RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 MTURNQ8N3F0 131 aa12.37□□□□□ -0.43
RHBDD3-205ENST00000488106 KRTAP16-1A8MUX0 517 aa12.36□□□□□ -0.43
RHBDD3-205ENST00000488106 COX6B2Q6YFQ2 88 aa12.35□□□□□ -0.43
RHBDD3-205ENST00000488106 A0A1B0GVX0 72 aa12.34□□□□□ -0.43
RHBDD3-205ENST00000488106 PDE6GP18545 87 aa12.34□□□□□ -0.43
RHBDD3-205ENST00000488106 MT1HP80294 61 aa12.33□□□□□ -0.44
RHBDD3-205ENST00000488106 H3BT86 120 aa12.31□□□□□ -0.44
RHBDD3-205ENST00000488106 J3KT08 172 aa12.31□□□□□ -0.44
RHBDD3-205ENST00000488106 A0A1B0GW54 56 aa12.28□□□□□ -0.44
RHBDD3-205ENST00000488106 C8orf87E5RJ46 101 aa12.28□□□□□ -0.44
RHBDD3-205ENST00000488106 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
RHBDD3-205ENST00000488106 FLGP20930 4061 aaPredicted RBP12.24□□□□□ -0.45
RHBDD3-205ENST00000488106 NDUFB1O75438 58 aa12.22□□□□□ -0.45
RHBDD3-205ENST00000488106 COL5A1-AS1Q5SY13 56 aa12.22□□□□□ -0.45
RHBDD3-205ENST00000488106 A8MWP4 228 aa12.19□□□□□ -0.46
RHBDD3-205ENST00000488106 NREPQ16612 68 aa12.18□□□□□ -0.46
RHBDD3-205ENST00000488106 M0R2T5 61 aa12.16□□□□□ -0.46
RHBDD3-205ENST00000488106 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
RHBDD3-205ENST00000488106 C8orf17Q9NRJ1 99 aa12.14□□□□□ -0.47
RHBDD3-205ENST00000488106 SMCPP49901 116 aaPredicted RBP12.12□□□□□ -0.47
RHBDD3-205ENST00000488106 PCP4L1A6NKN8 68 aa12.11□□□□□ -0.47
RHBDD3-205ENST00000488106 KRTAP9-6A0A140TA67 174 aa12.1□□□□□ -0.47
RHBDD3-205ENST00000488106 K7EP34 96 aa12.08□□□□□ -0.48
RHBDD3-205ENST00000488106 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
RHBDD3-205ENST00000488106 KRTAP10-6P60371 365 aaPredicted RBP12.06□□□□□ -0.48
RHBDD3-205ENST00000488106 ZCCHC13Q8WW36 166 aaKnown RBP12.06□□□□□ -0.48
RHBDD3-205ENST00000488106 Q8N9P0 234 aaPredicted RBP12.04□□□□□ -0.48
RHBDD3-205ENST00000488106 PRO0461Q9UI25 63 aa12.04□□□□□ -0.48
RHBDD3-205ENST00000488106 Q6ZVQ6 151 aa12.03□□□□□ -0.48
RHBDD3-205ENST00000488106 K7EQZ3 153 aa12.02□□□□□ -0.49
RHBDD3-205ENST00000488106 LORP23490 312 aaPredicted RBP12.02□□□□□ -0.49
RHBDD3-205ENST00000488106 FAM236DA0A1B0GTK5 79 aa12□□□□□ -0.49
RHBDD3-205ENST00000488106 FAM236CP0DP71 79 aa12□□□□□ -0.49
RHBDD3-205ENST00000488106 MMP24-AS1A0A0U1RRL7 71 aa11.99□□□□□ -0.49
RHBDD3-205ENST00000488106 BPY2O14599 106 aa11.99□□□□□ -0.49
RHBDD3-205ENST00000488106 HRES1P13985 223 aa11.99□□□□□ -0.49
RHBDD3-205ENST00000488106 LCE2DQ5TA82 110 aaPredicted RBP11.96□□□□□ -0.49
RHBDD3-205ENST00000488106 TMEM254Q8TBM7 123 aa11.95□□□□□ -0.5
RHBDD3-205ENST00000488106 RBM12B-AS1Q9P1G2 102 aa11.95□□□□□ -0.5
RHBDD3-205ENST00000488106 GTF2H5Q6ZYL4 71 aa11.94□□□□□ -0.5
RHBDD3-205ENST00000488106 MRPL34Q9BQ48 92 aaKnown RBP11.93□□□□□ -0.5
RHBDD3-205ENST00000488106 hDV103S1A0JD37 113 aa11.92□□□□□ -0.5
RHBDD3-205ENST00000488106 MPLKIPQ8TAP9 179 aa11.92□□□□□ -0.5
RHBDD3-205ENST00000488106 SPINK7P58062 85 aa11.91□□□□□ -0.5
RHBDD3-205ENST00000488106 Q8N9L7 120 aa11.9□□□□□ -0.5
RHBDD3-205ENST00000488106 NDUFS5O43920 106 aa11.88□□□□□ -0.51
RHBDD3-205ENST00000488106 LINC00846Q9NV44 126 aa11.87□□□□□ -0.51
RHBDD3-205ENST00000488106 WFDC13Q8IUB5 93 aa11.84□□□□□ -0.51
RHBDD3-205ENST00000488106 UBL5Q9BZL1 73 aa11.84□□□□□ -0.51
RHBDD3-205ENST00000488106 F8W1H4 67 aa11.82□□□□□ -0.52
RHBDD3-205ENST00000488106 ETDBQ3ZM63 59 aa11.79□□□□□ -0.52
RHBDD3-205ENST00000488106 CASC2Q6XLA1 102 aa11.78□□□□□ -0.52
RHBDD3-205ENST00000488106 CRCT1Q9UGL9 99 aa11.77□□□□□ -0.53
RHBDD3-205ENST00000488106 FSIP2Q5CZC0 6907 aa11.74□□□□□ -0.53
RHBDD3-205ENST00000488106 HCG22E2RYF7 251 aa11.71□□□□□ -0.53
RHBDD3-205ENST00000488106 Q5W150 140 aa11.68□□□□□ -0.54
RHBDD3-205ENST00000488106 KRTAP9-8Q9BYQ0 159 aa11.67□□□□□ -0.54
RHBDD3-205ENST00000488106 IGKV2D-30A0A075B6S6 120 aa11.66□□□□□ -0.54
RHBDD3-205ENST00000488106 IGKV2-30P06310 120 aa11.66□□□□□ -0.54
RHBDD3-205ENST00000488106 C7orf65Q6ZTY9 151 aa11.61□□□□□ -0.55
RHBDD3-205ENST00000488106 CXCL6P80162 114 aa11.6□□□□□ -0.55
RHBDD3-205ENST00000488106 MT2AP02795 61 aa11.55□□□□□ -0.56
RHBDD3-205ENST00000488106 ACYP1P07311 99 aa11.48□□□□□ -0.57
RHBDD3-205ENST00000488106 MT1FP04733 61 aa11.47□□□□□ -0.57
RHBDD3-205ENST00000488106 H1FX-AS1Q4G0G2 97 aa11.46□□□□□ -0.57
RHBDD3-205ENST00000488106 FAM240AA0A1B0GVK7 77 aa11.44□□□□□ -0.58
RHBDD3-205ENST00000488106 A0A1B0GV90 55 aa11.43□□□□□ -0.58
RHBDD3-205ENST00000488106 KRTAP10-10P60014 251 aa11.43□□□□□ -0.58
RHBDD3-205ENST00000488106 C4orf26Q17RF5 130 aa11.42□□□□□ -0.58
RHBDD3-205ENST00000488106 TP53AIP1Q9HCN2 124 aa11.41□□□□□ -0.58
RHBDD3-205ENST00000488106 ATP5EP2Q5VTU8 51 aa11.36□□□□□ -0.59
RHBDD3-205ENST00000488106 HIST1H4AP62805 103 aaKnown RBP11.33□□□□□ -0.6
RHBDD3-205ENST00000488106 USH2AO75445 5202 aa11.31□□□□□ -0.6
RHBDD3-205ENST00000488106 KRTAP9-3Q9BYQ3 159 aa11.29□□□□□ -0.6
RHBDD3-205ENST00000488106 TRAV22A0A0B4J277 110 aa11.22□□□□□ -0.61
RHBDD3-205ENST00000488106 LCE2BO14633 110 aa11.22□□□□□ -0.61
RHBDD3-205ENST00000488106 LINC00643Q86TS7 51 aa11.22□□□□□ -0.61
RHBDD3-205ENST00000488106 C1orf64Q8NEQ6 169 aa11.21□□□□□ -0.61
RHBDD3-205ENST00000488106 KRTAP3-1Q9BYR8 98 aa11.21□□□□□ -0.61
RHBDD3-205ENST00000488106 A0A087WVE0 104 aa11.2□□□□□ -0.62
RHBDD3-205ENST00000488106 SSPOA2VEC9 5147 aa11.2□□□□□ -0.62
RHBDD3-205ENST00000488106 CYP4F30PQ9H0H9 118 aa11.17□□□□□ -0.62
RHBDD3-205ENST00000488106 S4R3F8 94 aa11.15□□□□□ -0.62
RHBDD3-205ENST00000488106 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
RHBDD3-205ENST00000488106 C5orf47Q569G3 176 aa11.13□□□□□ -0.63
RHBDD3-205ENST00000488106 UQCRQO14949 82 aa11.11□□□□□ -0.63
RHBDD3-205ENST00000488106 H0Y9P7 68 aa11.1□□□□□ -0.63
RHBDD3-205ENST00000488106 J3QR89 54 aa11.07□□□□□ -0.64
RHBDD3-205ENST00000488106 LCA10Q71F78 164 aa11.06□□□□□ -0.64
RHBDD3-205ENST00000488106 ATOX1O00244 68 aa11.04□□□□□ -0.64
RHBDD3-205ENST00000488106 CSAG1Q6PB30 78 aa10.99□□□□□ -0.65
RHBDD3-205ENST00000488106 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.97□□□□□ -0.65
RHBDD3-205ENST00000488106 KRTAP19-1Q8IUB9 90 aa10.97□□□□□ -0.65
RHBDD3-205ENST00000488106 FAM236AA0A1B0GUQ0 79 aa10.95□□□□□ -0.66
RHBDD3-205ENST00000488106 FAM236BA0A1B0GV22 79 aa10.95□□□□□ -0.66
RHBDD3-205ENST00000488106 OCR1Q9BZK8 76 aa10.93□□□□□ -0.66
RHBDD3-205ENST00000488106 LINC00208Q96KT6 92 aa10.92□□□□□ -0.66
RHBDD3-205ENST00000488106 FCGBPQ9Y6R7 5405 aaPredicted RBP10.9□□□□□ -0.66
RHBDD3-205ENST00000488106 MP68P56378 58 aa10.88□□□□□ -0.67
RHBDD3-205ENST00000488106 KRTAP3-3Q9BYR6 98 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms