RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 RPS28P62857 69 aaKnown RBP3.89□□□□□ -1.79
RN7SL561P-201ENST00000488553 ZCCHC13Q8WW36 166 aaKnown RBP3.89□□□□□ -1.79
RN7SL561P-201ENST00000488553 IGHV6-1A0A0B4J1U7 121 aa3.88□□□□□ -1.79
RN7SL561P-201ENST00000488553 C1orf195Q5TG92 126 aa3.88□□□□□ -1.79
RN7SL561P-201ENST00000488553 NOTCH2NLQ7Z3S9 236 aa3.87□□□□□ -1.79
RN7SL561P-201ENST00000488553 TYMSOSQ8TAI1 123 aa3.87□□□□□ -1.79
RN7SL561P-201ENST00000488553 SPINK1P00995 79 aa3.86□□□□□ -1.79
RN7SL561P-201ENST00000488553 C4orf48Q5BLP8 95 aa3.86□□□□□ -1.79
RN7SL561P-201ENST00000488553 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
RN7SL561P-201ENST00000488553 TP53AIP1Q9HCN2 124 aa3.86□□□□□ -1.79
RN7SL561P-201ENST00000488553 DYNC1H1Q14204 4646 aaKnown RBP3.86□□□□□ -1.79
RN7SL561P-201ENST00000488553 FAM236DA0A1B0GTK5 79 aa3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 C8orf87E5RJ46 101 aa3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 H3BPC8 53 aa3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 FAM236CP0DP71 79 aa3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 MP68P56378 58 aa3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 MRPL34Q9BQ48 92 aaKnown RBP3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 LIMD2Q9BT23 127 aa3.85□□□□□ -1.79
RN7SL561P-201ENST00000488553 H0Y9P7 68 aa3.84□□□□□ -1.79
RN7SL561P-201ENST00000488553 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.79
RN7SL561P-201ENST00000488553 SPAG11AQ6PDA7 123 aa3.84□□□□□ -1.79
RN7SL561P-201ENST00000488553 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
RN7SL561P-201ENST00000488553 LINC00313P59037 77 aa3.83□□□□□ -1.8
RN7SL561P-201ENST00000488553 LINC00208Q96KT6 92 aa3.83□□□□□ -1.8
RN7SL561P-201ENST00000488553 TRAV22A0A0B4J277 110 aa3.82□□□□□ -1.8
RN7SL561P-201ENST00000488553 LINC00304Q8N9R0 145 aa3.82□□□□□ -1.8
RN7SL561P-201ENST00000488553 C1orf64Q8NEQ6 169 aa3.82□□□□□ -1.8
RN7SL561P-201ENST00000488553 SERP1Q9Y6X1 66 aa3.82□□□□□ -1.8
RN7SL561P-201ENST00000488553 UBR4Q5T4S7 5183 aa3.81□□□□□ -1.8
RN7SL561P-201ENST00000488553 FAM229AH3BQW9 127 aa3.81□□□□□ -1.8
RN7SL561P-201ENST00000488553 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
RN7SL561P-201ENST00000488553 PKHD1P08F94 4074 aa3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 APOBP04114 4563 aaKnown RBP3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 KRTAP16-1A8MUX0 517 aa3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 NDUFS5O43920 106 aa3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 OXTP01178 125 aa3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 KRTAP13-3Q3SY46 172 aa3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 Q8N9P0 234 aaPredicted RBP3.8□□□□□ -1.8
RN7SL561P-201ENST00000488553 Q5W150 140 aa3.79□□□□□ -1.8
RN7SL561P-201ENST00000488553 HERC2O95714 4834 aa3.78□□□□□ -1.8
RN7SL561P-201ENST00000488553 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
RN7SL561P-201ENST00000488553 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
RN7SL561P-201ENST00000488553 CYP4F30PQ9H0H9 118 aa3.77□□□□□ -1.81
RN7SL561P-201ENST00000488553 LOC101927531A0A1B0GV80 90 aa3.75□□□□□ -1.81
RN7SL561P-201ENST00000488553 Q5VSD8 79 aa3.75□□□□□ -1.81
RN7SL561P-201ENST00000488553 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
RN7SL561P-201ENST00000488553 FAT1Q14517 4588 aa3.74□□□□□ -1.81
RN7SL561P-201ENST00000488553 Q8N1X5 172 aa3.74□□□□□ -1.81
RN7SL561P-201ENST00000488553 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
RN7SL561P-201ENST00000488553 PKHD1L1Q86WI1 4243 aa3.72□□□□□ -1.81
RN7SL561P-201ENST00000488553 PRR4Q16378 134 aa3.72□□□□□ -1.81
RN7SL561P-201ENST00000488553 PCOTHQ58A44 107 aa3.72□□□□□ -1.81
RN7SL561P-201ENST00000488553 IGKV2-30P06310 120 aa3.7□□□□□ -1.82
RN7SL561P-201ENST00000488553 FP248Q71RG6 208 aaPredicted RBP3.7□□□□□ -1.82
RN7SL561P-201ENST00000488553 RETNLBQ9BQ08 111 aa3.7□□□□□ -1.82
RN7SL561P-201ENST00000488553 A8MUU9 505 aa3.69□□□□□ -1.82
RN7SL561P-201ENST00000488553 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
RN7SL561P-201ENST00000488553 HSPG2P98160 4391 aa3.68□□□□□ -1.82
RN7SL561P-201ENST00000488553 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
RN7SL561P-201ENST00000488553 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
RN7SL561P-201ENST00000488553 HRES1P13985 223 aa3.67□□□□□ -1.82
RN7SL561P-201ENST00000488553 C4orf26Q17RF5 130 aa3.66□□□□□ -1.82
RN7SL561P-201ENST00000488553 COA5Q86WW8 74 aa3.65□□□□□ -1.83
RN7SL561P-201ENST00000488553 Q1T7F1 81 aa3.64□□□□□ -1.83
RN7SL561P-201ENST00000488553 KIAA1109Q2LD37 5005 aa3.63□□□□□ -1.83
RN7SL561P-201ENST00000488553 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
RN7SL561P-201ENST00000488553 Q75L30 129 aa3.63□□□□□ -1.83
RN7SL561P-201ENST00000488553 MPLKIPQ8TAP9 179 aa3.63□□□□□ -1.83
RN7SL561P-201ENST00000488553 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
RN7SL561P-201ENST00000488553 TNXBP22105 4242 aa3.62□□□□□ -1.83
RN7SL561P-201ENST00000488553 ACYP2P14621 99 aa3.62□□□□□ -1.83
RN7SL561P-201ENST00000488553 FLG2Q5D862 2391 aaPredicted RBP3.62□□□□□ -1.83
RN7SL561P-201ENST00000488553 C7orf65Q6ZTY9 151 aa3.61□□□□□ -1.83
RN7SL561P-201ENST00000488553 KRTAP4-5Q9BYR2 181 aa3.6□□□□□ -1.83
RN7SL561P-201ENST00000488553 V9GYY9 64 aa3.6□□□□□ -1.83
RN7SL561P-201ENST00000488553 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
RN7SL561P-201ENST00000488553 LRP1Q07954 4544 aaKnown RBP3.59□□□□□ -1.83
RN7SL561P-201ENST00000488553 SPINK7P58062 85 aa3.58□□□□□ -1.84
RN7SL561P-201ENST00000488553 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
RN7SL561P-201ENST00000488553 XP32Q5T750 250 aa3.57□□□□□ -1.84
RN7SL561P-201ENST00000488553 HERC1Q15751 4861 aa3.57□□□□□ -1.84
RN7SL561P-201ENST00000488553 A8MUN3 132 aa3.56□□□□□ -1.84
RN7SL561P-201ENST00000488553 ATP11AUNQ6ZP68 121 aa3.56□□□□□ -1.84
RN7SL561P-201ENST00000488553 LINC01558Q9Y6Z2 57 aa3.56□□□□□ -1.84
RN7SL561P-201ENST00000488553 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
RN7SL561P-201ENST00000488553 ABCA13Q86UQ4 5058 aa3.54□□□□□ -1.84
RN7SL561P-201ENST00000488553 CHKB-CPT1BH3BT56 60 aa3.54□□□□□ -1.84
RN7SL561P-201ENST00000488553 PSPHP1O15172 72 aa3.54□□□□□ -1.84
RN7SL561P-201ENST00000488553 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
RN7SL561P-201ENST00000488553 Q5VV11 94 aa3.53□□□□□ -1.84
RN7SL561P-201ENST00000488553 TPRXLQ17RH7 258 aa3.52□□□□□ -1.85
RN7SL561P-201ENST00000488553 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
RN7SL561P-201ENST00000488553 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
RN7SL561P-201ENST00000488553 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
RN7SL561P-201ENST00000488553 DMBT1Q9UGM3 2413 aaPredicted RBP3.51□□□□□ -1.85
RN7SL561P-201ENST00000488553 J3QL48 77 aa3.47□□□□□ -1.85
RN7SL561P-201ENST00000488553 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
RN7SL561P-201ENST00000488553 MYCBP2O75592 4640 aa3.47□□□□□ -1.85
RN7SL561P-201ENST00000488553 SPTSSBQ8NFR3 76 aa3.46□□□□□ -1.86
RN7SL561P-201ENST00000488553 BRK1Q8WUW1 75 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms