RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TRBV20-1A0A075B6N2 111 aa10.49□□□□□ -0.73
HDAC4-209ENST00000487617 KRTAP9-6A0A140TA67 174 aa10.49□□□□□ -0.73
HDAC4-209ENST00000487617 A0A1B0GVX0 72 aa10.49□□□□□ -0.73
HDAC4-209ENST00000487617 C8orf87E5RJ46 101 aa10.49□□□□□ -0.73
HDAC4-209ENST00000487617 J3KT08 172 aa10.48□□□□□ -0.73
HDAC4-209ENST00000487617 LOC110117498A0A087WWA1 95 aa10.46□□□□□ -0.73
HDAC4-209ENST00000487617 LOC105371267A0A1B0GV96 52 aa10.44□□□□□ -0.74
HDAC4-209ENST00000487617 PDE6GP18545 87 aa10.44□□□□□ -0.74
HDAC4-209ENST00000487617 C14orf132Q9NPU4 83 aa10.43□□□□□ -0.74
HDAC4-209ENST00000487617 A0A1B0GW54 56 aa10.42□□□□□ -0.74
HDAC4-209ENST00000487617 FLGP20930 4061 aaPredicted RBP10.42□□□□□ -0.74
HDAC4-209ENST00000487617 NDUFB1O75438 58 aa10.4□□□□□ -0.74
HDAC4-209ENST00000487617 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
HDAC4-209ENST00000487617 TAX1BP3O14907 124 aa10.35□□□□□ -0.75
HDAC4-209ENST00000487617 A8MWP4 228 aa10.34□□□□□ -0.75
HDAC4-209ENST00000487617 FAM236DA0A1B0GTK5 79 aa10.33□□□□□ -0.76
HDAC4-209ENST00000487617 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
HDAC4-209ENST00000487617 FAM236CP0DP71 79 aa10.33□□□□□ -0.76
HDAC4-209ENST00000487617 H3BT86 120 aa10.31□□□□□ -0.76
HDAC4-209ENST00000487617 HRES1P13985 223 aa10.31□□□□□ -0.76
HDAC4-209ENST00000487617 NREPQ16612 68 aa10.31□□□□□ -0.76
HDAC4-209ENST00000487617 ZCCHC13Q8WW36 166 aaKnown RBP10.31□□□□□ -0.76
HDAC4-209ENST00000487617 C8orf17Q9NRJ1 99 aa10.31□□□□□ -0.76
HDAC4-209ENST00000487617 RBM12B-AS1Q9P1G2 102 aa10.31□□□□□ -0.76
HDAC4-209ENST00000487617 IGKV3D-7A0A0C4DH55 119 aa10.3□□□□□ -0.76
HDAC4-209ENST00000487617 MTURNQ8N3F0 131 aa10.3□□□□□ -0.76
HDAC4-209ENST00000487617 Q8N9P0 234 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-209ENST00000487617 CRCT1Q9UGL9 99 aa10.28□□□□□ -0.76
HDAC4-209ENST00000487617 MPLKIPQ8TAP9 179 aa10.27□□□□□ -0.77
HDAC4-209ENST00000487617 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
HDAC4-209ENST00000487617 FSIP2Q5CZC0 6907 aa10.25□□□□□ -0.77
HDAC4-209ENST00000487617 Q6ZVQ6 151 aa10.23□□□□□ -0.77
HDAC4-209ENST00000487617 SPINK7P58062 85 aa10.21□□□□□ -0.77
HDAC4-209ENST00000487617 SPCS1Q9Y6A9 102 aa10.2□□□□□ -0.78
HDAC4-209ENST00000487617 KRTAP9-8Q9BYQ0 159 aa10.17□□□□□ -0.78
HDAC4-209ENST00000487617 MMP24-AS1A0A0U1RRL7 71 aa10.16□□□□□ -0.78
HDAC4-209ENST00000487617 K7EQZ3 153 aa10.14□□□□□ -0.79
HDAC4-209ENST00000487617 TMEM254Q8TBM7 123 aa10.14□□□□□ -0.79
HDAC4-209ENST00000487617 MRPL34Q9BQ48 92 aaKnown RBP10.14□□□□□ -0.79
HDAC4-209ENST00000487617 BPY2O14599 106 aa10.12□□□□□ -0.79
HDAC4-209ENST00000487617 COL5A1-AS1Q5SY13 56 aa10.12□□□□□ -0.79
HDAC4-209ENST00000487617 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
HDAC4-209ENST00000487617 SMCPP49901 116 aaPredicted RBP10.1□□□□□ -0.79
HDAC4-209ENST00000487617 NDUFS5O43920 106 aa10.08□□□□□ -0.8
HDAC4-209ENST00000487617 WFDC13Q8IUB5 93 aa10.08□□□□□ -0.8
HDAC4-209ENST00000487617 MT2AP02795 61 aa10.03□□□□□ -0.8
HDAC4-209ENST00000487617 K7EP34 96 aa10.02□□□□□ -0.81
HDAC4-209ENST00000487617 PRO0461Q9UI25 63 aa10.02□□□□□ -0.81
HDAC4-209ENST00000487617 Q8N9L7 120 aa10.01□□□□□ -0.81
HDAC4-209ENST00000487617 CASC2Q6XLA1 102 aa9.97□□□□□ -0.81
HDAC4-209ENST00000487617 MT1FP04733 61 aa9.96□□□□□ -0.82
HDAC4-209ENST00000487617 UBL5Q9BZL1 73 aa9.96□□□□□ -0.82
HDAC4-209ENST00000487617 LINC00846Q9NV44 126 aa9.96□□□□□ -0.82
HDAC4-209ENST00000487617 KRTAP10-10P60014 251 aa9.94□□□□□ -0.82
HDAC4-209ENST00000487617 Q5W150 140 aa9.93□□□□□ -0.82
HDAC4-209ENST00000487617 IGKV2D-30A0A075B6S6 120 aa9.92□□□□□ -0.82
HDAC4-209ENST00000487617 HCG22E2RYF7 251 aa9.92□□□□□ -0.82
HDAC4-209ENST00000487617 IGKV2-30P06310 120 aa9.92□□□□□ -0.82
HDAC4-209ENST00000487617 GTF2H5Q6ZYL4 71 aa9.91□□□□□ -0.82
HDAC4-209ENST00000487617 PCP4L1A6NKN8 68 aa9.9□□□□□ -0.82
HDAC4-209ENST00000487617 C7orf65Q6ZTY9 151 aa9.88□□□□□ -0.83
HDAC4-209ENST00000487617 H1FX-AS1Q4G0G2 97 aa9.85□□□□□ -0.83
HDAC4-209ENST00000487617 KRTAP9-3Q9BYQ3 159 aa9.85□□□□□ -0.83
HDAC4-209ENST00000487617 CXCL6P80162 114 aa9.84□□□□□ -0.83
HDAC4-209ENST00000487617 F8W1H4 67 aa9.83□□□□□ -0.84
HDAC4-209ENST00000487617 ETDBQ3ZM63 59 aa9.8□□□□□ -0.84
HDAC4-209ENST00000487617 LCE2BO14633 110 aa9.79□□□□□ -0.84
HDAC4-209ENST00000487617 USH2AO75445 5202 aa9.74□□□□□ -0.85
HDAC4-209ENST00000487617 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
HDAC4-209ENST00000487617 TP53AIP1Q9HCN2 124 aa9.66□□□□□ -0.86
HDAC4-209ENST00000487617 SSPOA2VEC9 5147 aa9.64□□□□□ -0.87
HDAC4-209ENST00000487617 KRTAP19-1Q8IUB9 90 aa9.63□□□□□ -0.87
HDAC4-209ENST00000487617 ACYP1P07311 99 aa9.58□□□□□ -0.88
HDAC4-209ENST00000487617 KRTAP3-1Q9BYR8 98 aa9.57□□□□□ -0.88
HDAC4-209ENST00000487617 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.56□□□□□ -0.88
HDAC4-209ENST00000487617 C1orf64Q8NEQ6 169 aa9.56□□□□□ -0.88
HDAC4-209ENST00000487617 C5orf47Q569G3 176 aa9.54□□□□□ -0.88
HDAC4-209ENST00000487617 FAM240AA0A1B0GVK7 77 aa9.52□□□□□ -0.89
HDAC4-209ENST00000487617 S4R3F8 94 aa9.52□□□□□ -0.89
HDAC4-209ENST00000487617 ATP5EP2Q5VTU8 51 aa9.49□□□□□ -0.89
HDAC4-209ENST00000487617 HIST1H4AP62805 103 aaKnown RBP9.46□□□□□ -0.9
HDAC4-209ENST00000487617 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.9
HDAC4-209ENST00000487617 FCGBPQ9Y6R7 5405 aaPredicted RBP9.46□□□□□ -0.9
HDAC4-209ENST00000487617 TRAV22A0A0B4J277 110 aa9.45□□□□□ -0.9
HDAC4-209ENST00000487617 KRTAP19-6Q3LI70 58 aa9.44□□□□□ -0.9
HDAC4-209ENST00000487617 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
HDAC4-209ENST00000487617 LCA10Q71F78 164 aa9.44□□□□□ -0.9
HDAC4-209ENST00000487617 KRTAP9-7A8MTY7 169 aa9.43□□□□□ -0.9
HDAC4-209ENST00000487617 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
HDAC4-209ENST00000487617 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
HDAC4-209ENST00000487617 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
HDAC4-209ENST00000487617 UQCRQO14949 82 aa9.38□□□□□ -0.91
HDAC4-209ENST00000487617 LINC00643Q86TS7 51 aa9.36□□□□□ -0.91
HDAC4-209ENST00000487617 A0A1B0GV90 55 aa9.33□□□□□ -0.92
HDAC4-209ENST00000487617 H0Y9P7 68 aa9.33□□□□□ -0.92
HDAC4-209ENST00000487617 A0A087WVE0 104 aa9.32□□□□□ -0.92
HDAC4-209ENST00000487617 ATOX1O00244 68 aa9.31□□□□□ -0.92
HDAC4-209ENST00000487617 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
HDAC4-209ENST00000487617 KLKP1Q107X0 134 aa9.21□□□□□ -0.94
HDAC4-209ENST00000487617 SPRR2GQ9BYE4 73 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms