RNA–Protein interactions for RNA: ENST00000488196.5

STRADB-209, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-209ENST00000488196 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
STRADB-209ENST00000488196 C21orf62-AS1Q17RA5 79 aa12.09□□□□□ -0.47
STRADB-209ENST00000488196 A0A1B0GVX0 72 aa12.08□□□□□ -0.48
STRADB-209ENST00000488196 A0A1W2PPM0 123 aa12.07□□□□□ -0.48
STRADB-209ENST00000488196 PDE6GP18545 87 aa12.06□□□□□ -0.48
STRADB-209ENST00000488196 J3KT08 172 aa12.04□□□□□ -0.48
STRADB-209ENST00000488196 MTURNQ8N3F0 131 aa12.04□□□□□ -0.48
STRADB-209ENST00000488196 C8orf87E5RJ46 101 aa12.03□□□□□ -0.48
STRADB-209ENST00000488196 FLGP20930 4061 aaPredicted RBP12.01□□□□□ -0.49
STRADB-209ENST00000488196 A0A1B0GW54 56 aa12.01□□□□□ -0.49
STRADB-209ENST00000488196 H3BT86 120 aa11.99□□□□□ -0.49
STRADB-209ENST00000488196 M0R2T5 61 aa11.98□□□□□ -0.49
STRADB-209ENST00000488196 NDUFB1O75438 58 aa11.95□□□□□ -0.5
STRADB-209ENST00000488196 KRTAP10-6P60371 365 aaPredicted RBP11.94□□□□□ -0.5
STRADB-209ENST00000488196 A8MWP4 228 aa11.92□□□□□ -0.5
STRADB-209ENST00000488196 LORP23490 312 aaPredicted RBP11.92□□□□□ -0.5
STRADB-209ENST00000488196 SPCS1Q9Y6A9 102 aa11.92□□□□□ -0.5
STRADB-209ENST00000488196 NREPQ16612 68 aa11.91□□□□□ -0.5
STRADB-209ENST00000488196 IGKV3D-7A0A0C4DH55 119 aa11.9□□□□□ -0.5
STRADB-209ENST00000488196 LCE2DQ5TA82 110 aaPredicted RBP11.88□□□□□ -0.51
STRADB-209ENST00000488196 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
STRADB-209ENST00000488196 COL5A1-AS1Q5SY13 56 aa11.87□□□□□ -0.51
STRADB-209ENST00000488196 SMCPP49901 116 aaPredicted RBP11.83□□□□□ -0.52
STRADB-209ENST00000488196 PRR15Q8IV56 129 aa11.83□□□□□ -0.52
STRADB-209ENST00000488196 Q8N9P0 234 aaPredicted RBP11.83□□□□□ -0.52
STRADB-209ENST00000488196 ZCCHC13Q8WW36 166 aaKnown RBP11.83□□□□□ -0.52
STRADB-209ENST00000488196 HRES1P13985 223 aa11.81□□□□□ -0.52
STRADB-209ENST00000488196 Q6ZVQ6 151 aa11.78□□□□□ -0.52
STRADB-209ENST00000488196 FAM236DA0A1B0GTK5 79 aa11.76□□□□□ -0.53
STRADB-209ENST00000488196 FAM236CP0DP71 79 aa11.76□□□□□ -0.53
STRADB-209ENST00000488196 MPLKIPQ8TAP9 179 aa11.76□□□□□ -0.53
STRADB-209ENST00000488196 MMP24-AS1A0A0U1RRL7 71 aa11.74□□□□□ -0.53
STRADB-209ENST00000488196 PRO0461Q9UI25 63 aa11.74□□□□□ -0.53
STRADB-209ENST00000488196 K7EP34 96 aa11.73□□□□□ -0.53
STRADB-209ENST00000488196 K7EQZ3 153 aa11.73□□□□□ -0.53
STRADB-209ENST00000488196 RBM12B-AS1Q9P1G2 102 aa11.73□□□□□ -0.53
STRADB-209ENST00000488196 KRTAP9-6A0A140TA67 174 aa11.71□□□□□ -0.53
STRADB-209ENST00000488196 PCP4L1A6NKN8 68 aa11.71□□□□□ -0.53
STRADB-209ENST00000488196 BPY2O14599 106 aa11.7□□□□□ -0.54
STRADB-209ENST00000488196 SPINK7P58062 85 aa11.7□□□□□ -0.54
STRADB-209ENST00000488196 TMEM254Q8TBM7 123 aa11.69□□□□□ -0.54
STRADB-209ENST00000488196 MRPL34Q9BQ48 92 aaKnown RBP11.68□□□□□ -0.54
STRADB-209ENST00000488196 hDV103S1A0JD37 113 aa11.66□□□□□ -0.54
STRADB-209ENST00000488196 Q8N9L7 120 aa11.62□□□□□ -0.55
STRADB-209ENST00000488196 NDUFS5O43920 106 aa11.59□□□□□ -0.55
STRADB-209ENST00000488196 GTF2H5Q6ZYL4 71 aa11.59□□□□□ -0.55
STRADB-209ENST00000488196 LINC00846Q9NV44 126 aa11.59□□□□□ -0.55
STRADB-209ENST00000488196 WFDC13Q8IUB5 93 aa11.56□□□□□ -0.56
STRADB-209ENST00000488196 KRTAP9-8Q9BYQ0 159 aa11.56□□□□□ -0.56
STRADB-209ENST00000488196 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
STRADB-209ENST00000488196 CRCT1Q9UGL9 99 aa11.52□□□□□ -0.57
STRADB-209ENST00000488196 FSIP2Q5CZC0 6907 aa11.52□□□□□ -0.57
STRADB-209ENST00000488196 CASC2Q6XLA1 102 aa11.51□□□□□ -0.57
STRADB-209ENST00000488196 F8W1H4 67 aa11.5□□□□□ -0.57
STRADB-209ENST00000488196 ETDBQ3ZM63 59 aa11.48□□□□□ -0.57
STRADB-209ENST00000488196 Q5W150 140 aa11.47□□□□□ -0.57
STRADB-209ENST00000488196 HCG22E2RYF7 251 aa11.44□□□□□ -0.58
STRADB-209ENST00000488196 MT2AP02795 61 aa11.42□□□□□ -0.58
STRADB-209ENST00000488196 IGKV2D-30A0A075B6S6 120 aa11.41□□□□□ -0.58
STRADB-209ENST00000488196 IGKV2-30P06310 120 aa11.41□□□□□ -0.58
STRADB-209ENST00000488196 MT1FP04733 61 aa11.34□□□□□ -0.59
STRADB-209ENST00000488196 C7orf65Q6ZTY9 151 aa11.34□□□□□ -0.59
STRADB-209ENST00000488196 CXCL6P80162 114 aa11.33□□□□□ -0.6
STRADB-209ENST00000488196 KRTAP10-10P60014 251 aa11.28□□□□□ -0.6
STRADB-209ENST00000488196 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.61
STRADB-209ENST00000488196 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
STRADB-209ENST00000488196 KRTAP9-3Q9BYQ3 159 aa11.2□□□□□ -0.62
STRADB-209ENST00000488196 ACYP1P07311 99 aa11.16□□□□□ -0.62
STRADB-209ENST00000488196 TP53AIP1Q9HCN2 124 aa11.14□□□□□ -0.63
STRADB-209ENST00000488196 USH2AO75445 5202 aa11.14□□□□□ -0.63
STRADB-209ENST00000488196 LCE2BO14633 110 aa11.13□□□□□ -0.63
STRADB-209ENST00000488196 FAM240AA0A1B0GVK7 77 aa11.11□□□□□ -0.63
STRADB-209ENST00000488196 A0A1B0GV90 55 aa11.07□□□□□ -0.64
STRADB-209ENST00000488196 KRTAP3-1Q9BYR8 98 aa11.04□□□□□ -0.64
STRADB-209ENST00000488196 ATP5EP2Q5VTU8 51 aa11.03□□□□□ -0.64
STRADB-209ENST00000488196 HIST1H4AP62805 103 aaKnown RBP11.01□□□□□ -0.65
STRADB-209ENST00000488196 SSPOA2VEC9 5147 aa11.01□□□□□ -0.65
STRADB-209ENST00000488196 C1orf64Q8NEQ6 169 aa11□□□□□ -0.65
STRADB-209ENST00000488196 CYP4F30PQ9H0H9 118 aa10.94□□□□□ -0.66
STRADB-209ENST00000488196 TRAV22A0A0B4J277 110 aa10.93□□□□□ -0.66
STRADB-209ENST00000488196 C5orf47Q569G3 176 aa10.92□□□□□ -0.66
STRADB-209ENST00000488196 LINC00643Q86TS7 51 aa10.92□□□□□ -0.66
STRADB-209ENST00000488196 S4R3F8 94 aa10.91□□□□□ -0.66
STRADB-209ENST00000488196 A0A087WVE0 104 aa10.9□□□□□ -0.66
STRADB-209ENST00000488196 KRTAP19-1Q8IUB9 90 aa10.88□□□□□ -0.67
STRADB-209ENST00000488196 LOC101927531A0A1B0GV80 90 aa10.86□□□□□ -0.67
STRADB-209ENST00000488196 UQCRQO14949 82 aa10.85□□□□□ -0.67
STRADB-209ENST00000488196 LCA10Q71F78 164 aa10.85□□□□□ -0.67
STRADB-209ENST00000488196 H0Y9P7 68 aa10.81□□□□□ -0.68
STRADB-209ENST00000488196 CSAG1Q6PB30 78 aa10.8□□□□□ -0.68
STRADB-209ENST00000488196 FCGBPQ9Y6R7 5405 aaPredicted RBP10.76□□□□□ -0.69
STRADB-209ENST00000488196 ATOX1O00244 68 aa10.75□□□□□ -0.69
STRADB-209ENST00000488196 FAM236AA0A1B0GUQ0 79 aa10.73□□□□□ -0.69
STRADB-209ENST00000488196 FAM236BA0A1B0GV22 79 aa10.73□□□□□ -0.69
STRADB-209ENST00000488196 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.73□□□□□ -0.69
STRADB-209ENST00000488196 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
STRADB-209ENST00000488196 J3QR89 54 aa10.7□□□□□ -0.7
STRADB-209ENST00000488196 KRTAP19-6Q3LI70 58 aa10.68□□□□□ -0.7
STRADB-209ENST00000488196 OCR1Q9BZK8 76 aa10.66□□□□□ -0.7
STRADB-209ENST00000488196 LINC00208Q96KT6 92 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms