RNA–Protein interactions for RNA: ENST00000489452.1

LINC00173-204, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 543 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-204ENST00000489452 TRACP01848 142 aa6.61□□□□□ -1.35
LINC00173-204ENST00000489452 KRTAP9-3Q9BYQ3 159 aa6.61□□□□□ -1.35
LINC00173-204ENST00000489452 TMEM256-PLSCR3K7ERE1 68 aa6.59□□□□□ -1.35
LINC00173-204ENST00000489452 VPS25Q9BRG1 176 aa6.59□□□□□ -1.35
LINC00173-204ENST00000489452 K7ERJ3 54 aa6.58□□□□□ -1.36
LINC00173-204ENST00000489452 H3BQ85 93 aa6.57□□□□□ -1.36
LINC00173-204ENST00000489452 A0A1B0GVX0 72 aa6.55□□□□□ -1.36
LINC00173-204ENST00000489452 COX6CP09669 75 aa6.55□□□□□ -1.36
LINC00173-204ENST00000489452 MTURNQ8N3F0 131 aa6.54□□□□□ -1.36
LINC00173-204ENST00000489452 C8orf87E5RJ46 101 aa6.53□□□□□ -1.36
LINC00173-204ENST00000489452 SPINK7P58062 85 aa6.53□□□□□ -1.36
LINC00173-204ENST00000489452 UBE2V1Q13404 147 aa6.53□□□□□ -1.36
LINC00173-204ENST00000489452 HSD52Q0P140 79 aa6.52□□□□□ -1.37
LINC00173-204ENST00000489452 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
LINC00173-204ENST00000489452 RBM3P98179 157 aaKnown RBP6.51□□□□□ -1.37
LINC00173-204ENST00000489452 SCGB1C2P0DMR2 95 aa6.5□□□□□ -1.37
LINC00173-204ENST00000489452 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
LINC00173-204ENST00000489452 LYRM7Q5U5X0 104 aa6.48□□□□□ -1.37
LINC00173-204ENST00000489452 J3KT08 172 aa6.46□□□□□ -1.38
LINC00173-204ENST00000489452 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
LINC00173-204ENST00000489452 MACF1Q9UPN3 7388 aaKnown RBP6.45□□□□□ -1.38
LINC00173-204ENST00000489452 C9JAW5 83 aa6.45□□□□□ -1.38
LINC00173-204ENST00000489452 NDUFB1O75438 58 aa6.45□□□□□ -1.38
LINC00173-204ENST00000489452 PYY3Q5JQD4 70 aa6.44□□□□□ -1.38
LINC00173-204ENST00000489452 Q6ZQT0 140 aa6.44□□□□□ -1.38
LINC00173-204ENST00000489452 WFDC13Q8IUB5 93 aa6.44□□□□□ -1.38
LINC00173-204ENST00000489452 LINC00846Q9NV44 126 aa6.44□□□□□ -1.38
LINC00173-204ENST00000489452 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
LINC00173-204ENST00000489452 SYNE2Q8WXH0 6885 aaKnown RBP6.41□□□□□ -1.38
LINC00173-204ENST00000489452 KRTAP19-6Q3LI70 58 aa6.41□□□□□ -1.38
LINC00173-204ENST00000489452 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
LINC00173-204ENST00000489452 A8MWP4 228 aa6.4□□□□□ -1.38
LINC00173-204ENST00000489452 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.38
LINC00173-204ENST00000489452 C21orf62-AS1Q17RA5 79 aa6.39□□□□□ -1.39
LINC00173-204ENST00000489452 IGKV3D-7A0A0C4DH55 119 aa6.38□□□□□ -1.39
LINC00173-204ENST00000489452 Q6ZVQ6 151 aa6.36□□□□□ -1.39
LINC00173-204ENST00000489452 NAA38Q9BRA0 125 aaKnown RBP6.34□□□□□ -1.39
LINC00173-204ENST00000489452 JMJD7-PLA2G4BH0Y9G9 81 aa6.32□□□□□ -1.4
LINC00173-204ENST00000489452 LOC110117498A0A087WWA1 95 aa6.31□□□□□ -1.4
LINC00173-204ENST00000489452 ATXN8Q156A1 80 aa6.31□□□□□ -1.4
LINC00173-204ENST00000489452 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
LINC00173-204ENST00000489452 PRR15Q8IV56 129 aa6.31□□□□□ -1.4
LINC00173-204ENST00000489452 C14orf132Q9NPU4 83 aa6.31□□□□□ -1.4
LINC00173-204ENST00000489452 NREPQ16612 68 aa6.3□□□□□ -1.4
LINC00173-204ENST00000489452 NDUFS5O43920 106 aa6.29□□□□□ -1.4
LINC00173-204ENST00000489452 A0A1B0GW54 56 aa6.28□□□□□ -1.4
LINC00173-204ENST00000489452 MRPL34Q9BQ48 92 aaKnown RBP6.28□□□□□ -1.4
LINC00173-204ENST00000489452 TMA7Q9Y2S6 64 aaKnown RBP6.28□□□□□ -1.4
LINC00173-204ENST00000489452 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
LINC00173-204ENST00000489452 PDE6GP18545 87 aa6.27□□□□□ -1.41
LINC00173-204ENST00000489452 TMEM254Q8TBM7 123 aa6.27□□□□□ -1.41
LINC00173-204ENST00000489452 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
LINC00173-204ENST00000489452 IGKV2-30P06310 120 aa6.26□□□□□ -1.41
LINC00173-204ENST00000489452 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
LINC00173-204ENST00000489452 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
LINC00173-204ENST00000489452 K7EQZ3 153 aa6.22□□□□□ -1.41
LINC00173-204ENST00000489452 M0R143 59 aa6.21□□□□□ -1.42
LINC00173-204ENST00000489452 Q5W150 140 aa6.21□□□□□ -1.42
LINC00173-204ENST00000489452 C4orf26Q17RF5 130 aa6.17□□□□□ -1.42
LINC00173-204ENST00000489452 C7orf65Q6ZTY9 151 aa6.17□□□□□ -1.42
LINC00173-204ENST00000489452 KRTAP4-8Q9BYQ9 185 aa6.17□□□□□ -1.42
LINC00173-204ENST00000489452 BPY2O14599 106 aa6.15□□□□□ -1.42
LINC00173-204ENST00000489452 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
LINC00173-204ENST00000489452 Q8N9L7 120 aa6.14□□□□□ -1.43
LINC00173-204ENST00000489452 HCG22E2RYF7 251 aa6.12□□□□□ -1.43
LINC00173-204ENST00000489452 BATFQ16520 125 aa6.12□□□□□ -1.43
LINC00173-204ENST00000489452 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
LINC00173-204ENST00000489452 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
LINC00173-204ENST00000489452 CASC2Q6XLA1 102 aa6.11□□□□□ -1.43
LINC00173-204ENST00000489452 TSTD3H0UI37 97 aa6.09□□□□□ -1.43
LINC00173-204ENST00000489452 A6NN06 94 aa6.08□□□□□ -1.44
LINC00173-204ENST00000489452 H3BT86 120 aa6.06□□□□□ -1.44
LINC00173-204ENST00000489452 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
LINC00173-204ENST00000489452 MT1BP07438 61 aa6.04□□□□□ -1.44
LINC00173-204ENST00000489452 CXCL6P80162 114 aa6.04□□□□□ -1.44
LINC00173-204ENST00000489452 Q5VV11 94 aa6.04□□□□□ -1.44
LINC00173-204ENST00000489452 KRTAP3-1Q9BYR8 98 aa6.04□□□□□ -1.44
LINC00173-204ENST00000489452 C9orf118A6NHY6 69 aa6.03□□□□□ -1.44
LINC00173-204ENST00000489452 S4R3F8 94 aa6.03□□□□□ -1.44
LINC00173-204ENST00000489452 NEBP20929 6669 aa6.02□□□□□ -1.45
LINC00173-204ENST00000489452 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
LINC00173-204ENST00000489452 A0A1W2PPM0 123 aa6.01□□□□□ -1.45
LINC00173-204ENST00000489452 C1orf64Q8NEQ6 169 aa6.01□□□□□ -1.45
LINC00173-204ENST00000489452 TAX1BP3O14907 124 aa5.99□□□□□ -1.45
LINC00173-204ENST00000489452 LCA10Q71F78 164 aa5.99□□□□□ -1.45
LINC00173-204ENST00000489452 SMIM6P0DI80 62 aa5.98□□□□□ -1.45
LINC00173-204ENST00000489452 KRTAP19-8Q3LI54 63 aa5.98□□□□□ -1.45
LINC00173-204ENST00000489452 SPRR2GQ9BYE4 73 aa5.98□□□□□ -1.45
LINC00173-204ENST00000489452 KRTAP10-5P60370 271 aa5.94□□□□□ -1.46
LINC00173-204ENST00000489452 UBL5Q9BZL1 73 aa5.93□□□□□ -1.46
LINC00173-204ENST00000489452 SPCS1Q9Y6A9 102 aa5.92□□□□□ -1.46
LINC00173-204ENST00000489452 KLKP1Q107X0 134 aa5.91□□□□□ -1.46
LINC00173-204ENST00000489452 MDN1Q9NU22 5596 aa5.91□□□□□ -1.46
LINC00173-204ENST00000489452 KRTAP20-1Q3LI63 56 aa5.9□□□□□ -1.46
LINC00173-204ENST00000489452 KMT2DO14686 5537 aa5.89□□□□□ -1.47
LINC00173-204ENST00000489452 KRTAP4-12Q9BQ66 201 aa5.88□□□□□ -1.47
LINC00173-204ENST00000489452 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
LINC00173-204ENST00000489452 IMUPQ9GZP8 106 aa5.87□□□□□ -1.47
LINC00173-204ENST00000489452 TP53AIP1Q9HCN2 124 aa5.86□□□□□ -1.47
LINC00173-204ENST00000489452 A0A087WVE0 104 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms