RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 A6NN06 94 aa7.04□□□□□ -1.28
MCF2L-228ENST00000487354 ORMDL1Q9P0S3 153 aa7.02□□□□□ -1.29
MCF2L-228ENST00000487354 H1FX-AS1Q4G0G2 97 aa7.01□□□□□ -1.29
MCF2L-228ENST00000487354 C2orf91Q6ZV80 131 aa7.01□□□□□ -1.29
MCF2L-228ENST00000487354 HIGD1BQ9P298 99 aa7□□□□□ -1.29
MCF2L-228ENST00000487354 PRO1854Q9UHT4 67 aa6.99□□□□□ -1.29
MCF2L-228ENST00000487354 C14orf144Q96I85 54 aa6.97□□□□□ -1.29
MCF2L-228ENST00000487354 TMEM256-PLSCR3K7ERE1 68 aa6.96□□□□□ -1.3
MCF2L-228ENST00000487354 S100A2P29034 98 aa6.96□□□□□ -1.3
MCF2L-228ENST00000487354 H3BQ85 93 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 J3KT08 172 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 DNAL4O96015 105 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 FXYD2P54710 66 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 KRTAP10-5P60370 271 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 CEND1Q8N111 149 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 C8orf17Q9NRJ1 99 aa6.95□□□□□ -1.3
MCF2L-228ENST00000487354 UBE2V1Q13404 147 aa6.94□□□□□ -1.3
MCF2L-228ENST00000487354 KRTAP19-8Q3LI54 63 aa6.94□□□□□ -1.3
MCF2L-228ENST00000487354 IGKV3D-7A0A0C4DH55 119 aa6.92□□□□□ -1.3
MCF2L-228ENST00000487354 LYRM7Q5U5X0 104 aa6.9□□□□□ -1.3
MCF2L-228ENST00000487354 Q5VV11 94 aa6.9□□□□□ -1.3
MCF2L-228ENST00000487354 Q6ZQT0 140 aa6.9□□□□□ -1.3
MCF2L-228ENST00000487354 KRTAP2-3P0C7H8 128 aa6.88□□□□□ -1.31
MCF2L-228ENST00000487354 Q6ZVQ6 151 aa6.88□□□□□ -1.31
MCF2L-228ENST00000487354 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
MCF2L-228ENST00000487354 KRTAP2-4Q9BYR9 128 aa6.88□□□□□ -1.31
MCF2L-228ENST00000487354 TMEM238LA0A1B0GVL6 79 aa6.87□□□□□ -1.31
MCF2L-228ENST00000487354 A6NJY4 79 aa6.87□□□□□ -1.31
MCF2L-228ENST00000487354 K7ERJ3 54 aa6.87□□□□□ -1.31
MCF2L-228ENST00000487354 NDUFB1O75438 58 aa6.87□□□□□ -1.31
MCF2L-228ENST00000487354 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
MCF2L-228ENST00000487354 PAM16Q9Y3D7 125 aa6.87□□□□□ -1.31
MCF2L-228ENST00000487354 S100A1P23297 94 aa6.86□□□□□ -1.31
MCF2L-228ENST00000487354 SPATA45Q537H7 98 aa6.86□□□□□ -1.31
MCF2L-228ENST00000487354 DSCR8Q96T75 97 aa6.86□□□□□ -1.31
MCF2L-228ENST00000487354 PSMB2P49721 201 aa6.83□□□□□ -1.32
MCF2L-228ENST00000487354 MMP24-AS1A0A0U1RRL7 71 aa6.82□□□□□ -1.32
MCF2L-228ENST00000487354 C21orf62-AS1Q17RA5 79 aa6.81□□□□□ -1.32
MCF2L-228ENST00000487354 PRR15Q8IV56 129 aa6.8□□□□□ -1.32
MCF2L-228ENST00000487354 C9JAW5 83 aa6.79□□□□□ -1.32
MCF2L-228ENST00000487354 TMEM254Q8TBM7 123 aa6.79□□□□□ -1.32
MCF2L-228ENST00000487354 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
MCF2L-228ENST00000487354 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
MCF2L-228ENST00000487354 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
MCF2L-228ENST00000487354 S100A6P06703 90 aa6.78□□□□□ -1.32
MCF2L-228ENST00000487354 COX6CP09669 75 aa6.78□□□□□ -1.32
MCF2L-228ENST00000487354 IGKV2D-30A0A075B6S6 120 aa6.77□□□□□ -1.33
MCF2L-228ENST00000487354 IGKV2-30P06310 120 aa6.77□□□□□ -1.33
MCF2L-228ENST00000487354 C5orf47Q569G3 176 aa6.77□□□□□ -1.33
MCF2L-228ENST00000487354 Q5W150 140 aa6.77□□□□□ -1.33
MCF2L-228ENST00000487354 VAMP8Q9BV40 100 aa6.76□□□□□ -1.33
MCF2L-228ENST00000487354 C7orf65Q6ZTY9 151 aa6.74□□□□□ -1.33
MCF2L-228ENST00000487354 HSD52Q0P140 79 aa6.73□□□□□ -1.33
MCF2L-228ENST00000487354 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
MCF2L-228ENST00000487354 BAALC-AS2P0C853 105 aa6.71□□□□□ -1.34
MCF2L-228ENST00000487354 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.34
MCF2L-228ENST00000487354 LOC110117498A0A087WWA1 95 aa6.7□□□□□ -1.34
MCF2L-228ENST00000487354 A0A1B0GW54 56 aa6.7□□□□□ -1.34
MCF2L-228ENST00000487354 hDV103S1A0JD37 113 aa6.69□□□□□ -1.34
MCF2L-228ENST00000487354 SPRR2EP22531 72 aa6.69□□□□□ -1.34
MCF2L-228ENST00000487354 SPRR2BP35325 72 aa6.69□□□□□ -1.34
MCF2L-228ENST00000487354 SPRR2AP35326 72 aa6.69□□□□□ -1.34
MCF2L-228ENST00000487354 K7EQZ3 153 aa6.68□□□□□ -1.34
MCF2L-228ENST00000487354 NDUFS5O43920 106 aa6.68□□□□□ -1.34
MCF2L-228ENST00000487354 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
MCF2L-228ENST00000487354 SPRR2FQ96RM1 72 aa6.68□□□□□ -1.34
MCF2L-228ENST00000487354 KLKP1Q107X0 134 aa6.65□□□□□ -1.34
MCF2L-228ENST00000487354 LCA10Q71F78 164 aa6.64□□□□□ -1.35
MCF2L-228ENST00000487354 S4R3F8 94 aa6.64□□□□□ -1.35
MCF2L-228ENST00000487354 SCGB1C2P0DMR2 95 aa6.63□□□□□ -1.35
MCF2L-228ENST00000487354 KRTAP2-2Q9BYT5 123 aa6.63□□□□□ -1.35
MCF2L-228ENST00000487354 KRTAP2-1Q9BYU5 128 aa6.63□□□□□ -1.35
MCF2L-228ENST00000487354 JMJD7-PLA2G4BH0Y9G9 81 aa6.62□□□□□ -1.35
MCF2L-228ENST00000487354 C14orf132Q9NPU4 83 aa6.62□□□□□ -1.35
MCF2L-228ENST00000487354 NREPQ16612 68 aa6.61□□□□□ -1.35
MCF2L-228ENST00000487354 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
MCF2L-228ENST00000487354 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
MCF2L-228ENST00000487354 TMA7Q9Y2S6 64 aaKnown RBP6.59□□□□□ -1.35
MCF2L-228ENST00000487354 PDE6GP18545 87 aa6.58□□□□□ -1.36
MCF2L-228ENST00000487354 IMUPQ9GZP8 106 aa6.58□□□□□ -1.36
MCF2L-228ENST00000487354 KRTAP3-3Q9BYR6 98 aa6.56□□□□□ -1.36
MCF2L-228ENST00000487354 HCG22E2RYF7 251 aa6.53□□□□□ -1.36
MCF2L-228ENST00000487354 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
MCF2L-228ENST00000487354 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
MCF2L-228ENST00000487354 C1orf64Q8NEQ6 169 aa6.51□□□□□ -1.37
MCF2L-228ENST00000487354 Q8N9L7 120 aa6.5□□□□□ -1.37
MCF2L-228ENST00000487354 MT1XP80297 61 aa6.49□□□□□ -1.37
MCF2L-228ENST00000487354 CASC2Q6XLA1 102 aa6.49□□□□□ -1.37
MCF2L-228ENST00000487354 NAA38Q9BRA0 125 aaKnown RBP6.49□□□□□ -1.37
MCF2L-228ENST00000487354 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
MCF2L-228ENST00000487354 KRTAP8-1Q8IUC2 63 aa6.48□□□□□ -1.37
MCF2L-228ENST00000487354 UQCR10Q9UDW1 63 aa6.48□□□□□ -1.37
MCF2L-228ENST00000487354 SPRR2DP22532 72 aa6.47□□□□□ -1.37
MCF2L-228ENST00000487354 CXCL6P80162 114 aa6.47□□□□□ -1.37
MCF2L-228ENST00000487354 LOC105371267A0A1B0GV96 52 aa6.46□□□□□ -1.38
MCF2L-228ENST00000487354 BPY2O14599 106 aa6.46□□□□□ -1.38
MCF2L-228ENST00000487354 A0A087WVE0 104 aa6.42□□□□□ -1.38
MCF2L-228ENST00000487354 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
MCF2L-228ENST00000487354 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 732 ms