RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 RBM3P98179 157 aaKnown RBP9.7□□□□□ -0.86
CD55-209ENST00000488171 MPLKIPQ8TAP9 179 aa9.7□□□□□ -0.86
CD55-209ENST00000488171 DSCR8Q96T75 97 aa9.67□□□□□ -0.86
CD55-209ENST00000488171 FAM236DA0A1B0GTK5 79 aa9.66□□□□□ -0.86
CD55-209ENST00000488171 A0A1B0GVX0 72 aa9.66□□□□□ -0.86
CD55-209ENST00000488171 FAM236CP0DP71 79 aa9.66□□□□□ -0.86
CD55-209ENST00000488171 C8orf87E5RJ46 101 aa9.65□□□□□ -0.86
CD55-209ENST00000488171 BAALC-AS2P0C853 105 aa9.64□□□□□ -0.87
CD55-209ENST00000488171 RBM12B-AS1Q9P1G2 102 aa9.63□□□□□ -0.87
CD55-209ENST00000488171 C9JAW5 83 aa9.61□□□□□ -0.87
CD55-209ENST00000488171 MT2AP02795 61 aa9.61□□□□□ -0.87
CD55-209ENST00000488171 J3KT08 172 aa9.59□□□□□ -0.87
CD55-209ENST00000488171 Q6ZQT0 140 aa9.59□□□□□ -0.87
CD55-209ENST00000488171 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
CD55-209ENST00000488171 ZCCHC13Q8WW36 166 aaKnown RBP9.57□□□□□ -0.88
CD55-209ENST00000488171 USH2AO75445 5202 aa9.55□□□□□ -0.88
CD55-209ENST00000488171 MT1FP04733 61 aa9.54□□□□□ -0.88
CD55-209ENST00000488171 NAA38Q9BRA0 125 aaKnown RBP9.54□□□□□ -0.88
CD55-209ENST00000488171 ATXN8Q156A1 80 aa9.52□□□□□ -0.88
CD55-209ENST00000488171 Q8N9P0 234 aaPredicted RBP9.52□□□□□ -0.88
CD55-209ENST00000488171 LOC110117498A0A087WWA1 95 aa9.5□□□□□ -0.89
CD55-209ENST00000488171 JMJD7-PLA2G4BH0Y9G9 81 aa9.5□□□□□ -0.89
CD55-209ENST00000488171 NDUFB1O75438 58 aa9.5□□□□□ -0.89
CD55-209ENST00000488171 SPINK7P58062 85 aa9.5□□□□□ -0.89
CD55-209ENST00000488171 SSPOA2VEC9 5147 aa9.5□□□□□ -0.89
CD55-209ENST00000488171 M0R143 59 aa9.5□□□□□ -0.89
CD55-209ENST00000488171 A0A1B0GW54 56 aa9.48□□□□□ -0.89
CD55-209ENST00000488171 A8MWP4 228 aa9.48□□□□□ -0.89
CD55-209ENST00000488171 MTURNQ8N3F0 131 aa9.48□□□□□ -0.89
CD55-209ENST00000488171 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
CD55-209ENST00000488171 KRTAP9-3Q9BYQ3 159 aa9.47□□□□□ -0.89
CD55-209ENST00000488171 IGKV3D-7A0A0C4DH55 119 aa9.46□□□□□ -0.9
CD55-209ENST00000488171 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
CD55-209ENST00000488171 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
CD55-209ENST00000488171 PDE6GP18545 87 aa9.44□□□□□ -0.9
CD55-209ENST00000488171 C14orf132Q9NPU4 83 aa9.44□□□□□ -0.9
CD55-209ENST00000488171 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
CD55-209ENST00000488171 KRTAP4-8Q9BYQ9 185 aa9.43□□□□□ -0.9
CD55-209ENST00000488171 PCP4L1A6NKN8 68 aa9.4□□□□□ -0.9
CD55-209ENST00000488171 Q6ZVQ6 151 aa9.39□□□□□ -0.91
CD55-209ENST00000488171 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
CD55-209ENST00000488171 WFDC13Q8IUB5 93 aa9.37□□□□□ -0.91
CD55-209ENST00000488171 PRR15Q8IV56 129 aa9.37□□□□□ -0.91
CD55-209ENST00000488171 NREPQ16612 68 aa9.35□□□□□ -0.91
CD55-209ENST00000488171 KRTAP9-7A8MTY7 169 aa9.34□□□□□ -0.91
CD55-209ENST00000488171 KRTAP19-1Q8IUB9 90 aa9.34□□□□□ -0.91
CD55-209ENST00000488171 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
CD55-209ENST00000488171 TMEM254Q8TBM7 123 aa9.31□□□□□ -0.92
CD55-209ENST00000488171 MRPL34Q9BQ48 92 aaKnown RBP9.31□□□□□ -0.92
CD55-209ENST00000488171 BATFQ16520 125 aa9.29□□□□□ -0.92
CD55-209ENST00000488171 FCGBPQ9Y6R7 5405 aaPredicted RBP9.28□□□□□ -0.92
CD55-209ENST00000488171 K7EQZ3 153 aa9.26□□□□□ -0.93
CD55-209ENST00000488171 TSTD3H0UI37 97 aa9.25□□□□□ -0.93
CD55-209ENST00000488171 hDV103S1A0JD37 113 aa9.24□□□□□ -0.93
CD55-209ENST00000488171 H3BT86 120 aa9.24□□□□□ -0.93
CD55-209ENST00000488171 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
CD55-209ENST00000488171 TAX1BP3O14907 124 aa9.21□□□□□ -0.94
CD55-209ENST00000488171 A0A1W2PPM0 123 aa9.2□□□□□ -0.94
CD55-209ENST00000488171 NDUFS5O43920 106 aa9.2□□□□□ -0.94
CD55-209ENST00000488171 H1FX-AS1Q4G0G2 97 aa9.18□□□□□ -0.94
CD55-209ENST00000488171 BPY2O14599 106 aa9.17□□□□□ -0.94
CD55-209ENST00000488171 Q5W150 140 aa9.16□□□□□ -0.94
CD55-209ENST00000488171 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
CD55-209ENST00000488171 IGKV2D-30A0A075B6S6 120 aa9.12□□□□□ -0.95
CD55-209ENST00000488171 IGKV2-30P06310 120 aa9.12□□□□□ -0.95
CD55-209ENST00000488171 C7orf65Q6ZTY9 151 aa9.11□□□□□ -0.95
CD55-209ENST00000488171 Q8N9L7 120 aa9.11□□□□□ -0.95
CD55-209ENST00000488171 KRTAP4-12Q9BQ66 201 aa9.11□□□□□ -0.95
CD55-209ENST00000488171 CASC2Q6XLA1 102 aa9.08□□□□□ -0.96
CD55-209ENST00000488171 LINC00846Q9NV44 126 aa9.07□□□□□ -0.96
CD55-209ENST00000488171 HCG22E2RYF7 251 aa9.06□□□□□ -0.96
CD55-209ENST00000488171 SPCS1Q9Y6A9 102 aa9.05□□□□□ -0.96
CD55-209ENST00000488171 C4orf26Q17RF5 130 aa9□□□□□ -0.97
CD55-209ENST00000488171 LCE3BQ5TA77 95 aa8.99□□□□□ -0.97
CD55-209ENST00000488171 CXCL6P80162 114 aa8.99□□□□□ -0.97
CD55-209ENST00000488171 MACF1Q9UPN3 7388 aaKnown RBP8.97□□□□□ -0.97
CD55-209ENST00000488171 PRO0461Q9UI25 63 aa8.95□□□□□ -0.98
CD55-209ENST00000488171 UBL5Q9BZL1 73 aa8.93□□□□□ -0.98
CD55-209ENST00000488171 A0A1B0GV90 55 aa8.92□□□□□ -0.98
CD55-209ENST00000488171 KRTAP3-1Q9BYR8 98 aa8.9□□□□□ -0.98
CD55-209ENST00000488171 COL5A1-AS1Q5SY13 56 aa8.88□□□□□ -0.99
CD55-209ENST00000488171 K7EP34 96 aa8.87□□□□□ -0.99
CD55-209ENST00000488171 C5orf47Q569G3 176 aa8.87□□□□□ -0.99
CD55-209ENST00000488171 SYNE2Q8WXH0 6885 aaKnown RBP8.84□□□□□ -0.99
CD55-209ENST00000488171 S4R3F8 94 aa8.82□□□□□ -1
CD55-209ENST00000488171 C1orf64Q8NEQ6 169 aa8.81□□□□□ -1
CD55-209ENST00000488171 FAM236AA0A1B0GUQ0 79 aa8.78□□□□□ -1
CD55-209ENST00000488171 FAM236BA0A1B0GV22 79 aa8.78□□□□□ -1
CD55-209ENST00000488171 LCA10Q71F78 164 aa8.78□□□□□ -1
CD55-209ENST00000488171 KRTAP9-9Q9BYP9 154 aa8.78□□□□□ -1
CD55-209ENST00000488171 KRTAP9-4Q9BYQ2 154 aa8.78□□□□□ -1
CD55-209ENST00000488171 TP53AIP1Q9HCN2 124 aa8.77□□□□□ -1.01
CD55-209ENST00000488171 KRTAP6-3Q3LI67 103 aa8.76□□□□□ -1.01
CD55-209ENST00000488171 CSAG1Q6PB30 78 aa8.75□□□□□ -1.01
CD55-209ENST00000488171 H3BS24 57 aa8.74□□□□□ -1.01
CD55-209ENST00000488171 MT1BP07438 61 aa8.73□□□□□ -1.01
CD55-209ENST00000488171 GTF2H5Q6ZYL4 71 aa8.71□□□□□ -1.02
CD55-209ENST00000488171 F8W1H4 67 aa8.7□□□□□ -1.02
CD55-209ENST00000488171 SPRR2GQ9BYE4 73 aa8.7□□□□□ -1.02
CD55-209ENST00000488171 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 190.9 ms