P03928 68 aa5.7□□□□□ -1.5
SMARCD3-213ENST00000489503 KLKP1Q107X0 134 aa5.7□□□□□ -1.5
SMARCD3-213ENST00000489503 K7ERU9 68 aa5.68□□□□□ -1.5
SMARCD3-213ENST00000489503 MP68P56378 58 aa5.68□□□□□ -1.5
SMARCD3-213ENST00000489503 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
SMARCD3-213ENST00000489503 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
SMARCD3-213ENST00000489503 FAM236AA0A1B0GUQ0 79 aa5.66□□□□□ -1.5
SMARCD3-213ENST00000489503 FAM236BA0A1B0GV22 79 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms