RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 SS18L2Q9UHA2 77 aa6.15□□□□□ -1.42
SFXN3-207ENST00000489434 C9JAW5 83 aa6.14□□□□□ -1.43
SFXN3-207ENST00000489434 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
SFXN3-207ENST00000489434 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.11□□□□□ -1.43
SFXN3-207ENST00000489434 C20orf166-AS1Q96NR2 134 aa6.11□□□□□ -1.43
SFXN3-207ENST00000489434 A8MUU9 505 aa6.09□□□□□ -1.43
SFXN3-207ENST00000489434 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
SFXN3-207ENST00000489434 USH2AO75445 5202 aa6.09□□□□□ -1.44
SFXN3-207ENST00000489434 TRACP01848 142 aa6.08□□□□□ -1.44
SFXN3-207ENST00000489434 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
SFXN3-207ENST00000489434 TRIAP1O43715 76 aa6.07□□□□□ -1.44
SFXN3-207ENST00000489434 SSPOA2VEC9 5147 aa6.07□□□□□ -1.44
SFXN3-207ENST00000489434 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
SFXN3-207ENST00000489434 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
SFXN3-207ENST00000489434 A0A087WSZ3 146 aa6.04□□□□□ -1.44
SFXN3-207ENST00000489434 GHRHP01286 108 aa6.04□□□□□ -1.44
SFXN3-207ENST00000489434 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
SFXN3-207ENST00000489434 H0YGX0 51 aa6.03□□□□□ -1.44
SFXN3-207ENST00000489434 UQCRQO14949 82 aa6.03□□□□□ -1.44
SFXN3-207ENST00000489434 A0A1B0GX51 115 aa6.02□□□□□ -1.45
SFXN3-207ENST00000489434 DSCR10P59022 87 aa6.02□□□□□ -1.45
SFXN3-207ENST00000489434 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
SFXN3-207ENST00000489434 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
SFXN3-207ENST00000489434 CCDC179H3BU77 68 aa5.99□□□□□ -1.45
SFXN3-207ENST00000489434 MT2AP02795 61 aa5.99□□□□□ -1.45
SFXN3-207ENST00000489434 LINC00313P59037 77 aa5.99□□□□□ -1.45
SFXN3-207ENST00000489434 ATOX1O00244 68 aa5.98□□□□□ -1.45
SFXN3-207ENST00000489434 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
SFXN3-207ENST00000489434 HIST1H4AP62805 103 aaKnown RBP5.97□□□□□ -1.45
SFXN3-207ENST00000489434 IGKV4-1P06312 121 aa5.96□□□□□ -1.46
SFXN3-207ENST00000489434 BAALC-AS2P0C853 105 aa5.96□□□□□ -1.46
SFXN3-207ENST00000489434 COX7CP15954 63 aa5.96□□□□□ -1.46
SFXN3-207ENST00000489434 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
SFXN3-207ENST00000489434 SMIM20Q8N5G0 67 aa5.94□□□□□ -1.46
SFXN3-207ENST00000489434 A0A1W2PNM2 257 aa5.93□□□□□ -1.46
SFXN3-207ENST00000489434 KRTAP16-1A8MUX0 517 aa5.93□□□□□ -1.46
SFXN3-207ENST00000489434 H3BQ85 93 aa5.93□□□□□ -1.46
SFXN3-207ENST00000489434 MT1FP04733 61 aa5.93□□□□□ -1.46
SFXN3-207ENST00000489434 ATP5EP2Q5VTU8 51 aa5.93□□□□□ -1.46
SFXN3-207ENST00000489434 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
SFXN3-207ENST00000489434 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 FAM236AA0A1B0GUQ0 79 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 FAM236BA0A1B0GV22 79 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 J3KT08 172 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 LCE2BO14633 110 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 MPLKIPQ8TAP9 179 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 LINC00846Q9NV44 126 aa5.92□□□□□ -1.46
SFXN3-207ENST00000489434 HRES1P13985 223 aa5.91□□□□□ -1.46
SFXN3-207ENST00000489434 TMEM258P61165 79 aa5.91□□□□□ -1.46
SFXN3-207ENST00000489434 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
SFXN3-207ENST00000489434 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
SFXN3-207ENST00000489434 DNAL4O96015 105 aa5.9□□□□□ -1.46
SFXN3-207ENST00000489434 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
SFXN3-207ENST00000489434 C5orf47Q569G3 176 aa5.89□□□□□ -1.47
SFXN3-207ENST00000489434 SERP2Q8N6R1 65 aa5.89□□□□□ -1.47
SFXN3-207ENST00000489434 DEFB116Q30KQ4 102 aa5.88□□□□□ -1.47
SFXN3-207ENST00000489434 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
SFXN3-207ENST00000489434 ORMDL1Q9P0S3 153 aa5.88□□□□□ -1.47
SFXN3-207ENST00000489434 CCKP06307 115 aa5.87□□□□□ -1.47
SFXN3-207ENST00000489434 LINC00472Q9H8W2 130 aa5.87□□□□□ -1.47
SFXN3-207ENST00000489434 C8orf87E5RJ46 101 aa5.85□□□□□ -1.47
SFXN3-207ENST00000489434 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
SFXN3-207ENST00000489434 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
SFXN3-207ENST00000489434 PDE6GP18545 87 aa5.84□□□□□ -1.47
SFXN3-207ENST00000489434 A0A1B0GVX0 72 aa5.82□□□□□ -1.48
SFXN3-207ENST00000489434 ZCCHC13Q8WW36 166 aaKnown RBP5.82□□□□□ -1.48
SFXN3-207ENST00000489434 SPINK7P58062 85 aa5.81□□□□□ -1.48
SFXN3-207ENST00000489434 A8MWP4 228 aa5.78□□□□□ -1.48
SFXN3-207ENST00000489434 KRTAP19-6Q3LI70 58 aa5.78□□□□□ -1.48
SFXN3-207ENST00000489434 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
SFXN3-207ENST00000489434 SYNE2Q8WXH0 6885 aaKnown RBP5.77□□□□□ -1.49
SFXN3-207ENST00000489434 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
SFXN3-207ENST00000489434 NDUFC1O43677 76 aa5.77□□□□□ -1.49
SFXN3-207ENST00000489434 DSCR8Q96T75 97 aa5.77□□□□□ -1.49
SFXN3-207ENST00000489434 NDUFB1O75438 58 aa5.76□□□□□ -1.49
SFXN3-207ENST00000489434 RBM3P98179 157 aaKnown RBP5.76□□□□□ -1.49
SFXN3-207ENST00000489434 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
SFXN3-207ENST00000489434 ATP5EP56381 51 aaPredicted RBP5.75□□□□□ -1.49
SFXN3-207ENST00000489434 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
SFXN3-207ENST00000489434 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
SFXN3-207ENST00000489434 CXCL6P80162 114 aa5.74□□□□□ -1.49
SFXN3-207ENST00000489434 KLKP1Q107X0 134 aa5.73□□□□□ -1.49
SFXN3-207ENST00000489434 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
SFXN3-207ENST00000489434 A0A1B0GW54 56 aa5.72□□□□□ -1.49
SFXN3-207ENST00000489434 Q8N9P0 234 aaPredicted RBP5.72□□□□□ -1.49
SFXN3-207ENST00000489434 KRTAP3-3Q9BYR6 98 aa5.71□□□□□ -1.5
SFXN3-207ENST00000489434 KRTAP3-2Q9BYR7 98 aa5.71□□□□□ -1.5
SFXN3-207ENST00000489434 IGKV3D-7A0A0C4DH55 119 aa5.7□□□□□ -1.5
SFXN3-207ENST00000489434 Q6ZQT0 140 aa5.69□□□□□ -1.5
SFXN3-207ENST00000489434 C8orf17Q9NRJ1 99 aa5.68□□□□□ -1.5
SFXN3-207ENST00000489434 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
SFXN3-207ENST00000489434 KRTAP6-3Q3LI67 103 aa5.66□□□□□ -1.5
SFXN3-207ENST00000489434 Q6ZVQ6 151 aa5.65□□□□□ -1.5
SFXN3-207ENST00000489434 H7BZZ5 65 aa5.64□□□□□ -1.51
SFXN3-207ENST00000489434 H1FX-AS1Q4G0G2 97 aa5.64□□□□□ -1.51
SFXN3-207ENST00000489434 A0A087WVE0 104 aa5.63□□□□□ -1.51
SFXN3-207ENST00000489434 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
SFXN3-207ENST00000489434 C20orf197Q8N268 126 aa5.62□□□□□ -1.51
SFXN3-207ENST00000489434 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
SFXN3-207ENST00000489434 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 187.6 ms