RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 A0A1B0GVX0 72 aa7.73□□□□□ -1.17
NUP188-207ENST00000487952 A8MWP4 228 aa7.72□□□□□ -1.17
NUP188-207ENST00000487952 DSCR10P59022 87 aa7.71□□□□□ -1.18
NUP188-207ENST00000487952 C8orf87E5RJ46 101 aa7.7□□□□□ -1.18
NUP188-207ENST00000487952 LINC00313P59037 77 aa7.7□□□□□ -1.18
NUP188-207ENST00000487952 XP32Q5T750 250 aa7.69□□□□□ -1.18
NUP188-207ENST00000487952 IGKV3D-7A0A0C4DH55 119 aa7.68□□□□□ -1.18
NUP188-207ENST00000487952 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
NUP188-207ENST00000487952 K7EQZ3 153 aa7.65□□□□□ -1.18
NUP188-207ENST00000487952 C8orf17Q9NRJ1 99 aa7.65□□□□□ -1.18
NUP188-207ENST00000487952 LRP2P98164 4655 aa7.64□□□□□ -1.19
NUP188-207ENST00000487952 CXCL6P80162 114 aa7.64□□□□□ -1.19
NUP188-207ENST00000487952 LPAP08519 4548 aa7.64□□□□□ -1.19
NUP188-207ENST00000487952 K7ERU9 68 aa7.63□□□□□ -1.19
NUP188-207ENST00000487952 NOTCH2NLQ7Z3S9 236 aa7.63□□□□□ -1.19
NUP188-207ENST00000487952 Q8N9L7 120 aa7.63□□□□□ -1.19
NUP188-207ENST00000487952 ATP5EP2Q5VTU8 51 aa7.62□□□□□ -1.19
NUP188-207ENST00000487952 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
NUP188-207ENST00000487952 LINC00643Q86TS7 51 aa7.61□□□□□ -1.19
NUP188-207ENST00000487952 RPL37P61927 97 aaKnown RBP7.6□□□□□ -1.19
NUP188-207ENST00000487952 KRTAP16-1A8MUX0 517 aa7.59□□□□□ -1.19
NUP188-207ENST00000487952 Q75L30 129 aa7.59□□□□□ -1.19
NUP188-207ENST00000487952 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.19
NUP188-207ENST00000487952 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
NUP188-207ENST00000487952 hDV103S1A0JD37 113 aa7.57□□□□□ -1.2
NUP188-207ENST00000487952 A8MUU9 505 aa7.57□□□□□ -1.2
NUP188-207ENST00000487952 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
NUP188-207ENST00000487952 TMEM254Q8TBM7 123 aa7.56□□□□□ -1.2
NUP188-207ENST00000487952 ATP11AUNQ6ZP68 121 aa7.55□□□□□ -1.2
NUP188-207ENST00000487952 CASC2Q6XLA1 102 aa7.54□□□□□ -1.2
NUP188-207ENST00000487952 MRPL34Q9BQ48 92 aaKnown RBP7.54□□□□□ -1.2
NUP188-207ENST00000487952 HCG22E2RYF7 251 aa7.53□□□□□ -1.2
NUP188-207ENST00000487952 HIST1H4AP62805 103 aaKnown RBP7.53□□□□□ -1.2
NUP188-207ENST00000487952 PCOTHQ58A44 107 aa7.53□□□□□ -1.2
NUP188-207ENST00000487952 NDUFS5O43920 106 aa7.51□□□□□ -1.21
NUP188-207ENST00000487952 Q8N9P0 234 aaPredicted RBP7.51□□□□□ -1.21
NUP188-207ENST00000487952 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
NUP188-207ENST00000487952 ZCCHC13Q8WW36 166 aaKnown RBP7.45□□□□□ -1.22
NUP188-207ENST00000487952 A0A087WVE0 104 aa7.43□□□□□ -1.22
NUP188-207ENST00000487952 MUC17Q685J3 4493 aa7.42□□□□□ -1.22
NUP188-207ENST00000487952 MT-ATP8P03928 68 aa7.4□□□□□ -1.22
NUP188-207ENST00000487952 IMUPQ9GZP8 106 aa7.38□□□□□ -1.23
NUP188-207ENST00000487952 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
NUP188-207ENST00000487952 KRTAP4-1Q9BYQ7 146 aa7.37□□□□□ -1.23
NUP188-207ENST00000487952 RNF213Q63HN8 5207 aa7.33□□□□□ -1.24
NUP188-207ENST00000487952 SCGB1A1P11684 91 aa7.32□□□□□ -1.24
NUP188-207ENST00000487952 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
NUP188-207ENST00000487952 Q5W150 140 aa7.31□□□□□ -1.24
NUP188-207ENST00000487952 UQCRQO14949 82 aa7.29□□□□□ -1.24
NUP188-207ENST00000487952 SPINK7P58062 85 aa7.29□□□□□ -1.24
NUP188-207ENST00000487952 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.25
NUP188-207ENST00000487952 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
NUP188-207ENST00000487952 TRAV22A0A0B4J277 110 aa7.26□□□□□ -1.25
NUP188-207ENST00000487952 FAM236AA0A1B0GUQ0 79 aa7.26□□□□□ -1.25
NUP188-207ENST00000487952 FAM236BA0A1B0GV22 79 aa7.26□□□□□ -1.25
NUP188-207ENST00000487952 C7orf65Q6ZTY9 151 aa7.26□□□□□ -1.25
NUP188-207ENST00000487952 OCR1Q9BZK8 76 aa7.23□□□□□ -1.25
NUP188-207ENST00000487952 H0Y9P7 68 aa7.22□□□□□ -1.25
NUP188-207ENST00000487952 COX6B2Q6YFQ2 88 aa7.22□□□□□ -1.25
NUP188-207ENST00000487952 ATOX1O00244 68 aa7.21□□□□□ -1.26
NUP188-207ENST00000487952 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.26
NUP188-207ENST00000487952 MUC2Q02817 5179 aa7.21□□□□□ -1.26
NUP188-207ENST00000487952 HRES1P13985 223 aa7.2□□□□□ -1.26
NUP188-207ENST00000487952 SMIM20Q8N5G0 67 aa7.2□□□□□ -1.26
NUP188-207ENST00000487952 FAM236DA0A1B0GTK5 79 aa7.19□□□□□ -1.26
NUP188-207ENST00000487952 FAM236CP0DP71 79 aa7.19□□□□□ -1.26
NUP188-207ENST00000487952 MP68P56378 58 aa7.19□□□□□ -1.26
NUP188-207ENST00000487952 LOC101927531A0A1B0GV80 90 aa7.18□□□□□ -1.26
NUP188-207ENST00000487952 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
NUP188-207ENST00000487952 TRAV7A0A075B6U4 112 aa7.15□□□□□ -1.26
NUP188-207ENST00000487952 LINC00208Q96KT6 92 aa7.14□□□□□ -1.27
NUP188-207ENST00000487952 C1orf64Q8NEQ6 169 aa7.13□□□□□ -1.27
NUP188-207ENST00000487952 MPLKIPQ8TAP9 179 aa7.13□□□□□ -1.27
NUP188-207ENST00000487952 H3BPC8 53 aa7.12□□□□□ -1.27
NUP188-207ENST00000487952 KRTAP19-2Q3LHN2 52 aa7.12□□□□□ -1.27
NUP188-207ENST00000487952 CYP4F30PQ9H0H9 118 aa7.12□□□□□ -1.27
NUP188-207ENST00000487952 C4orf26Q17RF5 130 aa7.08□□□□□ -1.28
NUP188-207ENST00000487952 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
NUP188-207ENST00000487952 FAT4Q6V0I7 4981 aa7.06□□□□□ -1.28
NUP188-207ENST00000487952 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
NUP188-207ENST00000487952 M0R2T5 61 aa7□□□□□ -1.29
NUP188-207ENST00000487952 MT1HP80294 61 aa7□□□□□ -1.29
NUP188-207ENST00000487952 KLKP1Q107X0 134 aa6.99□□□□□ -1.29
NUP188-207ENST00000487952 H1FX-AS1Q4G0G2 97 aa6.99□□□□□ -1.29
NUP188-207ENST00000487952 LCE2AQ5TA79 106 aaPredicted RBP6.97□□□□□ -1.29
NUP188-207ENST00000487952 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
NUP188-207ENST00000487952 COX7CP15954 63 aa6.96□□□□□ -1.3
NUP188-207ENST00000487952 ANAPC13Q9BS18 74 aa6.96□□□□□ -1.3
NUP188-207ENST00000487952 SNURFQ9Y675 71 aa6.96□□□□□ -1.3
NUP188-207ENST00000487952 FLGP20930 4061 aaPredicted RBP6.94□□□□□ -1.3
NUP188-207ENST00000487952 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
NUP188-207ENST00000487952 A8MUN3 132 aa6.9□□□□□ -1.3
NUP188-207ENST00000487952 S4R3F8 94 aa6.87□□□□□ -1.31
NUP188-207ENST00000487952 NDUFC1O43677 76 aa6.82□□□□□ -1.32
NUP188-207ENST00000487952 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
NUP188-207ENST00000487952 DMAC1Q96GE9 116 aa6.82□□□□□ -1.32
NUP188-207ENST00000487952 SPANXA2-OT1Q8N9U9 137 aa6.8□□□□□ -1.32
NUP188-207ENST00000487952 LCA10Q71F78 164 aa6.79□□□□□ -1.32
NUP188-207ENST00000487952 ACYP2P14621 99 aa6.77□□□□□ -1.33
NUP188-207ENST00000487952 CSAG1Q6PB30 78 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms