RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 BAALC-AS2P0C853 105 aa11.83□□□□□ -0.52
PLOD3-215ENST00000487563 HRES1P13985 223 aa11.83□□□□□ -0.52
PLOD3-215ENST00000487563 C21orf62-AS1Q17RA5 79 aa11.83□□□□□ -0.52
PLOD3-215ENST00000487563 J3KT08 172 aa11.81□□□□□ -0.52
PLOD3-215ENST00000487563 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
PLOD3-215ENST00000487563 NDUFB1O75438 58 aa11.74□□□□□ -0.53
PLOD3-215ENST00000487563 Q6ZQT0 140 aa11.74□□□□□ -0.53
PLOD3-215ENST00000487563 ZCCHC13Q8WW36 166 aaKnown RBP11.74□□□□□ -0.53
PLOD3-215ENST00000487563 ATXN8Q156A1 80 aa11.72□□□□□ -0.53
PLOD3-215ENST00000487563 MTURNQ8N3F0 131 aa11.72□□□□□ -0.53
PLOD3-215ENST00000487563 M0R143 59 aa11.71□□□□□ -0.53
PLOD3-215ENST00000487563 MT2AP02795 61 aa11.71□□□□□ -0.53
PLOD3-215ENST00000487563 JMJD7-PLA2G4BH0Y9G9 81 aa11.69□□□□□ -0.54
PLOD3-215ENST00000487563 NAA38Q9BRA0 125 aaKnown RBP11.69□□□□□ -0.54
PLOD3-215ENST00000487563 SPINK7P58062 85 aa11.66□□□□□ -0.54
PLOD3-215ENST00000487563 LYRM7Q5U5X0 104 aa11.65□□□□□ -0.54
PLOD3-215ENST00000487563 LOC110117498A0A087WWA1 95 aa11.63□□□□□ -0.55
PLOD3-215ENST00000487563 A0A1B0GW54 56 aa11.63□□□□□ -0.55
PLOD3-215ENST00000487563 A8MWP4 228 aa11.63□□□□□ -0.55
PLOD3-215ENST00000487563 Q8N9P0 234 aaPredicted RBP11.63□□□□□ -0.55
PLOD3-215ENST00000487563 C8orf17Q9NRJ1 99 aa11.63□□□□□ -0.55
PLOD3-215ENST00000487563 USH2AO75445 5202 aa11.63□□□□□ -0.55
PLOD3-215ENST00000487563 MT1FP04733 61 aa11.62□□□□□ -0.55
PLOD3-215ENST00000487563 PDE6GP18545 87 aa11.62□□□□□ -0.55
PLOD3-215ENST00000487563 KRTAP10-10P60014 251 aa11.61□□□□□ -0.55
PLOD3-215ENST00000487563 C14orf132Q9NPU4 83 aa11.59□□□□□ -0.55
PLOD3-215ENST00000487563 IGKV3D-7A0A0C4DH55 119 aa11.57□□□□□ -0.56
PLOD3-215ENST00000487563 SSPOA2VEC9 5147 aa11.55□□□□□ -0.56
PLOD3-215ENST00000487563 Q6ZVQ6 151 aa11.54□□□□□ -0.56
PLOD3-215ENST00000487563 WFDC13Q8IUB5 93 aa11.54□□□□□ -0.56
PLOD3-215ENST00000487563 NREPQ16612 68 aa11.52□□□□□ -0.57
PLOD3-215ENST00000487563 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.5□□□□□ -0.57
PLOD3-215ENST00000487563 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
PLOD3-215ENST00000487563 KRTAP9-3Q9BYQ3 159 aa11.5□□□□□ -0.57
PLOD3-215ENST00000487563 LCE2BO14633 110 aa11.49□□□□□ -0.57
PLOD3-215ENST00000487563 SMIM6P0DI80 62 aa11.48□□□□□ -0.57
PLOD3-215ENST00000487563 BATFQ16520 125 aa11.46□□□□□ -0.57
PLOD3-215ENST00000487563 TMEM254Q8TBM7 123 aa11.43□□□□□ -0.58
PLOD3-215ENST00000487563 MRPL34Q9BQ48 92 aaKnown RBP11.43□□□□□ -0.58
PLOD3-215ENST00000487563 MMP24-AS1A0A0U1RRL7 71 aa11.42□□□□□ -0.58
PLOD3-215ENST00000487563 KRTAP9-7A8MTY7 169 aa11.42□□□□□ -0.58
PLOD3-215ENST00000487563 TSTD3H0UI37 97 aa11.41□□□□□ -0.58
PLOD3-215ENST00000487563 NDUFS5O43920 106 aa11.39□□□□□ -0.59
PLOD3-215ENST00000487563 KRTAP19-1Q8IUB9 90 aa11.39□□□□□ -0.59
PLOD3-215ENST00000487563 hDV103S1A0JD37 113 aa11.37□□□□□ -0.59
PLOD3-215ENST00000487563 K7EQZ3 153 aa11.36□□□□□ -0.59
PLOD3-215ENST00000487563 H3BT86 120 aa11.35□□□□□ -0.59
PLOD3-215ENST00000487563 FCGBPQ9Y6R7 5405 aaPredicted RBP11.34□□□□□ -0.59
PLOD3-215ENST00000487563 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
PLOD3-215ENST00000487563 BPY2O14599 106 aa11.3□□□□□ -0.6
PLOD3-215ENST00000487563 A0A1W2PPM0 123 aa11.27□□□□□ -0.61
PLOD3-215ENST00000487563 H1FX-AS1Q4G0G2 97 aa11.27□□□□□ -0.61
PLOD3-215ENST00000487563 IGKV2D-30A0A075B6S6 120 aa11.26□□□□□ -0.61
PLOD3-215ENST00000487563 IGKV2-30P06310 120 aa11.26□□□□□ -0.61
PLOD3-215ENST00000487563 LINC00846Q9NV44 126 aa11.24□□□□□ -0.61
PLOD3-215ENST00000487563 TAX1BP3O14907 124 aa11.23□□□□□ -0.61
PLOD3-215ENST00000487563 C7orf65Q6ZTY9 151 aa11.22□□□□□ -0.61
PLOD3-215ENST00000487563 CASC2Q6XLA1 102 aa11.17□□□□□ -0.62
PLOD3-215ENST00000487563 Q8N9L7 120 aa11.17□□□□□ -0.62
PLOD3-215ENST00000487563 Q5W150 140 aa11.16□□□□□ -0.62
PLOD3-215ENST00000487563 HCG22E2RYF7 251 aa11.14□□□□□ -0.63
PLOD3-215ENST00000487563 KRTAP19-6Q3LI70 58 aa11.13□□□□□ -0.63
PLOD3-215ENST00000487563 SPCS1Q9Y6A9 102 aa11.12□□□□□ -0.63
PLOD3-215ENST00000487563 MACF1Q9UPN3 7388 aaKnown RBP11.07□□□□□ -0.64
PLOD3-215ENST00000487563 CXCL6P80162 114 aa11.06□□□□□ -0.64
PLOD3-215ENST00000487563 C4orf26Q17RF5 130 aa11.05□□□□□ -0.64
PLOD3-215ENST00000487563 LOC105371267A0A1B0GV96 52 aa11.04□□□□□ -0.64
PLOD3-215ENST00000487563 SMCPP49901 116 aaPredicted RBP11.02□□□□□ -0.65
PLOD3-215ENST00000487563 UBL5Q9BZL1 73 aa11.02□□□□□ -0.65
PLOD3-215ENST00000487563 SYNE2Q8WXH0 6885 aaKnown RBP10.93□□□□□ -0.66
PLOD3-215ENST00000487563 COL5A1-AS1Q5SY13 56 aa10.92□□□□□ -0.66
PLOD3-215ENST00000487563 C5orf47Q569G3 176 aa10.91□□□□□ -0.66
PLOD3-215ENST00000487563 PRO0461Q9UI25 63 aa10.9□□□□□ -0.66
PLOD3-215ENST00000487563 K7EP34 96 aa10.88□□□□□ -0.67
PLOD3-215ENST00000487563 FAM236AA0A1B0GUQ0 79 aa10.87□□□□□ -0.67
PLOD3-215ENST00000487563 FAM236BA0A1B0GV22 79 aa10.87□□□□□ -0.67
PLOD3-215ENST00000487563 S4R3F8 94 aa10.86□□□□□ -0.67
PLOD3-215ENST00000487563 C1orf64Q8NEQ6 169 aa10.83□□□□□ -0.68
PLOD3-215ENST00000487563 KRTAP3-1Q9BYR8 98 aa10.81□□□□□ -0.68
PLOD3-215ENST00000487563 TP53AIP1Q9HCN2 124 aa10.8□□□□□ -0.68
PLOD3-215ENST00000487563 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
PLOD3-215ENST00000487563 GTF2H5Q6ZYL4 71 aa10.74□□□□□ -0.69
PLOD3-215ENST00000487563 LCA10Q71F78 164 aa10.74□□□□□ -0.69
PLOD3-215ENST00000487563 KRTAP6-3Q3LI67 103 aa10.7□□□□□ -0.7
PLOD3-215ENST00000487563 F8W1H4 67 aa10.66□□□□□ -0.7
PLOD3-215ENST00000487563 ETDBQ3ZM63 59 aa10.66□□□□□ -0.7
PLOD3-215ENST00000487563 Q5VV11 94 aa10.66□□□□□ -0.7
PLOD3-215ENST00000487563 A6NN06 94 aa10.62□□□□□ -0.71
PLOD3-215ENST00000487563 SPRR2GQ9BYE4 73 aa10.61□□□□□ -0.71
PLOD3-215ENST00000487563 MT1BP07438 61 aa10.6□□□□□ -0.71
PLOD3-215ENST00000487563 CYP4F30PQ9H0H9 118 aa10.59□□□□□ -0.71
PLOD3-215ENST00000487563 KLKP1Q107X0 134 aa10.57□□□□□ -0.72
PLOD3-215ENST00000487563 KRTAP19-8Q3LI54 63 aa10.56□□□□□ -0.72
PLOD3-215ENST00000487563 TRAV22A0A0B4J277 110 aa10.55□□□□□ -0.72
PLOD3-215ENST00000487563 LOC101927531A0A1B0GV80 90 aa10.53□□□□□ -0.72
PLOD3-215ENST00000487563 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
PLOD3-215ENST00000487563 PCP4L1A6NKN8 68 aa10.51□□□□□ -0.73
PLOD3-215ENST00000487563 A0A087WVE0 104 aa10.45□□□□□ -0.74
PLOD3-215ENST00000487563 ACYP1P07311 99 aa10.45□□□□□ -0.74
PLOD3-215ENST00000487563 KRTAP10-5P60370 271 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms