RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 PRR26Q8N8Z3 221 aa11.65□□□□□ -0.54
ATP1A1-208ENST00000488733 PKHD1L1Q86WI1 4243 aa11.63□□□□□ -0.55
ATP1A1-208ENST00000488733 SPAG11AQ6PDA7 123 aa11.62□□□□□ -0.55
ATP1A1-208ENST00000488733 MMP24-AS1A0A0U1RRL7 71 aa11.61□□□□□ -0.55
ATP1A1-208ENST00000488733 C8orf17Q9NRJ1 99 aa11.6□□□□□ -0.55
ATP1A1-208ENST00000488733 BIRC6Q9NR09 4857 aa11.59□□□□□ -0.55
ATP1A1-208ENST00000488733 IGHV6-1A0A0B4J1U7 121 aa11.59□□□□□ -0.55
ATP1A1-208ENST00000488733 LINC00304Q8N9R0 145 aa11.59□□□□□ -0.55
ATP1A1-208ENST00000488733 hDV103S1A0JD37 113 aa11.58□□□□□ -0.56
ATP1A1-208ENST00000488733 RPS29P62273 56 aaKnown RBP11.58□□□□□ -0.56
ATP1A1-208ENST00000488733 C20orf197Q8N268 126 aa11.58□□□□□ -0.56
ATP1A1-208ENST00000488733 C1orf195Q5TG92 126 aa11.57□□□□□ -0.56
ATP1A1-208ENST00000488733 KLKP1Q107X0 134 aa11.53□□□□□ -0.56
ATP1A1-208ENST00000488733 C8orf87E5RJ46 101 aa11.52□□□□□ -0.57
ATP1A1-208ENST00000488733 C5orf47Q569G3 176 aa11.52□□□□□ -0.57
ATP1A1-208ENST00000488733 TMEM254Q8TBM7 123 aa11.52□□□□□ -0.57
ATP1A1-208ENST00000488733 MRPL34Q9BQ48 92 aaKnown RBP11.47□□□□□ -0.57
ATP1A1-208ENST00000488733 CYSTM1Q9H1C7 97 aa11.47□□□□□ -0.57
ATP1A1-208ENST00000488733 SNURFQ9Y675 71 aa11.46□□□□□ -0.57
ATP1A1-208ENST00000488733 TP53AIP1Q9HCN2 124 aa11.46□□□□□ -0.58
ATP1A1-208ENST00000488733 FLG2Q5D862 2391 aaPredicted RBP11.46□□□□□ -0.58
ATP1A1-208ENST00000488733 A0A0U1RQV1 116 aa11.45□□□□□ -0.58
ATP1A1-208ENST00000488733 NOTCH2NLQ7Z3S9 236 aa11.45□□□□□ -0.58
ATP1A1-208ENST00000488733 LRP1Q07954 4544 aaKnown RBP11.44□□□□□ -0.58
ATP1A1-208ENST00000488733 NDUFC1O43677 76 aa11.44□□□□□ -0.58
ATP1A1-208ENST00000488733 KRTAP4-5Q9BYR2 181 aa11.43□□□□□ -0.58
ATP1A1-208ENST00000488733 LINC00313P59037 77 aa11.43□□□□□ -0.58
ATP1A1-208ENST00000488733 HERC2O95714 4834 aa11.42□□□□□ -0.58
ATP1A1-208ENST00000488733 MP68P56378 58 aa11.42□□□□□ -0.58
ATP1A1-208ENST00000488733 TMEM258P61165 79 aa11.4□□□□□ -0.58
ATP1A1-208ENST00000488733 FAT3Q8TDW7 4589 aa11.4□□□□□ -0.59
ATP1A1-208ENST00000488733 NDUFS5O43920 106 aa11.38□□□□□ -0.59
ATP1A1-208ENST00000488733 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
ATP1A1-208ENST00000488733 H3BPC8 53 aa11.38□□□□□ -0.59
ATP1A1-208ENST00000488733 H7BZZ5 65 aa11.38□□□□□ -0.59
ATP1A1-208ENST00000488733 MYCBP2O75592 4640 aa11.36□□□□□ -0.59
ATP1A1-208ENST00000488733 H0Y9P7 68 aa11.35□□□□□ -0.59
ATP1A1-208ENST00000488733 TRAV22A0A0B4J277 110 aa11.35□□□□□ -0.59
ATP1A1-208ENST00000488733 TNXBP22105 4242 aa11.34□□□□□ -0.59
ATP1A1-208ENST00000488733 ZCCHC13Q8WW36 166 aaKnown RBP11.34□□□□□ -0.59
ATP1A1-208ENST00000488733 LINC00208Q96KT6 92 aa11.31□□□□□ -0.6
ATP1A1-208ENST00000488733 ABCA13Q86UQ4 5058 aa11.29□□□□□ -0.6
ATP1A1-208ENST00000488733 OXTP01178 125 aa11.29□□□□□ -0.6
ATP1A1-208ENST00000488733 Q8N9P0 234 aaPredicted RBP11.29□□□□□ -0.6
ATP1A1-208ENST00000488733 MT1HL1P0DM35 61 aa11.28□□□□□ -0.6
ATP1A1-208ENST00000488733 KRTAP16-1A8MUX0 517 aa11.26□□□□□ -0.61
ATP1A1-208ENST00000488733 C1orf64Q8NEQ6 169 aa11.26□□□□□ -0.61
ATP1A1-208ENST00000488733 FAM236DA0A1B0GTK5 79 aa11.24□□□□□ -0.61
ATP1A1-208ENST00000488733 FAM236CP0DP71 79 aa11.24□□□□□ -0.61
ATP1A1-208ENST00000488733 ATP5EP56381 51 aaPredicted RBP11.22□□□□□ -0.61
ATP1A1-208ENST00000488733 DMBT1Q9UGM3 2413 aaPredicted RBP11.19□□□□□ -0.62
ATP1A1-208ENST00000488733 KRTAP13-3Q3SY46 172 aa11.16□□□□□ -0.62
ATP1A1-208ENST00000488733 Q5W150 140 aa11.16□□□□□ -0.62
ATP1A1-208ENST00000488733 RETNLBQ9BQ08 111 aa11.15□□□□□ -0.62
ATP1A1-208ENST00000488733 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
ATP1A1-208ENST00000488733 RPS28P62857 69 aaKnown RBP11.12□□□□□ -0.63
ATP1A1-208ENST00000488733 FP248Q71RG6 208 aaPredicted RBP11.1□□□□□ -0.63
ATP1A1-208ENST00000488733 SPANXA2-OT1Q8N9U9 137 aa11.08□□□□□ -0.64
ATP1A1-208ENST00000488733 C9orf92A6NGG3 77 aa11.06□□□□□ -0.64
ATP1A1-208ENST00000488733 J3QL48 77 aa11.06□□□□□ -0.64
ATP1A1-208ENST00000488733 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
ATP1A1-208ENST00000488733 C20orf166-AS1Q96NR2 134 aa11.04□□□□□ -0.64
ATP1A1-208ENST00000488733 CYP4F30PQ9H0H9 118 aa11.03□□□□□ -0.64
ATP1A1-208ENST00000488733 A8MUU9 505 aa11.02□□□□□ -0.65
ATP1A1-208ENST00000488733 PCOTHQ58A44 107 aa11.01□□□□□ -0.65
ATP1A1-208ENST00000488733 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
ATP1A1-208ENST00000488733 IGKV2-30P06310 120 aa10.98□□□□□ -0.65
ATP1A1-208ENST00000488733 PCLOQ9Y6V0 5065 aa10.98□□□□□ -0.65
ATP1A1-208ENST00000488733 PRR4Q16378 134 aa10.94□□□□□ -0.66
ATP1A1-208ENST00000488733 Q75L30 129 aa10.92□□□□□ -0.66
ATP1A1-208ENST00000488733 IGKV2D-30A0A075B6S6 120 aa10.88□□□□□ -0.67
ATP1A1-208ENST00000488733 C7orf65Q6ZTY9 151 aa10.85□□□□□ -0.67
ATP1A1-208ENST00000488733 HRES1P13985 223 aa10.84□□□□□ -0.67
ATP1A1-208ENST00000488733 SMIM26A0A096LP01 95 aa10.8□□□□□ -0.68
ATP1A1-208ENST00000488733 XP32Q5T750 250 aa10.78□□□□□ -0.68
ATP1A1-208ENST00000488733 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
ATP1A1-208ENST00000488733 ATP11AUNQ6ZP68 121 aa10.77□□□□□ -0.69
ATP1A1-208ENST00000488733 TPRXLQ17RH7 258 aa10.74□□□□□ -0.69
ATP1A1-208ENST00000488733 COA5Q86WW8 74 aa10.72□□□□□ -0.69
ATP1A1-208ENST00000488733 DMAC1Q96GE9 116 aa10.72□□□□□ -0.69
ATP1A1-208ENST00000488733 ACYP2P14621 99 aa10.71□□□□□ -0.69
ATP1A1-208ENST00000488733 SPINK7P58062 85 aa10.69□□□□□ -0.7
ATP1A1-208ENST00000488733 HERC1Q15751 4861 aa10.68□□□□□ -0.7
ATP1A1-208ENST00000488733 LPAP08519 4548 aa10.61□□□□□ -0.71
ATP1A1-208ENST00000488733 A8MUN3 132 aa10.6□□□□□ -0.71
ATP1A1-208ENST00000488733 C4orf26Q17RF5 130 aa10.58□□□□□ -0.72
ATP1A1-208ENST00000488733 Q1T7F1 81 aa10.55□□□□□ -0.72
ATP1A1-208ENST00000488733 HMCN2Q8NDA2 5059 aa10.55□□□□□ -0.72
ATP1A1-208ENST00000488733 MPLKIPQ8TAP9 179 aa10.54□□□□□ -0.72
ATP1A1-208ENST00000488733 CHKB-CPT1BH3BT56 60 aa10.53□□□□□ -0.72
ATP1A1-208ENST00000488733 V9GYY9 64 aa10.53□□□□□ -0.72
ATP1A1-208ENST00000488733 LRP2P98164 4655 aa10.53□□□□□ -0.72
ATP1A1-208ENST00000488733 COX6B2Q6YFQ2 88 aa10.47□□□□□ -0.73
ATP1A1-208ENST00000488733 KRTAP3-1Q9BYR8 98 aa10.42□□□□□ -0.74
ATP1A1-208ENST00000488733 SEC61BP60468 96 aaKnown RBP10.39□□□□□ -0.75
ATP1A1-208ENST00000488733 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
ATP1A1-208ENST00000488733 SPTSSBQ8NFR3 76 aa10.33□□□□□ -0.76
ATP1A1-208ENST00000488733 PSPHP1O15172 72 aa10.3□□□□□ -0.76
ATP1A1-208ENST00000488733 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
ATP1A1-208ENST00000488733 MUC17Q685J3 4493 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms