RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
USP11-211ENST00000489111 HCG22E2RYF7 251 aa5.68□□□□□ -1.5
USP11-211ENST00000489111 FLG2Q5D862 2391 aaPredicted RBP5.67□□□□□ -1.5
USP11-211ENST00000489111 KRTAP29-1A8MX34 341 aaPredicted RBP5.67□□□□□ -1.5
USP11-211ENST00000489111 CASC2Q6XLA1 102 aa5.66□□□□□ -1.5
USP11-211ENST00000489111 WFDC13Q8IUB5 93 aa5.66□□□□□ -1.5
USP11-211ENST00000489111 C8orf17Q9NRJ1 99 aa5.66□□□□□ -1.5
USP11-211ENST00000489111 C8orf87E5RJ46 101 aa5.65□□□□□ -1.5
USP11-211ENST00000489111 J3QL48 77 aa5.65□□□□□ -1.5
USP11-211ENST00000489111 RETNLBQ9BQ08 111 aa5.65□□□□□ -1.5
USP11-211ENST00000489111 HERC2O95714 4834 aa5.65□□□□□ -1.51
USP11-211ENST00000489111 MMP24-AS1A0A0U1RRL7 71 aa5.64□□□□□ -1.51
USP11-211ENST00000489111 ATOX1O00244 68 aa5.64□□□□□ -1.51
USP11-211ENST00000489111 hDV103S1A0JD37 113 aa5.63□□□□□ -1.51
USP11-211ENST00000489111 LINC00313P59037 77 aa5.62□□□□□ -1.51
USP11-211ENST00000489111 ANAPC13Q9BS18 74 aa5.62□□□□□ -1.51
USP11-211ENST00000489111 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
USP11-211ENST00000489111 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
USP11-211ENST00000489111 FP248Q71RG6 208 aaPredicted RBP5.61□□□□□ -1.51
USP11-211ENST00000489111 SMIM20Q8N5G0 67 aa5.61□□□□□ -1.51
USP11-211ENST00000489111 TMEM254Q8TBM7 123 aa5.6□□□□□ -1.51
USP11-211ENST00000489111 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.51
USP11-211ENST00000489111 NOTCH2NLQ7Z3S9 236 aa5.59□□□□□ -1.51
USP11-211ENST00000489111 MRPL34Q9BQ48 92 aaKnown RBP5.58□□□□□ -1.52
USP11-211ENST00000489111 NDUFS5O43920 106 aa5.57□□□□□ -1.52
USP11-211ENST00000489111 TNXBP22105 4242 aa5.57□□□□□ -1.52
USP11-211ENST00000489111 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
USP11-211ENST00000489111 TRAV7A0A075B6U4 112 aa5.56□□□□□ -1.52
USP11-211ENST00000489111 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
USP11-211ENST00000489111 PRR4Q16378 134 aa5.56□□□□□ -1.52
USP11-211ENST00000489111 SERP2Q8N6R1 65 aa5.56□□□□□ -1.52
USP11-211ENST00000489111 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
USP11-211ENST00000489111 OCR1Q9BZK8 76 aa5.55□□□□□ -1.52
USP11-211ENST00000489111 PCP4P48539 62 aa5.54□□□□□ -1.52
USP11-211ENST00000489111 UQCRQO14949 82 aa5.53□□□□□ -1.52
USP11-211ENST00000489111 TP53AIP1Q9HCN2 124 aa5.53□□□□□ -1.52
USP11-211ENST00000489111 DMBT1Q9UGM3 2413 aaPredicted RBP5.52□□□□□ -1.53
USP11-211ENST00000489111 KRTAP16-1A8MUX0 517 aa5.52□□□□□ -1.53
USP11-211ENST00000489111 COX7CP15954 63 aa5.51□□□□□ -1.53
USP11-211ENST00000489111 Q8N9P0 234 aaPredicted RBP5.5□□□□□ -1.53
USP11-211ENST00000489111 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
USP11-211ENST00000489111 TRAV22A0A0B4J277 110 aa5.48□□□□□ -1.53
USP11-211ENST00000489111 MP68P56378 58 aa5.48□□□□□ -1.53
USP11-211ENST00000489111 C5orf47Q569G3 176 aa5.48□□□□□ -1.53
USP11-211ENST00000489111 H0Y9P7 68 aa5.47□□□□□ -1.53
USP11-211ENST00000489111 C20orf166-AS1Q96NR2 134 aa5.47□□□□□ -1.53
USP11-211ENST00000489111 A8MUU9 505 aa5.46□□□□□ -1.54
USP11-211ENST00000489111 CCDC179H3BU77 68 aa5.46□□□□□ -1.54
USP11-211ENST00000489111 TPRXLQ17RH7 258 aa5.46□□□□□ -1.54
USP11-211ENST00000489111 C20orf197Q8N268 126 aa5.46□□□□□ -1.54
USP11-211ENST00000489111 Q75L30 129 aa5.44□□□□□ -1.54
USP11-211ENST00000489111 H3BPC8 53 aa5.43□□□□□ -1.54
USP11-211ENST00000489111 XP32Q5T750 250 aa5.43□□□□□ -1.54
USP11-211ENST00000489111 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
USP11-211ENST00000489111 LINC00208Q96KT6 92 aa5.42□□□□□ -1.54
USP11-211ENST00000489111 SNURFQ9Y675 71 aa5.42□□□□□ -1.54
USP11-211ENST00000489111 A0A0U1RQV1 116 aa5.41□□□□□ -1.54
USP11-211ENST00000489111 Q5W150 140 aa5.41□□□□□ -1.54
USP11-211ENST00000489111 C1orf64Q8NEQ6 169 aa5.41□□□□□ -1.54
USP11-211ENST00000489111 LOC101927531A0A1B0GV80 90 aa5.4□□□□□ -1.54
USP11-211ENST00000489111 RPL37P61927 97 aaKnown RBP5.4□□□□□ -1.54
USP11-211ENST00000489111 KLKP1Q107X0 134 aa5.4□□□□□ -1.54
USP11-211ENST00000489111 ATP11AUNQ6ZP68 121 aa5.4□□□□□ -1.54
USP11-211ENST00000489111 PCLOQ9Y6V0 5065 aa5.39□□□□□ -1.55
USP11-211ENST00000489111 LCE2BO14633 110 aa5.39□□□□□ -1.55
USP11-211ENST00000489111 NDUFC1O43677 76 aa5.37□□□□□ -1.55
USP11-211ENST00000489111 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
USP11-211ENST00000489111 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
USP11-211ENST00000489111 C7orf65Q6ZTY9 151 aa5.34□□□□□ -1.55
USP11-211ENST00000489111 CYSTM1Q9H1C7 97 aa5.34□□□□□ -1.55
USP11-211ENST00000489111 PCOTHQ58A44 107 aa5.32□□□□□ -1.56
USP11-211ENST00000489111 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
USP11-211ENST00000489111 H7BZZ5 65 aa5.31□□□□□ -1.56
USP11-211ENST00000489111 SEC61BP60468 96 aaKnown RBP5.3□□□□□ -1.56
USP11-211ENST00000489111 TMEM258P61165 79 aa5.29□□□□□ -1.56
USP11-211ENST00000489111 SPINK7P58062 85 aa5.28□□□□□ -1.56
USP11-211ENST00000489111 FAM236DA0A1B0GTK5 79 aa5.26□□□□□ -1.57
USP11-211ENST00000489111 FAM236CP0DP71 79 aa5.26□□□□□ -1.57
USP11-211ENST00000489111 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
USP11-211ENST00000489111 SPANXA2-OT1Q8N9U9 137 aa5.25□□□□□ -1.57
USP11-211ENST00000489111 HERC1Q15751 4861 aa5.24□□□□□ -1.57
USP11-211ENST00000489111 HRES1P13985 223 aa5.24□□□□□ -1.57
USP11-211ENST00000489111 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
USP11-211ENST00000489111 C4orf26Q17RF5 130 aa5.2□□□□□ -1.58
USP11-211ENST00000489111 LPAP08519 4548 aa5.19□□□□□ -1.58
USP11-211ENST00000489111 LOC100996750A0A140TA64 210 aa5.19□□□□□ -1.58
USP11-211ENST00000489111 KRTAP4-6Q9BYQ5 205 aa5.19□□□□□ -1.58
USP11-211ENST00000489111 DMAC1Q96GE9 116 aa5.16□□□□□ -1.58
USP11-211ENST00000489111 A8MUN3 132 aa5.15□□□□□ -1.59
USP11-211ENST00000489111 LRP2P98164 4655 aa5.15□□□□□ -1.59
USP11-211ENST00000489111 COX6B2Q6YFQ2 88 aa5.14□□□□□ -1.59
USP11-211ENST00000489111 RBM12B-AS1Q9P1G2 102 aa5.14□□□□□ -1.59
USP11-211ENST00000489111 ACYP2P14621 99 aa5.13□□□□□ -1.59
USP11-211ENST00000489111 SERP1Q9Y6X1 66 aa5.13□□□□□ -1.59
USP11-211ENST00000489111 COA5Q86WW8 74 aa5.1□□□□□ -1.59
USP11-211ENST00000489111 KRTAP4-1Q9BYQ7 146 aa5.1□□□□□ -1.59
USP11-211ENST00000489111 CHKB-CPT1BH3BT56 60 aa5.09□□□□□ -1.59
USP11-211ENST00000489111 MPLKIPQ8TAP9 179 aa5.09□□□□□ -1.59
USP11-211ENST00000489111 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
USP11-211ENST00000489111 LCE2AQ5TA79 106 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms